Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p23160 Brassica napus HOM05D000311 ORTHO05D018764 1.2e-93 347.1 266 100.0
BolC2t08458H Brassica oleracea HOM05D000311 ORTHO05D018764 1.5e-67 260.4 233 85.4
BcaB05g24841 Brassica carinata HOM05D000311 ORTHO05D000183 6.7e-23 112.1 228 68.4
BolC2t09198H Brassica oleracea HOM05D000311 ORTHO05D000183 4.2e-17 92.8 264 50.8
BcaC05g24568 Brassica carinata HOM05D000311 ORTHO05D000183 4.7e-16 89.4 124 55.6
CARHR067560 Cardamine hirsuta HOM05D000311 ORTHO05D000183 2.3e-15 87.0 81 79.0
Carub.0004s0512 Capsella rubella HOM05D000311 ORTHO05D000183 1.3e-13 81.3 269 52.8
CARHR218490 Cardamine hirsuta HOM05D000311 ORTHO05D000183 2.8e-13 80.1 279 49.1
BcaC03g15487 Brassica carinata HOM05D000311 ORTHO05D000183 1.4e-12 77.8 133 44.4
Thhalv10000563m.g Eutrema salsugineum HOM05D000311 ORTHO05D000183 9.1e-12 75.1 100 45.0
BolC6t38470H Brassica oleracea HOM05D000311 ORTHO05D000183 5.9e-11 72.4 263 55.9
A02p19170 Brassica napus HOM05D000311 ORTHO05D000183 1.0e-10 71.6 148 46.6
BraA06t24597Z Brassica rapa HOM05D000311 ORTHO05D000183 1.3e-10 71.2 167 41.9
C06p33550 Brassica napus HOM05D000311 ORTHO05D000183 3.8e-10 69.7 291 48.5
Sp5g29380 Schrenkiella parvula HOM05D000311 ORTHO05D000183 3.8e-10 69.7 253 54.2
C06p33570 Brassica napus HOM05D000311 ORTHO05D000183 5.0e-10 69.3 260 55.4
BolC6t39866H Brassica oleracea HOM05D000311 ORTHO05D000183 8.5e-10 68.6 296 50.7
BcaC08g46821 Brassica carinata HOM05D000311 ORTHO05D000183 1.5e-09 67.8 236 56.8
BcaB03g15370 Brassica carinata HOM05D000311 ORTHO05D000183 4.2e-09 66.2 274 47.4
BcaC08g46848 Brassica carinata HOM05D000311 ORTHO05D000183 4.2e-09 66.2 280 47.1
C02p31700 Brassica napus HOM05D000311 ORTHO05D000183 5.5e-09 65.9 289 44.3
BraA07t30498Z Brassica rapa HOM05D000311 ORTHO05D018764 7.2e-09 65.5 102 54.9
CARHR067420 Cardamine hirsuta HOM05D000311 ORTHO05D000183 7.2e-09 65.5 251 50.6
BcaNung00102 Brassica carinata HOM05D000311 ORTHO05D000183 9.4e-09 65.1 179 29.6
AT1G74190 Arabidopsis thaliana HOM05D000311 ORTHO05D000183 2.1e-08 63.9 199 39.2
C02p31660 Brassica napus HOM05D000311 ORTHO05D018764 4.7e-08 62.8 43 69.8
AT1G74180 Arabidopsis thaliana HOM05D000311 ORTHO05D000183 6.1e-08 62.4 273 48.4
AUR62011497 Chenopodium quinoa HOM05D000311 ORTHO05D000183 1.8e-07 60.8 139 42.4
BcaB02g07056 Brassica carinata HOM05D000311 ORTHO05D000183 2.3e-07 60.5 142 46.5
A06p14740 Brassica napus HOM05D000311 ORTHO05D000183 3.0e-07 60.1 106 53.8
CSS0038036 Camellia sinensis var. sinensis HOM05D000071 ORTHO05D000029 3.0e-07 60.1 162 32.7
Carub.0002s1339 Capsella rubella HOM05D000311 ORTHO05D000183 4.0e-07 59.7 260 47.3
Gorai.007G338400 Gossypium raimondii HOM05D000071 ORTHO05D000029 8.8e-07 58.5 176 29.0
AT1G74170 Arabidopsis thaliana HOM05D000311 ORTHO05D000183 2.6e-06 57.0 252 42.1
BcaB05g24837 Brassica carinata HOM05D000311 ORTHO05D000183 2.6e-06 57.0 126 64.3
BolC2t09204H Brassica oleracea HOM05D000094 ORTHO05D003883 2.6e-06 57.0 229 50.7
CARHR060140 Cardamine hirsuta HOM05D000311 ORTHO05D000183 2.6e-06 57.0 231 54.1
QL03p054080 Quercus lobata HOM05D000071 ORTHO05D000029 2.6e-06 57.0 165 32.1
C06p32140 Brassica napus HOM05D000311 ORTHO05D000183 3.3e-06 56.6 70 51.4
BolC6t38339H Brassica oleracea HOM05D000311 ORTHO05D000183 3.3e-06 56.6 70 51.4
Thhalv10018082m.g Eutrema salsugineum HOM05D000311 ORTHO05D000183 3.3e-06 56.6 278 48.9
Gorai.007G338300 Gossypium raimondii HOM05D000071 ORTHO05D000029 3.3e-06 56.6 161 36.6
C06p33590 Brassica napus HOM05D000311 ORTHO05D000183 4.4e-06 56.2 110 48.2
Phvul.008G079700 Phaseolus vulgaris HOM05D000071 ORTHO05D000029 4.4e-06 56.2 159 32.7
QL03p053807 Quercus lobata HOM05D000071 ORTHO05D000029 4.4e-06 56.2 159 31.4
QL05p023770 Quercus lobata HOM05D000071 ORTHO05D000029 4.4e-06 56.2 164 30.5
Thhalv10018087m.g Eutrema salsugineum HOM05D000311 ORTHO05D000183 5.7e-06 55.8 128 50.8
Gohir.D11G308225 Gossypium hirsutum HOM05D000071 ORTHO05D000029 5.7e-06 55.8 155 29.7
AL2G34080 Arabidopsis lyrata HOM05D000311 ORTHO05D000183 7.5e-06 55.5 199 36.2
A07p40030 Brassica napus HOM05D000311 ORTHO05D000183 7.5e-06 55.5 160 43.1
C06p38520 Brassica napus HOM05D000311 ORTHO05D000183 7.5e-06 55.5 170 61.2
Thhalv10018202m.g Eutrema salsugineum HOM05D000311 ORTHO05D000183 7.5e-06 55.5 278 50.4


User provided reference genes

Program Settings