Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p24450 Brassica napus HOM05D007179 ORTHO05D009124 1.0e-85 320.1 168 100.0
A01p19410 Brassica napus HOM05D007179 ORTHO05D009124 2.1e-75 285.8 161 93.2
BraA01t01881Z Brassica rapa HOM05D007179 ORTHO05D009124 2.1e-75 285.8 161 93.2
BcaNung01603 Brassica carinata HOM05D007179 ORTHO05D009124 7.1e-71 270.8 169 85.2
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 2.5e-63 245.7 169 81.7
Sp7g25970 Schrenkiella parvula HOM05D007179 ORTHO05D009124 4.6e-62 241.5 162 82.7
BolC1t02394H Brassica oleracea HOM05D007179 ORTHO05D009124 6.1e-62 241.1 125 100.0
BraA03t14832Z Brassica rapa HOM05D007179 ORTHO05D009124 7.4e-60 234.2 170 80.0
C07p55870 Brassica napus HOM05D007179 ORTHO05D009124 2.2e-59 232.6 170 79.4
A03p57660 Brassica napus HOM05D007179 ORTHO05D009124 2.8e-59 232.3 170 79.4
Thhalv10026434m.g Eutrema salsugineum HOM05D007179 ORTHO05D009124 1.1e-58 230.3 168 76.8
AT4G28025 Arabidopsis thaliana HOM05D007179 ORTHO05D009124 3.1e-58 228.8 161 80.1
AL7G24590 Arabidopsis lyrata HOM05D007179 ORTHO05D009124 1.0e-56 223.8 160 77.5
Carub.0007s1277 Capsella rubella HOM05D007179 ORTHO05D009124 1.7e-56 223.0 160 78.8
BcaC06g32651 Brassica carinata HOM05D007179 ORTHO05D009124 4.2e-55 218.4 164 76.2
CARHR235720 Cardamine hirsuta HOM05D007179 ORTHO05D009124 2.9e-48 195.7 166 69.9
Aa31LG3G160 Aethionema arabicum HOM05D007179 ORTHO05D009124 1.8e-42 176.4 157 66.9
THA.LOC104817810 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 4.7e-38 161.8 154 63.0
SalBow1G0390 Salvia bowleyana HOM05D007179 ORTHO05D009124 3.5e-33 145.6 142 59.9
CANSAT11G0330 Cannabis sativa HOM05D007179 ORTHO05D009124 7.7e-33 144.4 138 60.1
CiPaw.08G039500 Carya illinoinensis HOM05D007179 ORTHO05D009124 1.1e-31 140.6 142 60.6
CSS0047035 Camellia sinensis var. sinensis HOM05D007179 ORTHO05D009124 1.9e-31 139.8 162 54.9
Rhsim01G0010000 Rhododendron simsii HOM05D007179 ORTHO05D009124 1.9e-31 139.8 156 55.1
Dinv41297 Davidia involucrata HOM05D007179 ORTHO05D009124 1.2e-30 137.1 142 57.0
Oeu058831.1 Olea europaea HOM05D007179 ORTHO05D009124 1.2e-30 137.1 142 54.9
Potri.006G175600 Populus trichocarpa HOM05D007179 ORTHO05D009124 1.6e-30 136.7 136 56.6
Prupe.1G095600 Prunus persica HOM05D007179 ORTHO05D009124 2.7e-30 136.0 146 56.8
THA.LOC104811817 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 2.7e-30 136.0 136 60.3
MD16G1263600 Malus domestica HOM05D007179 ORTHO05D009124 3.6e-30 135.6 121 59.5
Cpa.g.c29666.1 Carica papaya HOM05D007179 ORTHO05D009124 4.7e-30 135.2 114 60.5
Gorai.009G007600 Gossypium raimondii HOM05D007179 ORTHO05D009124 4.7e-30 135.2 154 53.9
CiPaw.07G187200 Carya illinoinensis HOM05D007179 ORTHO05D009124 6.1e-30 134.8 114 64.9
GSVIVG01032307001 Vitis vinifera HOM05D007179 ORTHO05D009124 6.1e-30 134.8 130 58.5
Gohir.D05G007500 Gossypium hirsutum HOM05D007179 ORTHO05D009124 8.0e-30 134.4 154 53.9
Sabra06G0134300 Salix brachista HOM05D007179 ORTHO05D009124 8.0e-30 134.4 136 55.1
arahy.Tifrunner.gnm1.ann1.8TJD28 Arachis hypogaea HOM05D007179 ORTHO05D009124 1.4e-29 133.7 114 62.3
MSTRG.26242 Avicennia marina HOM05D007179 ORTHO05D009124 1.4e-29 133.7 121 60.3
Psat0s236g0160 Pisum sativum HOM05D007179 ORTHO05D009124 1.4e-29 133.7 136 54.4
arahy.Tifrunner.gnm1.ann1.7FN6WP Arachis hypogaea HOM05D007179 ORTHO05D009124 1.8e-29 133.3 114 62.3
Migut.K00269 Erythranthe guttata HOM05D007179 ORTHO05D009124 3.0e-29 132.5 147 54.4
Sed0008122 Sechium edule HOM05D007179 ORTHO05D009124 3.0e-29 132.5 114 64.9
Solyc07g006490.3 Solanum lycopersicum HOM05D007179 ORTHO05D009124 3.0e-29 132.5 110 65.5
RcHm_v2.0_Chr4g0404651 Rosa chinensis HOM05D007179 ORTHO05D009124 4.0e-29 132.1 124 58.1
Medtr4g129320 Medicago truncatula HOM05D007179 ORTHO05D009124 5.2e-29 131.7 137 55.5
Sopen07g002570 Solanum pennellii HOM05D007179 ORTHO05D009124 5.2e-29 131.7 110 66.4
TWI63G0613 Tripterygium wilfordii HOM05D007179 ORTHO05D009124 8.8e-29 131.0 114 61.4
Atru.chr7.533 Acer truncatum HOM05D007179 ORTHO05D009124 1.2e-28 130.6 143 53.8
Cc06_g13840 Coffea canephora HOM05D007179 ORTHO05D009124 1.5e-28 130.2 123 61.8
PGSC0003DMG400027448 Solanum tuberosum HOM05D007179 ORTHO05D009124 2.0e-28 129.8 102 68.6
Gohir.A05G006600 Gossypium hirsutum HOM05D007179 ORTHO05D009124 2.6e-28 129.4 154 51.9
Nn1g04316 Nelumbo nucifera HOM05D007179 ORTHO05D009124 2.6e-28 129.4 114 60.5
PGR102G1777 Punica granatum HOM05D007179 ORTHO05D009124 2.6e-28 129.4 146 57.5
TAR626G0641 Trochodendron aralioides HOM05D007179 ORTHO05D009124 3.4e-28 129.0 154 52.6
FvH4_4g08570 Fragaria vesca HOM05D007179 ORTHO05D009124 5.7e-28 128.3 152 52.6
Lalb_Chr13g0300481 Lupinus albus HOM05D007179 ORTHO05D009124 5.7e-28 128.3 114 62.3
Actinidia24032 Actinidia chinensis HOM05D007179 ORTHO05D009124 1.7e-27 126.7 127 58.3
Thecc.09G162500 Theobroma cacao HOM05D007179 ORTHO05D009124 1.7e-27 126.7 153 52.9
Eucgr.C02437 Eucalyptus grandis HOM05D007179 ORTHO05D009124 3.7e-27 125.6 114 59.6
Nitab4.5_0011540g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 1.4e-26 123.6 97 70.1
Peaxi162Scf00457g00318 Petunia axillaris HOM05D007179 ORTHO05D009124 5.4e-26 121.7 102 65.7
BcaC09g50519 Brassica carinata HOM05D000147 ORTHO05D013131 2.7e-25 119.4 63 95.2
ECA236G0374 Erigeron canadensis HOM05D007179 ORTHO05D009124 5.9e-25 118.2 114 57.9
ClCG11G012230 Citrullus lanatus HOM05D007179 ORTHO05D009124 7.7e-25 117.9 114 58.8
MBI15_g26085_MAGBIO Magnolia biondii HOM05D007179 ORTHO05D009124 7.7e-25 117.9 94 67.0
Hund08993 Selenicereus undatus HOM05D007179 ORTHO05D009124 7.7e-25 117.9 99 63.6
Lj4g0019685 Lotus japonicus HOM05D007179 ORTHO05D009124 1.0e-24 117.5 115 54.8
vmacro13080 Vaccinium macrocarpon HOM05D007179 ORTHO05D009124 1.7e-24 116.7 82 70.7
Glyma.17G067900 Glycine max HOM05D007179 ORTHO05D009124 2.2e-24 116.3 122 54.1
VMungo1215G3157 Vigna mungo HOM05D007179 ORTHO05D009124 2.2e-24 116.3 137 51.8
MELO3C004033.2 Cucumis melo HOM05D007179 ORTHO05D009124 3.8e-24 115.5 155 51.6
CsaV3_2G008330 Cucumis sativus L. HOM05D007179 ORTHO05D009124 3.8e-24 115.5 155 51.0
Lj9A729T43 Lonicera japonica HOM05D007179 ORTHO05D009124 5.0e-24 115.2 136 54.4
CAN.G584.44 Capsicum annuum HOM05D007179 ORTHO05D009124 6.5e-24 114.8 100 65.0
Manes.06G029800 Manihot esculenta HOM05D007179 ORTHO05D009124 6.5e-24 114.8 112 56.2
HanXRQChr05g0136491 Helianthus annuus HOM05D007179 ORTHO05D009124 8.5e-24 114.4 78 74.4
Lsat_1_v5_gn_8_65641 Lactuca sativa HOM05D007179 ORTHO05D009124 8.5e-24 114.4 114 57.0
Ciclev10009752m.g Citrus clementina HOM05D007179 ORTHO05D009124 1.1e-23 114.0 151 48.3
AUR62040282 Chenopodium quinoa HOM05D007179 ORTHO05D009124 3.2e-23 112.5 100 61.0
Sc14g0001110 Simmondsia chinensis HOM05D007179 ORTHO05D009124 7.2e-23 111.3 140 47.1
Aqoxy7G03201 Aquilegia oxysepala HOM05D007179 ORTHO05D009124 9.4e-23 110.9 150 46.0
unitig_37.g12688 Utricularia gibba HOM05D007179 ORTHO05D009124 1.6e-22 110.2 120 55.0
Duzib150G1658 Durio zibethinus HOM05D007179 ORTHO05D009124 6.1e-22 108.2 94 62.8
FAN22G0121 Fragaria x ananassa HOM05D007179 ORTHO05D009124 6.1e-22 108.2 78 71.8
COL.COLO4_16058 Corchorus olitorius HOM05D007179 ORTHO05D009124 1.0e-21 107.5 141 52.5
DCAR_017946 Daucus carota HOM05D007179 ORTHO05D009124 1.4e-21 107.1 126 54.0
EL10Ac8g18859 Beta vulgaris HOM05D007179 ORTHO05D009124 8.8e-21 104.4 81 64.2
AUR62039974 Chenopodium quinoa HOM05D007179 ORTHO05D009124 8.8e-21 104.4 109 56.0
Phvul.003G150500 Phaseolus vulgaris HOM05D007179 ORTHO05D009124 1.2e-20 104.0 158 44.9
PSO782G3484 Papaver somniferum HOM05D007179 ORTHO05D009124 2.0e-20 103.2 143 48.3
ATR0580G253 Amborella trichopoda HOM05D007179 ORTHO05D009124 7.5e-20 101.3 142 47.2
PSO063G6628 Papaver somniferum HOM05D007179 ORTHO05D009124 9.8e-20 100.9 146 46.6
FAN17G2417 Fragaria x ananassa HOM05D007179 ORTHO05D009124 2.8e-19 99.4 71 71.8
Actinidia24777 Actinidia chinensis HOM05D007179 ORTHO05D009124 1.1e-18 97.4 70 70.0
CDE05G2983 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 1.4e-18 97.1 112 50.0
Ca_21187_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009942 2.4e-18 96.3 84 60.7
Hund26395 Selenicereus undatus HOM05D007179 ORTHO05D009124 2.4e-18 96.3 97 57.7
CDE02G2992 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 5.4e-18 95.1 134 45.5
Mapoly0124s0027 Marchantia polymorpha HOM05D007179 ORTHO05D009124 5.4e-18 95.1 109 47.7
HPP92_018535 Vanilla planifolia HOM05D007179 ORTHO05D009124 5.4e-18 95.1 71 63.4
Nitab4.5_0002004g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 1.2e-17 94.0 71 70.4
Pp3c12_25950 Physcomitrium patens HOM05D007179 ORTHO05D009124 3.8e-16 89.0 104 44.2
BcaC09g50518 Brassica carinata HOM05D005733 ORTHO05D007442 6.6e-16 88.2 81 70.4
Zm00001eb246810 Zea mays HOM05D007179 ORTHO05D009124 9.5e-15 84.3 69 62.3
Medtr4g129300 Medicago truncatula HOM05D007179 ORTHO05D009124 2.8e-14 82.8 63 65.1
SMO358G0032 Selaginella moellendorffii HOM05D007179 ORTHO05D009124 1.4e-13 80.5 100 47.0
AagrBONN_evm.TU.Sc2ySwM_362.2423 Anthoceros agrestis HOM05D007179 ORTHO05D009124 5.2e-13 78.6 91 45.1
SGA_v2.0_scaffold325G48698 Striga asiatica HOM05D007179 ORTHO05D009124 1.5e-12 77.0 73 57.5
Haze_22156 Corylus avellana HOM05D007179 ORTHO05D009124 4.9e-11 72.0 95 50.5
Haze_22155 Corylus avellana HOM05D007179 ORTHO05D009124 2.0e-09 66.6 44 68.2
Dinv42771 Davidia involucrata HOM05D007179 ORTHO05D009124 3.6e-06 55.8 70 54.3


User provided reference genes

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