Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p18940 Brassica napus HOM05D004331 ORTHO05D004984 3.1e-53 211.8 102 100.0
BolC1t01820H Brassica oleracea HOM05D004331 ORTHO05D004984 3.1e-53 211.8 102 100.0
BcaC02g12734 Brassica carinata HOM05D004331 ORTHO05D004984 3.6e-49 198.4 102 95.1
A05p01900 Brassica napus HOM05D004331 ORTHO05D004984 3.6e-49 198.4 102 95.1
C04p02240 Brassica napus HOM05D004331 ORTHO05D004984 3.6e-49 198.4 102 95.1
BraA05t19188Z Brassica rapa HOM05D004331 ORTHO05D004984 3.6e-49 198.4 102 95.1
Sp4g23120 Schrenkiella parvula HOM05D004331 ORTHO05D004984 3.6e-49 198.4 102 95.1
BolC4t21871H Brassica oleracea HOM05D004331 ORTHO05D004984 6.1e-49 197.6 102 94.1
BcaC09g50388 Brassica carinata HOM05D004331 ORTHO05D004984 4.0e-48 194.9 102 93.1
BcaC04g21857 Brassica carinata HOM05D004331 ORTHO05D004984 6.8e-48 194.1 102 93.1
BcaC09g50949 Brassica carinata HOM05D004331 ORTHO05D004984 6.8e-48 194.1 102 94.1
BolC1t02551H Brassica oleracea HOM05D004331 ORTHO05D004984 2.0e-47 192.6 102 92.2
Thhalv10016808m.g Eutrema salsugineum HOM05D004331 ORTHO05D004984 2.0e-47 192.6 102 92.2
AT3G56430 Arabidopsis thaliana HOM05D004331 ORTHO05D004984 4.4e-47 191.4 102 91.2
CARHR166560 Cardamine hirsuta HOM05D004331 ORTHO05D004984 4.4e-47 191.4 102 91.2
BcaC02g11378 Brassica carinata HOM05D004331 ORTHO05D004984 7.5e-47 190.7 102 91.2
C04p16400 Brassica napus HOM05D004331 ORTHO05D004984 7.5e-47 190.7 102 91.2
AL4G38690 Arabidopsis lyrata HOM05D004331 ORTHO05D004984 1.3e-46 189.9 102 91.2
CARHR135900 Cardamine hirsuta HOM05D004331 ORTHO05D004984 1.7e-46 189.5 102 90.2
C01p26060 Brassica napus HOM05D004331 ORTHO05D004984 2.2e-46 189.1 102 91.2
C09p26570 Brassica napus HOM05D004331 ORTHO05D004984 2.2e-46 189.1 102 91.2
BolC9t55553H Brassica oleracea HOM05D004331 ORTHO05D004984 2.2e-46 189.1 102 91.2
AL5G37760 Arabidopsis lyrata HOM05D004331 ORTHO05D004984 2.8e-46 188.7 102 90.2
Carub.0005s2321 Capsella rubella HOM05D004331 ORTHO05D004984 2.8e-46 188.7 102 89.2
AT2G40800 Arabidopsis thaliana HOM05D004331 ORTHO05D004984 4.9e-46 188.0 102 89.2
Aa31LG10G11310 Aethionema arabicum HOM05D004331 ORTHO05D004984 8.3e-46 187.2 102 88.2
C08p31740 Brassica napus HOM05D004331 ORTHO05D004984 8.3e-46 187.2 102 89.2
Thhalv10006036m.g Eutrema salsugineum HOM05D004331 ORTHO05D004984 8.3e-46 187.2 102 89.2
MD01G1171000 Malus domestica HOM05D004331 ORTHO05D004984 8.3e-46 187.2 102 88.2
BolC8t50795H Brassica oleracea HOM05D004331 ORTHO05D004984 3.1e-45 185.3 102 88.2
A09p49380 Brassica napus HOM05D004331 ORTHO05D004984 4.1e-45 184.9 102 88.2
BraA09t40391Z Brassica rapa HOM05D004331 ORTHO05D004984 4.1e-45 184.9 102 88.2
THA.LOC104824369 Tarenaya hassleriana HOM05D004331 ORTHO05D004984 5.4e-45 184.5 102 86.3
Sp5g06060 Schrenkiella parvula HOM05D004331 ORTHO05D004984 2.0e-44 182.6 101 88.1
THA.LOC104814366 Tarenaya hassleriana HOM05D004331 ORTHO05D004984 3.5e-44 181.8 102 84.3
arahy.Tifrunner.gnm1.ann1.J1TSCZ Arachis hypogaea HOM05D004331 ORTHO05D004984 7.7e-44 180.6 102 83.3
arahy.Tifrunner.gnm1.ann1.M9I45E Arachis hypogaea HOM05D004331 ORTHO05D004984 7.7e-44 180.6 102 83.3
MD07G1237400 Malus domestica HOM05D004331 ORTHO05D004984 1.7e-43 179.5 101 84.2
QL08p065166 Quercus lobata HOM05D004331 ORTHO05D004984 2.9e-43 178.7 102 82.4
Potri.019G062200 Populus trichocarpa HOM05D004331 ORTHO05D004984 3.8e-43 178.3 101 83.2
TWI73G1241 Tripterygium wilfordii HOM05D004331 ORTHO05D004984 3.8e-43 178.3 102 82.4
Phvul.009G042200 Phaseolus vulgaris HOM05D004331 ORTHO05D004984 5.0e-43 177.9 102 82.4
FvH4_7g26230 Fragaria vesca HOM05D004331 ORTHO05D004984 6.6e-43 177.6 102 83.3
FAN06G3213 Fragaria x ananassa HOM05D004331 ORTHO05D004984 6.6e-43 177.6 102 83.3
FAN10G3590 Fragaria x ananassa HOM05D004331 ORTHO05D004984 6.6e-43 177.6 102 83.3
Gohir.D10G184000 Gossypium hirsutum HOM05D004331 ORTHO05D004984 6.6e-43 177.6 102 84.3
Gorai.011G206200 Gossypium raimondii HOM05D004331 ORTHO05D004984 6.6e-43 177.6 102 84.3
Sed0000286 Sechium edule HOM05D004331 ORTHO05D004984 6.6e-43 177.6 102 83.3
ClCG11G005520 Citrullus lanatus HOM05D004331 ORTHO05D004984 8.6e-43 177.2 102 82.4
Duzib114G0903 Durio zibethinus HOM05D004331 ORTHO05D004984 8.6e-43 177.2 102 82.4
Duzib128G0601 Durio zibethinus HOM05D004331 ORTHO05D004984 8.6e-43 177.2 102 82.4
FAN01G2544 Fragaria x ananassa HOM05D004331 ORTHO05D004984 8.6e-43 177.2 102 83.3
Atru.chr12.214 Acer truncatum HOM05D004331 ORTHO05D004984 1.1e-42 176.8 101 82.2
GSVIVG01032862001 Vitis vinifera HOM05D004331 ORTHO05D004984 1.1e-42 176.8 101 81.2
PGR142G0580 Punica granatum HOM05D004331 ORTHO05D004984 1.5e-42 176.4 101 81.2
RcHm_v2.0_Chr1g0372681 Rosa chinensis HOM05D004331 ORTHO05D004984 1.5e-42 176.4 102 82.4
CiPaw.01G307700 Carya illinoinensis HOM05D004331 ORTHO05D004984 1.9e-42 176.0 102 81.4
Sabra19G0075700 Salix brachista HOM05D004331 ORTHO05D004984 1.9e-42 176.0 102 82.4
Sabra19G0081100 Salix brachista HOM05D004331 ORTHO05D004984 1.9e-42 176.0 102 82.4
Cfa001189 Carpinus fangiana HOM05D004331 ORTHO05D004984 2.5e-42 175.6 101 82.2
Ca_16853_v3 Cicer arietinum L. HOM05D004331 ORTHO05D004984 2.5e-42 175.6 102 79.4
Ca_29501_v3 Cicer arietinum L. HOM05D004331 ORTHO05D004984 2.5e-42 175.6 102 79.4
Glyma.06G141000 Glycine max HOM05D004331 ORTHO05D004984 3.3e-42 175.3 101 79.2
Manes.10G004100 Manihot esculenta HOM05D004331 ORTHO05D004984 3.3e-42 175.3 102 79.4
CANSAT56G0386 Cannabis sativa HOM05D004331 ORTHO05D004984 4.2e-42 174.9 102 82.4
Eucgr.L02349 Eucalyptus grandis HOM05D004331 ORTHO05D004984 4.2e-42 174.9 101 79.2
Lj1g0025811 Lotus japonicus HOM05D004331 ORTHO05D004984 4.2e-42 174.9 102 77.5
Gohir.A10G177400 Gossypium hirsutum HOM05D004331 ORTHO05D004984 7.2e-42 174.1 101 83.2
Haze_17376 Corylus avellana HOM05D004331 ORTHO05D004984 9.5e-42 173.7 101 81.2
TPR.G13966 Trifolium pratense HOM05D004331 ORTHO05D004984 9.5e-42 173.7 102 77.5
Medtr3g093690 Medicago truncatula HOM05D004331 ORTHO05D004984 1.2e-41 173.3 102 79.4
MELO3C022105.2 Cucumis melo HOM05D004331 ORTHO05D004984 1.6e-41 172.9 101 81.2
Lalb_Chr11g0067651 Lupinus albus HOM05D004331 ORTHO05D004984 2.1e-41 172.6 102 79.4
CsaV3_5G039270 Cucumis sativus L. HOM05D004331 ORTHO05D004984 2.8e-41 172.2 102 80.4
Psat5g069640 Pisum sativum HOM05D004331 ORTHO05D004984 2.8e-41 172.2 102 78.4
VMungo1309G0248 Vigna mungo HOM05D004331 ORTHO05D004984 3.6e-41 171.8 102 78.4
CAN.G30.2 Capsicum annuum HOM05D004331 ORTHO05D004984 4.7e-41 171.4 102 79.4
Peaxi162Scf00073g02119 Petunia axillaris HOM05D004331 ORTHO05D004984 4.7e-41 171.4 102 79.4
Thecc.10G186200 Theobroma cacao HOM05D004331 ORTHO05D004984 4.7e-41 171.4 102 81.4
Eucgr.G03152 Eucalyptus grandis HOM05D004331 ORTHO05D004984 6.1e-41 171.0 101 78.2
Glyma.04G223900 Glycine max HOM05D004331 ORTHO05D004984 6.1e-41 171.0 101 77.2
Nitab4.5_0009756g0010 Nicotiana tabacum HOM05D004331 ORTHO05D004984 8.0e-41 170.6 102 77.5
Sopen03g025450 Solanum pennellii HOM05D004331 ORTHO05D004984 8.0e-41 170.6 102 78.4
TAR636G1774 Trochodendron aralioides HOM05D004331 ORTHO05D004984 8.0e-41 170.6 102 77.5
Cpa.g.sc19.35 Carica papaya HOM05D004331 ORTHO05D004984 1.0e-40 170.2 102 79.4
Ciclev10031884m.g Citrus clementina HOM05D004331 ORTHO05D004984 1.8e-40 169.5 102 78.4
Solyc03g095470.3 Solanum lycopersicum HOM05D004331 ORTHO05D004984 1.8e-40 169.5 102 77.5
PGSC0003DMG400005253 Solanum tuberosum HOM05D004331 ORTHO05D004984 1.8e-40 169.5 102 77.5
CSS0028422 Camellia sinensis var. sinensis HOM05D004331 ORTHO05D004984 2.3e-40 169.1 102 77.5
MSTRG.156 Avicennia marina HOM05D004331 ORTHO05D004984 3.0e-40 168.7 102 77.5
Migut.F00564 Erythranthe guttata HOM05D004331 ORTHO05D004984 3.0e-40 168.7 102 77.5
Sc11g0006070 Simmondsia chinensis HOM05D004331 ORTHO05D004984 3.0e-40 168.7 102 73.5
Cc02_g05110 Coffea canephora HOM05D004331 ORTHO05D004984 5.2e-40 167.9 102 77.5
Dinv21866 Davidia involucrata HOM05D004331 ORTHO05D004984 5.2e-40 167.9 102 76.5
Lj1A969T93 Lonicera japonica HOM05D004331 ORTHO05D004984 5.2e-40 167.9 102 76.5
Oeu039397.2 Olea europaea HOM05D004331 ORTHO05D004984 5.2e-40 167.9 102 76.5
COL.COLO4_19485 Corchorus olitorius HOM05D004331 ORTHO05D004984 6.8e-40 167.5 101 80.2
Aqoxy4G03301 Aquilegia oxysepala HOM05D004331 ORTHO05D004984 8.9e-40 167.2 102 75.5
SGA_v2.0_scaffold397G50761 Striga asiatica HOM05D004331 ORTHO05D004984 8.9e-40 167.2 102 76.5
ATR1127G084 Amborella trichopoda HOM05D004331 ORTHO05D004984 1.5e-39 166.4 102 74.5
Nn5g26801 Nelumbo nucifera HOM05D004331 ORTHO05D004984 1.5e-39 166.4 102 75.5
Actinidia01013 Actinidia chinensis HOM05D004331 ORTHO05D004984 2.0e-39 166.0 102 76.5
Dinv34508 Davidia involucrata HOM05D004331 ORTHO05D004984 2.0e-39 166.0 102 75.5
SalBow3G0869 Salvia bowleyana HOM05D004331 ORTHO05D004984 2.0e-39 166.0 102 75.5
vmacro09950 Vaccinium macrocarpon HOM05D004331 ORTHO05D004984 3.4e-39 165.2 102 73.5
AUR62030578 Chenopodium quinoa HOM05D004331 ORTHO05D004984 4.4e-39 164.9 102 74.5
DCAR_020157 Daucus carota HOM05D004331 ORTHO05D004984 5.7e-39 164.5 102 75.5
PSO017G4126 Papaver somniferum HOM05D004331 ORTHO05D004984 5.7e-39 164.5 102 74.5
PSO170G2208 Papaver somniferum HOM05D004331 ORTHO05D004984 5.7e-39 164.5 102 74.5
SEGI_36006 Sequoiadendron giganteum HOM05D004331 ORTHO05D004984 5.7e-39 164.5 100 76.0
Hund13431 Selenicereus undatus HOM05D004331 ORTHO05D004984 7.5e-39 164.1 102 75.5
SGA_v2.0_scaffold60G20876 Striga asiatica HOM05D004331 ORTHO05D004984 7.5e-39 164.1 102 75.5
Actinidia07780 Actinidia chinensis HOM05D004331 ORTHO05D004984 9.8e-39 163.7 97 80.4
AUR62032546 Chenopodium quinoa HOM05D004331 ORTHO05D004984 9.8e-39 163.7 102 73.5
Lalb_Chr08g0239281 Lupinus albus HOM05D004331 ORTHO05D004984 9.8e-39 163.7 102 73.5
HanXRQChr07g0204811 Helianthus annuus HOM05D004331 ORTHO05D004984 1.3e-38 163.3 102 76.5
Os01g0168300 Oryza sativa ssp. japonica HOM05D004331 ORTHO05D004984 1.3e-38 163.3 102 77.5
ECA238G1814 Erigeron canadensis HOM05D004331 ORTHO05D004984 1.7e-38 162.9 102 74.5
EL10Ac2g02684 Beta vulgaris HOM05D004331 ORTHO05D004984 2.2e-38 162.5 102 74.5
Lsat_1_v5_gn_2_127600 Lactuca sativa HOM05D004331 ORTHO05D004984 2.2e-38 162.5 102 74.5
MBI15_g36678_MAGBIO Magnolia biondii HOM05D004331 ORTHO05D004984 2.2e-38 162.5 102 73.5
Rhsim09G0186700 Rhododendron simsii HOM05D004331 ORTHO05D004984 2.9e-38 162.2 102 72.5
Ah.10g029610 Amaranthus hybridus HOM05D000033 ORTHO05D000913 4.9e-38 161.4 102 71.6
Hma1.2p1_0264F.1_g105850 Hydrangea macrophylla HOM05D004331 ORTHO05D004984 6.4e-38 161.0 102 75.5
Zm00001eb336450 Zea mays HOM05D004331 ORTHO05D004984 1.1e-37 160.2 102 75.5
unitig_88.g27825 Utricularia gibba HOM05D004331 ORTHO05D004984 4.1e-37 158.3 102 71.6
HPP92_012570 Vanilla planifolia HOM05D004331 ORTHO05D004984 3.5e-36 155.2 102 73.5
Mapoly0158s0020 Marchantia polymorpha HOM05D004331 ORTHO05D004984 4.3e-34 148.3 102 70.6
BcaC04g23398 Brassica carinata HOM05D004331 ORTHO05D004984 9.5e-34 147.1 102 74.5
AagrBONN_evm.TU.Sc2ySwM_340.90 Anthoceros agrestis HOM05D004331 ORTHO05D004984 1.0e-32 143.7 102 66.7
Pp3c7_18440 Physcomitrium patens HOM05D004331 ORTHO05D004984 3.1e-32 142.1 102 65.7
BcaC01g00580 Brassica carinata HOM05D003032 ORTHO05D003456 1.2e-31 140.2 74 93.2
C03p81590 Brassica napus HOM05D004331 ORTHO05D004984 1.2e-31 140.2 74 93.2
BolC3t20429H Brassica oleracea HOM05D004331 ORTHO05D004984 1.2e-31 140.2 74 93.2
Pp3c1_5190 Physcomitrium patens HOM05D004331 ORTHO05D004984 4.4e-31 138.3 102 63.7
CBR_g29882 Chara braunii HOM05D004331 ORTHO05D004984 7.8e-28 127.5 100 61.0
Actinidia13632 Actinidia chinensis HOM05D004331 ORTHO05D004984 2.3e-27 125.9 82 74.4
SMO361G0183 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 3.9e-27 125.2 106 56.6
SMO199G0115 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 5.0e-27 124.8 107 56.1
BcaC07g39957 Brassica carinata HOM05D004331 ORTHO05D004984 4.7e-25 118.2 102 59.8
BolC9t53789H Brassica oleracea HOM05D004331 ORTHO05D004984 1.9e-21 106.3 55 92.7
Prupe.2G266500 Prunus persica HOM05D004331 ORTHO05D004984 2.4e-21 105.9 76 68.4
Manes.03G048500 Manihot esculenta HOM05D004331 ORTHO05D004984 7.1e-21 104.4 76 67.1
SMO361G0173 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 1.6e-20 103.2 101 48.5
SMO361G0787 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 1.6e-20 103.2 101 48.5
Carub.0004s2310 Capsella rubella HOM05D004331 ORTHO05D004984 2.7e-20 102.4 76 67.1
HPP92_012539 Vanilla planifolia HOM05D004331 ORTHO05D004984 1.0e-19 100.5 104 55.8
MSTRG.8387 Avicennia marina HOM05D004331 ORTHO05D004984 9.5e-18 94.0 76 57.9
SHI31863 Sapria himalayana HOM05D004331 ORTHO05D004984 4.7e-17 91.7 57 71.9
BraA04t18575Z Brassica rapa HOM05D004331 ORTHO05D016805 3.7e-14 82.0 44 90.9
VMungo0540G1227 Vigna mungo HOM05D004331 ORTHO05D004984 6.4e-14 81.3 50 76.0
BolC4t28360H Brassica oleracea HOM05D004331 ORTHO05D004984 1.2e-12 77.0 71 59.2
Nitab4.5_0018056g0010 Nicotiana tabacum HOM05D004331 ORTHO05D004984 4.6e-12 75.1 44 77.3
Aqoxy4G02083 Aquilegia oxysepala HOM05D004331 ORTHO05D004984 7.8e-12 74.3 49 67.3
PRCOL_00001688 Prasinoderma coloniale HOM05D004331 ORTHO05D004984 7.8e-12 74.3 95 42.1
SHI31864 Sapria himalayana HOM05D004331 ORTHO05D004984 6.6e-11 71.2 44 75.0
CiPaw.02G199300 Carya illinoinensis HOM05D004331 ORTHO05D004984 3.3e-10 68.9 40 75.0
Cre05.g232752 Chlamydomonas reinhardtii HOM05D004331 ORTHO05D004984 3.6e-09 65.5 142 29.6


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