Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p02220 Brassica napus HOM05D005933 ORTHO05D007366 4.0e-262 907.5 449 100.0
BolC1t00214H Brassica oleracea HOM05D005933 ORTHO05D007366 7.6e-253 876.7 449 97.1
BraA01t00193Z Brassica rapa HOM05D005933 ORTHO05D007366 3.8e-252 874.4 449 96.7
A01p02040 Brassica napus HOM05D005933 ORTHO05D007366 1.1e-251 872.8 449 96.0
Sp7g34530 Schrenkiella parvula HOM05D005933 ORTHO05D007366 2.4e-230 802.0 463 87.7
Thhalv10025158m.g Eutrema salsugineum HOM05D005933 ORTHO05D007366 1.4e-227 792.7 462 86.1
BcaNung03520 Brassica carinata HOM05D005933 ORTHO05D007366 2.5e-227 792.0 451 87.6
Carub.0007s0431 Capsella rubella HOM05D005933 ORTHO05D007366 9.1e-222 773.5 456 86.0
AL7G15130 Arabidopsis lyrata HOM05D005933 ORTHO05D007366 1.3e-220 769.6 463 84.2
AT4G35910 Arabidopsis thaliana HOM05D005933 ORTHO05D007366 1.1e-219 766.5 461 84.4
CARHR244310 Cardamine hirsuta HOM05D005933 ORTHO05D007366 2.0e-216 755.7 458 83.6
Aa31LG6G13690 Aethionema arabicum HOM05D005933 ORTHO05D007366 4.5e-205 718.0 466 79.0
THA.LOC104811196 Tarenaya hassleriana HOM05D005933 ORTHO05D007366 5.6e-179 631.3 463 70.4
QL07p000522 Quercus lobata HOM05D005933 ORTHO05D007366 4.6e-157 558.5 459 62.3
Sabra06G0036000 Salix brachista HOM05D005933 ORTHO05D007366 3.3e-155 552.4 451 61.6
QL07p000555 Quercus lobata HOM05D005933 ORTHO05D007366 1.6e-154 550.1 462 62.1
Manes.09G022000 Manihot esculenta HOM05D005933 ORTHO05D007366 6.2e-154 548.1 439 61.7
CiPaw.08G166600 Carya illinoinensis HOM05D005933 ORTHO05D007366 8.9e-153 544.3 463 60.0
arahy.Tifrunner.gnm1.ann1.T110QE Arachis hypogaea HOM05D005933 ORTHO05D007366 1.2e-152 543.9 459 59.5
Ciclev10004945m.g Citrus clementina HOM05D005933 ORTHO05D007366 1.5e-152 543.5 458 61.6
arahy.Tifrunner.gnm1.ann1.EHL0AN Arachis hypogaea HOM05D005933 ORTHO05D007366 2.0e-152 543.1 459 59.3
Lj1g0013042 Lotus japonicus HOM05D005933 ORTHO05D007366 3.4e-152 542.3 458 59.8
Potri.006G051300 Populus trichocarpa HOM05D005933 ORTHO05D007366 4.4e-152 542.0 462 60.2
Duzib093G2041 Durio zibethinus HOM05D005933 ORTHO05D007366 5.8e-152 541.6 460 60.2
Phvul.001G132100 Phaseolus vulgaris HOM05D005933 ORTHO05D007366 1.7e-151 540.0 458 59.2
Haze_19854 Corylus avellana HOM05D005933 ORTHO05D007366 4.9e-151 538.5 442 62.4
TWI74G0083 Tripterygium wilfordii HOM05D005933 ORTHO05D007366 2.4e-150 536.2 467 59.1
Lalb_Chr25g0287121 Lupinus albus HOM05D005933 ORTHO05D007366 3.2e-150 535.8 453 59.2
Thecc.05G153300 Theobroma cacao HOM05D005933 ORTHO05D007366 1.6e-149 533.5 467 58.0
Eucgr.A02347 Eucalyptus grandis HOM05D005933 ORTHO05D007366 2.1e-149 533.1 463 59.8
Glyma.03G136900 Glycine max HOM05D005933 ORTHO05D007366 2.7e-149 532.7 458 58.3
RcHm_v2.0_Chr3g0482381 Rosa chinensis HOM05D005933 ORTHO05D007366 2.7e-149 532.7 472 57.4
CANSAT78G0457 Cannabis sativa HOM05D005933 ORTHO05D007366 1.3e-148 530.4 473 59.0
MD12G1074000 Malus domestica HOM05D005933 ORTHO05D007366 3.9e-148 528.9 466 58.4
COL.COLO4_28284 Corchorus olitorius HOM05D005933 ORTHO05D007366 6.6e-148 528.1 456 59.0
Cpa.g.sc92.52 Carica papaya HOM05D005933 ORTHO05D007366 1.5e-147 526.9 446 61.0
PGR004G0721 Punica granatum HOM05D005933 ORTHO05D007366 5.6e-147 525.0 469 59.1
Ca_08457_v3 Cicer arietinum L. HOM05D005933 ORTHO05D007366 2.1e-146 523.1 458 57.0
Gohir.D11G173800 Gossypium hirsutum HOM05D005933 ORTHO05D007366 2.1e-146 523.1 464 57.5
FvH4_6g23820 Fragaria vesca HOM05D005933 ORTHO05D007366 2.8e-146 522.7 458 57.9
Gorai.007G186200 Gossypium raimondii HOM05D005933 ORTHO05D007366 2.8e-146 522.7 464 58.0
Medtr7g091500 Medicago truncatula HOM05D005933 ORTHO05D007366 2.8e-146 522.7 457 57.8
Actinidia39225 Actinidia chinensis HOM05D005933 ORTHO05D007366 6.2e-146 521.5 477 57.0
FAN02G2268 Fragaria x ananassa HOM05D005933 ORTHO05D007366 2.4e-145 519.6 461 57.5
FAN05G5216 Fragaria x ananassa HOM05D005933 ORTHO05D007366 4.0e-145 518.8 461 57.3
Gohir.A11G167500 Gossypium hirsutum HOM05D005933 ORTHO05D007366 5.3e-145 518.5 464 57.1
Hma1.2p1_2002F.1_g310760 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 2.6e-144 516.2 474 56.1
Psat3g072720 Pisum sativum HOM05D005933 ORTHO05D007366 4.2e-142 508.8 433 58.9
Actinidia09329 Actinidia chinensis HOM05D005933 ORTHO05D007366 9.3e-142 507.7 478 56.5
GSVIVG01033275001 Vitis vinifera HOM05D005933 ORTHO05D007366 2.1e-141 506.5 474 56.5
FAN14G1069 Fragaria x ananassa HOM05D005933 ORTHO05D007366 2.7e-141 506.1 449 57.5
HanXRQChr09g0252561 Helianthus annuus HOM05D005933 ORTHO05D007366 2.7e-141 506.1 462 56.9
MELO3C009712.2 Cucumis melo HOM05D005933 ORTHO05D007366 1.1e-139 500.7 470 56.6
ECA236G1702 Erigeron canadensis HOM05D005933 ORTHO05D007366 1.1e-139 500.7 456 56.4
AUR62026040 Chenopodium quinoa HOM05D005933 ORTHO05D007366 4.3e-139 498.8 461 54.4
Solyc10g080110.3 Solanum lycopersicum HOM05D005933 ORTHO05D007366 7.3e-139 498.0 481 53.6
VMungo1383G3081 Vigna mungo HOM05D005933 ORTHO05D007366 1.6e-138 496.9 559 48.1
Sopen10g030730 Solanum pennellii HOM05D005933 ORTHO05D007366 2.1e-138 496.5 481 53.6
Lsat_1_v5_gn_8_81281 Lactuca sativa HOM05D005933 ORTHO05D007366 2.8e-138 496.1 472 55.5
Sed0001053 Sechium edule HOM05D005933 ORTHO05D007366 1.1e-137 494.2 461 56.4
CsaV3_3G039700 Cucumis sativus L. HOM05D005933 ORTHO05D007366 1.4e-137 493.8 469 55.2
PGSC0003DMG400023688 Solanum tuberosum HOM05D005933 ORTHO05D007366 3.1e-137 492.7 484 53.1
Cc06_g17560 Coffea canephora HOM05D005933 ORTHO05D007366 5.3e-137 491.9 498 53.0
Peaxi162Scf00618g00022 Petunia axillaris HOM05D005933 ORTHO05D007366 5.3e-137 491.9 463 54.4
Oeu017944.1 Olea europaea HOM05D005933 ORTHO05D007366 6.9e-137 491.5 462 55.4
EL10Ac3g07091 Beta vulgaris HOM05D005933 ORTHO05D007366 5.8e-136 488.4 468 53.2
Atru.chr1.1098 Acer truncatum HOM05D005933 ORTHO05D007366 1.3e-135 487.3 366 67.5
Lju124A41G42 Lonicera japonica HOM05D005933 ORTHO05D007366 1.3e-135 487.3 434 56.9
vmacro07854 Vaccinium macrocarpon HOM05D005933 ORTHO05D007366 2.9e-135 486.1 508 52.4
Migut.J01758 Erythranthe guttata HOM05D005933 ORTHO05D007366 6.4e-135 485.0 474 54.9
Rhsim03G0021100 Rhododendron simsii HOM05D005933 ORTHO05D007366 6.4e-135 485.0 454 55.5
Rhsim03G0022400 Rhododendron simsii HOM05D005933 ORTHO05D007366 6.4e-135 485.0 459 56.4
CSS0022562 Camellia sinensis var. sinensis HOM05D005933 ORTHO05D007366 1.4e-134 483.8 472 53.4
Hund05286 Selenicereus undatus HOM05D005933 ORTHO05D007366 1.4e-134 483.8 432 56.7
TPR.G854 Trifolium pratense HOM05D005933 ORTHO05D007366 3.2e-134 482.6 397 59.9
DCAR_009061 Daucus carota HOM05D005933 ORTHO05D007366 2.1e-133 479.9 479 53.4
MSTRG.19860 Avicennia marina HOM05D005933 ORTHO05D007366 3.5e-133 479.2 481 54.7
Nitab4.5_0008648g0010 Nicotiana tabacum HOM05D005933 ORTHO05D007366 7.4e-131 471.5 502 51.2
ClCG10G016640 Citrullus lanatus HOM05D005933 ORTHO05D007366 2.8e-130 469.5 518 50.6
Nitab4.5_0009442g0020 Nicotiana tabacum HOM05D005933 ORTHO05D007366 2.4e-129 466.5 468 53.2
BcaNung04276 Brassica carinata HOM05D005933 ORTHO05D007366 1.5e-128 463.8 439 61.7
SalBow6G0452 Salvia bowleyana HOM05D005933 ORTHO05D007366 3.4e-128 462.6 447 54.8
Dinv39604 Davidia involucrata HOM05D005933 ORTHO05D007366 1.3e-127 460.7 389 60.4
Ah.13g075070 Amaranthus hybridus HOM05D005933 ORTHO05D007366 4.9e-127 458.8 438 52.5
AUR62024451 Chenopodium quinoa HOM05D005933 ORTHO05D007366 4.6e-125 452.2 496 48.8
SGA_v2.0_scaffold69G23116 Striga asiatica HOM05D005933 ORTHO05D007366 8.7e-124 448.0 478 50.8
PSO782G3339 Papaver somniferum HOM05D005933 ORTHO05D007366 1.9e-123 446.8 471 51.4
Aqoxy5G03564 Aquilegia oxysepala HOM05D005933 ORTHO05D007366 8.2e-122 441.4 473 50.3
Peaxi162Scf00354g00225 Petunia axillaris HOM05D005933 ORTHO05D007366 1.2e-120 437.6 433 52.0
CAN.G128.8 Capsicum annuum HOM05D005933 ORTHO05D007366 2.1e-117 426.8 381 57.0
Cfa008569 Carpinus fangiana HOM05D005933 ORTHO05D007366 9.7e-115 417.9 327 64.2
Hma1.2p1_2002F.1_g310770 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 2.1e-109 400.2 363 57.0
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 8.8e-108 394.8 429 52.0
MBI16_g31719_MAGBIO Magnolia biondii HOM05D005933 ORTHO05D007366 2.2e-106 390.2 445 49.2
ATR0686G233 Amborella trichopoda HOM05D005933 ORTHO05D007366 3.4e-104 382.9 466 45.7
Prupe.7G060900 Prunus persica HOM05D005933 ORTHO05D007366 3.4e-104 382.9 321 59.8
Os12g0588900 Oryza sativa ssp. japonica HOM05D005933 ORTHO05D007366 8.2e-98 361.7 401 47.9
Oeu008914.1 Olea europaea HOM05D005933 ORTHO05D007366 8.5e-95 351.7 353 53.3
Oeu008916.1 Olea europaea HOM05D005933 ORTHO05D007366 8.5e-95 351.7 353 53.3
SEGI_18184 Sequoiadendron giganteum HOM05D005933 ORTHO05D007366 1.0e-92 344.7 474 40.5
SHI32975 Sapria himalayana HOM05D005933 ORTHO05D000023 2.2e-90 337.0 338 51.5
Sc13g0001740 Simmondsia chinensis HOM05D005933 ORTHO05D007366 8.2e-90 335.1 290 58.3
CDE09G0169 Ceratophyllum demersum HOM05D005933 ORTHO05D007366 4.1e-89 332.8 258 64.0
Zm00001eb135000 Zea mays HOM05D005933 ORTHO05D007366 9.1e-89 331.6 462 42.2
HPP92_017763 Vanilla planifolia HOM05D005933 ORTHO05D007366 6.5e-79 298.9 349 45.0
BcaNung03522 Brassica carinata HOM05D005933 ORTHO05D007366 2.5e-78 297.0 142 100.0
Glyma.19G139200 Glycine max HOM05D005933 ORTHO05D007366 2.0e-72 277.3 223 61.0
Mapoly0165s0023 Marchantia polymorpha HOM05D005933 ORTHO05D007366 3.5e-72 276.6 496 34.9
TAR633G2718 Trochodendron aralioides HOM05D005933 ORTHO05D007366 1.3e-71 274.6 219 60.3
C07p62070 Brassica napus HOM05D005933 ORTHO05D007366 2.8e-66 256.9 160 85.6
BolC7t46624H Brassica oleracea HOM05D005933 ORTHO05D007366 2.8e-66 256.9 160 85.6
AagrBONN_evm.TU.Sc2ySwM_117.299 Anthoceros agrestis HOM05D005933 ORTHO05D007366 1.4e-65 254.6 453 38.0
SMO145G0218 Selaginella moellendorffii HOM05D005933 ORTHO05D007366 5.0e-63 246.1 350 41.7
Pp3c14_19420 Physcomitrium patens HOM05D005933 ORTHO05D007366 1.9e-54 217.6 293 40.6
CDE02G1215 Ceratophyllum demersum HOM05D002948 ORTHO05D003577 6.2e-53 212.6 181 61.3
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 1.1e-49 201.8 378 36.2
Rhsim03G0020400 Rhododendron simsii HOM05D005933 ORTHO05D007366 2.1e-48 197.6 223 48.0
Cfa017749 Carpinus fangiana HOM05D005933 ORTHO05D007366 1.4e-44 184.9 223 48.0
Atru.chr1.1100 Acer truncatum HOM05D005933 ORTHO05D007366 1.1e-41 175.3 165 54.5
CBR_g982 Chara braunii HOM05D005933 ORTHO05D007366 6.6e-39 166.0 447 29.8
Cc06_g12380 Coffea canephora HOM05D005933 ORTHO05D007366 1.2e-37 161.8 172 51.7
Sc13g0001730 Simmondsia chinensis HOM05D005933 ORTHO05D007366 3.6e-37 160.2 155 55.5
MD12G1074100 Malus domestica HOM05D005933 ORTHO05D007366 2.4e-33 147.5 157 47.1
TAR633G2604 Trochodendron aralioides HOM05D005933 ORTHO05D007366 2.8e-29 134.0 112 61.6
Cre01.g043500 Chlamydomonas reinhardtii HOM05D005933 ORTHO05D007366 2.9e-26 124.0 491 26.9
TAR636G2120 Trochodendron aralioides HOM05D005933 ORTHO05D007366 2.5e-22 110.9 116 51.7
SHI32976 Sapria himalayana HOM05D000105 ORTHO05D000023 2.1e-16 91.3 106 50.0
Dinv12483 Davidia involucrata HOM05D005933 ORTHO05D007366 7.4e-14 82.8 109 44.0
Rhsim03G0022600 Rhododendron simsii HOM05D005933 ORTHO05D007366 6.9e-12 76.3 52 71.2
Rhsim03G0024000 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.2e-11 75.5 52 71.2
Nn8g40508 Nelumbo nucifera HOM05D005933 ORTHO05D007366 2.6e-11 74.3 67 56.7
Nn8g40507 Nelumbo nucifera HOM05D005933 ORTHO05D007366 3.8e-10 70.5 91 44.0


User provided reference genes

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