Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC9t56783H Brassica oleracea HOM05D004976 ORTHO05D004851 1.6e-48 195.7 91 100.0
C05p41910 Brassica napus HOM05D004976 ORTHO05D004851 2.5e-30 135.2 70 87.1
AT2G33160 Arabidopsis thaliana HOM05D000037 ORTHO05D000150 7.6e-27 123.6 90 55.6
BolC9t55739H Brassica oleracea HOM05D004976 ORTHO05D004851 5.5e-25 117.5 83 56.6
AT1G27870 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 7.1e-25 117.1 91 51.6
BolC1t02896H Brassica oleracea HOM05D004976 ORTHO05D004851 2.1e-24 115.5 91 54.9
BraA07t29876Z Brassica rapa HOM05D004976 ORTHO05D004851 3.5e-24 114.8 85 56.5
BraA02t07436Z Brassica rapa HOM05D004976 ORTHO05D004851 6.0e-24 114.0 85 60.0
BolC2t08499H Brassica oleracea HOM05D004976 ORTHO05D004851 2.3e-23 112.1 87 50.6
BolC5t29232H Brassica oleracea HOM05D004976 ORTHO05D004851 3.0e-23 111.7 84 58.3
BraA09t38437Z Brassica rapa HOM05D004976 ORTHO05D004851 8.7e-23 110.2 85 52.9
AT3G25270 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 1.5e-22 109.4 88 51.1
BraA01t02778Z Brassica rapa HOM05D004976 ORTHO05D004851 3.3e-22 108.2 90 53.3
C05p50100 Brassica napus HOM05D004976 ORTHO05D004851 4.3e-22 107.8 90 53.3
Thhalv10019506m.g Eutrema salsugineum HOM05D004976 ORTHO05D004851 7.4e-22 107.1 82 51.2
AT1G47497 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 1.3e-21 106.3 85 57.6
AT2G04420 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 1.3e-21 106.3 88 48.9
BraA07t27820Z Brassica rapa HOM05D000207 ORTHO05D001673 1.3e-21 106.3 84 52.4
BolC8t48401H Brassica oleracea HOM05D004976 ORTHO05D004851 1.6e-21 105.9 90 52.2
AL3G23800 Arabidopsis lyrata HOM05D004976 ORTHO05D004851 2.2e-21 105.5 85 55.3
AT2G46460 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 2.2e-21 105.5 85 55.3
BolC8t51211H Brassica oleracea HOM05D004976 ORTHO05D004851 4.8e-21 104.4 84 52.4
BolC5t31734H Brassica oleracea HOM05D004976 ORTHO05D004851 8.2e-21 103.6 85 51.8
BraA09t38717Z Brassica rapa HOM05D004976 ORTHO05D004851 8.2e-21 103.6 83 51.8
BolC6t38560H Brassica oleracea HOM05D004976 ORTHO05D004851 1.8e-20 102.4 85 51.8
AT1G04625 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 5.3e-20 100.9 83 51.8
BraA03t14020Z Brassica rapa HOM05D004976 ORTHO05D004851 9.0e-20 100.1 85 56.5
BolC7t41689H Brassica oleracea HOM05D004976 ORTHO05D004851 1.2e-19 99.8 80 53.8
C05p45240 Brassica napus HOM05D004976 ORTHO05D004851 4.5e-19 97.8 83 50.6
C08p26150 Brassica napus HOM05D004976 ORTHO05D004851 4.5e-19 97.8 91 47.3
CARHR043800 Cardamine hirsuta HOM05D004976 ORTHO05D004851 5.9e-19 97.4 88 46.6
AL8G15920 Arabidopsis lyrata HOM05D004976 ORTHO05D004851 2.9e-18 95.1 78 55.1
Sp5g16840 Schrenkiella parvula HOM05D004976 ORTHO05D004851 2.9e-18 95.1 84 47.6
BraA09t39138Z Brassica rapa HOM05D004976 ORTHO05D004851 1.1e-17 93.2 87 44.8
Sp7g06900 Schrenkiella parvula HOM05D004976 ORTHO05D004851 1.4e-17 92.8 89 44.9
BraA06t23723Z Brassica rapa HOM05D004976 ORTHO05D004851 9.3e-17 90.1 90 41.1
Sp1g19240 Schrenkiella parvula HOM05D004976 ORTHO05D004851 1.8e-15 85.9 80 46.2
CARHR123710 Cardamine hirsuta HOM05D004976 ORTHO05D004851 5.1e-15 84.3 83 44.6
Carub.0004s1022 Capsella rubella HOM05D004976 ORTHO05D004851 1.1e-14 83.2 78 46.2
A10p08070 Brassica napus HOM05D004976 ORTHO05D004851 4.3e-14 81.3 84 41.7
A09p37980 Brassica napus HOM05D004976 ORTHO05D004851 7.4e-14 80.5 83 42.2
Thhalv10022287m.g Eutrema salsugineum HOM05D004976 ORTHO05D004851 9.7e-14 80.1 64 51.6
A02p28410 Brassica napus HOM05D004976 ORTHO05D004851 8.2e-13 77.0 90 37.8
BraA08t35107Z Brassica rapa HOM05D004976 ORTHO05D004851 8.2e-13 77.0 61 52.5
BolC7t43279H Brassica oleracea HOM05D004976 ORTHO05D004851 1.2e-11 73.2 67 46.3
AT1G77815 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 2.0e-11 72.4 46 52.2
C02p26690 Brassica napus HOM05D004976 ORTHO05D004851 3.4e-11 71.6 72 41.7
BolC2t11077H Brassica oleracea HOM05D004976 ORTHO05D004851 3.4e-11 71.6 89 39.3
BolC9t59872H Brassica oleracea HOM05D001406 ORTHO05D002467 5.9e-11 70.9 85 35.3
BraA05t22279Z Brassica rapa HOM05D004976 ORTHO05D004851 7.7e-11 70.5 89 40.4
C09p05940 Brassica napus HOM05D004976 ORTHO05D004851 1.0e-10 70.1 81 40.7
BolC9t53519H Brassica oleracea HOM05D004976 ORTHO05D004851 1.0e-10 70.1 81 40.7
Sp4g00970 Schrenkiella parvula HOM05D004976 ORTHO05D004851 1.0e-10 70.1 80 38.8
BolC2t07249H Brassica oleracea HOM05D004976 ORTHO05D004851 1.7e-10 69.3 46 60.9
Sp6g11330 Schrenkiella parvula HOM05D004976 ORTHO05D004851 2.2e-10 68.9 75 41.3
BolC3t21482H Brassica oleracea HOM05D004976 ORTHO05D004851 3.8e-10 68.2 89 36.0
BraA09t36601Z Brassica rapa HOM05D004976 ORTHO05D004851 6.5e-10 67.4 47 57.4
C02p49980 Brassica napus HOM05D004976 ORTHO05D004851 8.5e-10 67.0 89 34.8
AL1G41300 Arabidopsis lyrata HOM05D004976 ORTHO05D004851 4.2e-09 64.7 86 33.7
BraA01t00584Z Brassica rapa HOM05D004976 ORTHO05D004851 5.5e-09 64.3 74 36.5
Thhalv10002256m.g Eutrema salsugineum HOM05D004976 ORTHO05D004851 1.2e-08 63.2 83 31.3
AT1G27220 Arabidopsis thaliana HOM05D000629 ORTHO05D000576 1.6e-08 62.8 57 47.4
CARHR183650 Cardamine hirsuta HOM05D004976 ORTHO05D004851 7.9e-08 60.5 44 50.0
BcaB08g35528 Brassica carinata HOM05D004976 ORTHO05D004851 1.4e-07 59.7 79 32.9
Thhalv10003059m.g Eutrema salsugineum HOM05D004976 ORTHO05D004851 2.3e-07 58.9 83 36.1
BolC5t32365H Brassica oleracea HOM05D004976 ORTHO05D004851 3.9e-07 58.2 63 36.5
Thhalv10003001m.g Eutrema salsugineum HOM05D004976 ORTHO05D004851 3.9e-07 58.2 52 46.2
Thhalv10027203m.g Eutrema salsugineum HOM05D004976 ORTHO05D004851 3.9e-07 58.2 47 42.6
AT3G09510 Arabidopsis thaliana HOM05D000003 ORTHO05D000004 5.1e-07 57.8 81 29.6
CARHR146840 Cardamine hirsuta HOM05D004976 ORTHO05D004851 5.1e-07 57.8 77 29.9
Thhalv10009902m.g Eutrema salsugineum HOM05D004976 ORTHO05D004851 5.1e-07 57.8 61 44.3
BcaC06g30787 Brassica carinata HOM05D000003 ORTHO05D000004 8.8e-07 57.0 80 30.0
Sp6g05670 Schrenkiella parvula HOM05D004976 ORTHO05D004851 1.1e-06 56.6 83 34.9
AT2G13980 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 1.5e-06 56.2 85 28.2
Sp7g13260 Schrenkiella parvula HOM05D000051 ORTHO05D000015 1.5e-06 56.2 43 53.5
BcaB02g10660 Brassica carinata HOM05D000003 ORTHO05D000004 2.6e-06 55.5 80 36.2
A06p33810 Brassica napus HOM05D004976 ORTHO05D004851 2.6e-06 55.5 81 30.9
CARHR057000 Cardamine hirsuta HOM05D004976 ORTHO05D004851 2.6e-06 55.5 80 30.0
AT3G32130 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 4.4e-06 54.7 48 50.0
AT5G44470 Arabidopsis thaliana HOM05D004976 ORTHO05D004851 5.7e-06 54.3 73 37.0
Thhalv10015769m.g Eutrema salsugineum HOM05D004976 ORTHO05D004851 7.4e-06 53.9 84 28.6
BcaB01g04079 Brassica carinata HOM05D004976 ORTHO05D004851 9.7e-06 53.5 52 44.2
BcaC05g28671 Brassica carinata HOM05D000003 ORTHO05D004851 9.7e-06 53.5 81 30.9
Sp7g07570 Schrenkiella parvula HOM05D004976 ORTHO05D004851 9.7e-06 53.5 57 43.9


User provided reference genes

Program Settings