Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BolC8t51007H Brassica oleracea HOM05D002482 ORTHO05D002594 8.6e-48 193.4 100 100.0
A04p02840 Brassica napus HOM05D002482 ORTHO05D002594 3.1e-21 105.1 82 75.6
BraA04t16008Z Brassica rapa HOM05D002482 ORTHO05D002594 3.1e-21 105.1 82 75.6
BraA07t30027Z Brassica rapa HOM05D002482 ORTHO05D002594 6.9e-21 104.0 92 68.5
BcaC07g40164 Brassica carinata HOM05D002482 ORTHO05D002594 9.9e-20 100.1 91 68.1
BcaC08g44879 Brassica carinata HOM05D002482 ORTHO05D002594 9.9e-20 100.1 92 64.1
BolC6t37649H Brassica oleracea HOM05D002482 ORTHO05D002594 9.9e-20 100.1 92 64.1
BcaB02g07565 Brassica carinata HOM05D002482 ORTHO05D002594 1.3e-19 99.8 93 66.7
BcaB02g08288 Brassica carinata HOM05D002482 ORTHO05D002594 1.3e-19 99.8 82 72.0
BcaC02g09972 Brassica carinata HOM05D002482 ORTHO05D002594 1.4e-18 96.3 82 73.2
C04p34440 Brassica napus HOM05D002482 ORTHO05D002594 1.4e-18 96.3 82 73.2
BolC4t25007H Brassica oleracea HOM05D002482 ORTHO05D002594 1.4e-18 96.3 82 73.2
A07p23740 Brassica napus HOM05D002482 ORTHO05D002594 3.5e-17 91.7 93 63.4
C06p24970 Brassica napus HOM05D002482 ORTHO05D002594 1.3e-16 89.7 74 67.6
Sp5g04790 Schrenkiella parvula HOM05D002482 ORTHO05D002594 1.8e-16 89.4 95 62.1
AL5G39580 Arabidopsis lyrata HOM05D002482 ORTHO05D002594 3.4e-12 75.1 99 54.5
THA.LOC104802478 Tarenaya hassleriana HOM05D002482 ORTHO05D002594 3.4e-12 75.1 98 52.0
Thhalv10006306m.g Eutrema salsugineum HOM05D002482 ORTHO05D002594 4.5e-12 74.7 96 54.2
CARHR168230 Cardamine hirsuta HOM05D002482 ORTHO05D002594 3.5e-09 65.1 48 77.1
Carub.0005s2477 Capsella rubella HOM05D002482 ORTHO05D002594 6.0e-09 64.3 48 77.1
THA.LOC104824468 Tarenaya hassleriana HOM05D002482 ORTHO05D002594 1.3e-08 63.2 104 47.1
AT3G57930 Arabidopsis thaliana HOM05D002482 ORTHO05D002594 2.3e-08 62.4 98 49.0
Aa31LG10G12640 Aethionema arabicum HOM05D002482 ORTHO05D002594 5.1e-08 61.2 40 77.5
QL07p023255 Quercus lobata HOM05D002482 ORTHO05D002594 5.1e-08 61.2 92 46.7
Cfa016904 Carpinus fangiana HOM05D002482 ORTHO05D002594 6.7e-08 60.8 90 48.9
AT2G42190 Arabidopsis thaliana HOM05D002482 ORTHO05D002594 1.5e-07 59.7 77 54.5
Carub.0004s2453 Capsella rubella HOM05D002482 ORTHO05D002594 1.9e-07 59.3 45 73.3
Haze_19967 Corylus avellana HOM05D002482 ORTHO05D002594 1.9e-07 59.3 90 47.8
Dinv14279 Davidia involucrata HOM05D002482 ORTHO05D002594 1.9e-07 59.3 90 51.1
Actinidia09385 Actinidia chinensis HOM05D002482 ORTHO05D002594 2.5e-07 58.9 83 49.4
CARHR137230 Cardamine hirsuta HOM05D002482 ORTHO05D002594 2.5e-07 58.9 40 80.0
Duzib170G0550 Durio zibethinus HOM05D002482 ORTHO05D002594 2.5e-07 58.9 98 48.0
MD11G1024200 Malus domestica HOM05D002482 ORTHO05D002594 2.5e-07 58.9 97 49.5
Actinidia20306 Actinidia chinensis HOM05D002482 ORTHO05D002594 3.3e-07 58.5 88 46.6
BcaB06g29227 Brassica carinata HOM05D002482 ORTHO05D002594 4.3e-07 58.2 43 74.4
C04p69550 Brassica napus HOM05D002482 ORTHO05D002594 4.3e-07 58.2 43 74.4
BolC4t28453H Brassica oleracea HOM05D002482 ORTHO05D002594 4.3e-07 58.2 43 74.4
BcaC02g07259 Brassica carinata HOM05D002482 ORTHO05D002594 9.6e-07 57.0 43 72.1
Ciclev10017123m.g Citrus clementina HOM05D002482 ORTHO05D002594 9.6e-07 57.0 104 48.1
AL4G40550 Arabidopsis lyrata HOM05D002482 ORTHO05D002594 1.3e-06 56.6 43 72.1
BcaC02g12467 Brassica carinata HOM05D002482 ORTHO05D002594 1.3e-06 56.6 44 72.7
CSS0050309 Camellia sinensis var. sinensis HOM05D002482 ORTHO05D002594 1.3e-06 56.6 86 48.8
Duzib150G0288 Durio zibethinus HOM05D002482 ORTHO05D002594 1.6e-06 56.2 96 47.9
Gohir.D01G177900 Gossypium hirsutum HOM05D002482 ORTHO05D002594 1.6e-06 56.2 88 47.7
Gorai.002G225200 Gossypium raimondii HOM05D002482 ORTHO05D002594 1.6e-06 56.2 88 47.7
Prupe.6G020200 Prunus persica HOM05D002482 ORTHO05D002594 1.6e-06 56.2 97 48.5
TWI74G0336 Tripterygium wilfordii HOM05D002482 ORTHO05D002594 1.6e-06 56.2 87 46.0
Gohir.A01G192100 Gossypium hirsutum HOM05D002482 ORTHO05D002594 2.1e-06 55.8 88 47.7
A05p02760 Brassica napus HOM05D002482 ORTHO05D002594 2.8e-06 55.5 44 70.5
C04p03350 Brassica napus HOM05D002482 ORTHO05D002594 2.8e-06 55.5 44 70.5
BolC4t21972H Brassica oleracea HOM05D002482 ORTHO05D002594 2.8e-06 55.5 44 70.5
BraA05t19268Z Brassica rapa HOM05D002482 ORTHO05D002594 2.8e-06 55.5 44 70.5
BraA04t18660Z Brassica rapa HOM05D002482 ORTHO05D002594 3.7e-06 55.1 43 69.8
Duzib106G0603 Durio zibethinus HOM05D002482 ORTHO05D002594 4.8e-06 54.7 97 43.3
Thecc.05G169000 Theobroma cacao HOM05D002482 ORTHO05D002594 4.8e-06 54.7 86 50.0
Glyma.19G146200 Glycine max HOM05D002482 ORTHO05D002594 6.2e-06 54.3 89 46.1
Eucgr.B03652 Eucalyptus grandis HOM05D002482 ORTHO05D002594 8.2e-06 53.9 88 47.7
Glyma.03G143200 Glycine max HOM05D002482 ORTHO05D002594 8.2e-06 53.9 89 46.1


User provided reference genes

Program Settings