Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g11018 Brassica carinata HOM05D010012 ORTHO05D012171 4.0e-69 264.6 131 100.0
C04p22150 Brassica napus HOM05D010012 ORTHO05D012171 4.0e-69 264.6 131 100.0
BolC4t23735H Brassica oleracea HOM05D010012 ORTHO05D012171 4.0e-69 264.6 131 100.0
A07p19320 Brassica napus HOM05D010012 ORTHO05D012171 3.4e-60 235.0 139 89.2
BraA07t29637Z Brassica rapa HOM05D010012 ORTHO05D012171 3.4e-60 235.0 139 89.2
BcaB02g10207 Brassica carinata HOM05D010012 ORTHO05D012171 1.2e-44 183.3 133 75.2
Thhalv10017378m.g Eutrema salsugineum HOM05D010012 ORTHO05D012171 4.2e-42 174.9 149 68.5
BcaC01g04994 Brassica carinata HOM05D010012 ORTHO05D012171 6.0e-41 171.0 144 67.4
C03p31310 Brassica napus HOM05D010012 ORTHO05D012171 6.0e-41 171.0 144 67.4
BolC3t15480H Brassica oleracea HOM05D010012 ORTHO05D012171 6.0e-41 171.0 144 67.4
BraA03t11837Z Brassica rapa HOM05D010012 ORTHO05D012171 7.8e-41 170.6 144 67.4
A03p26230 Brassica napus HOM05D010012 ORTHO05D012171 1.0e-40 170.2 144 67.4
A04p21920 Brassica napus HOM05D010012 ORTHO05D012171 1.3e-40 169.9 136 68.4
BcaB01g03127 Brassica carinata HOM05D010012 ORTHO05D012171 5.1e-40 167.9 144 66.0
Sp4g11680 Schrenkiella parvula HOM05D010012 ORTHO05D012171 7.3e-39 164.1 138 68.1
BcaC02g08129 Brassica carinata HOM05D010012 ORTHO05D012171 9.6e-39 163.7 136 66.9
C04p58060 Brassica napus HOM05D010012 ORTHO05D012171 9.6e-39 163.7 136 66.9
BolC4t27332H Brassica oleracea HOM05D010012 ORTHO05D012171 9.6e-39 163.7 136 66.9
CARHR122020 Cardamine hirsuta HOM05D010012 ORTHO05D012171 1.6e-38 162.9 159 61.6
BcaB06g28260 Brassica carinata HOM05D010012 ORTHO05D012171 3.6e-38 161.8 144 64.6
AL4G23400 Arabidopsis lyrata HOM05D010012 ORTHO05D012171 4.9e-35 151.4 161 58.4
Carub.0004s0986 Capsella rubella HOM05D010012 ORTHO05D012171 1.4e-34 149.8 158 58.2
AT2G28870 Arabidopsis thaliana HOM05D010012 ORTHO05D012171 1.5e-31 139.8 157 56.1
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 3.9e-08 62.0 80 50.0
Dinv16991 Davidia involucrata HOM05D005967 ORTHO05D005174 5.1e-08 61.6 145 32.4
Dinv42940 Davidia involucrata HOM05D005967 ORTHO05D005174 5.1e-08 61.6 145 32.4
Dinv43160 Davidia involucrata HOM05D005967 ORTHO05D005174 5.1e-08 61.6 145 32.4
DCAR_005325 Daucus carota HOM05D005967 ORTHO05D005174 1.5e-07 60.1 89 44.9
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 7.4e-07 57.8 110 39.1
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 9.7e-07 57.4 161 31.7
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 3.7e-06 55.5 84 40.5
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 6.3e-06 54.7 73 45.2
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 8.2e-06 54.3 87 41.4
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 8.2e-06 54.3 76 38.2


User provided reference genes

Program Settings