Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung06687 Brassica carinata HOM05D005295 ORTHO05D005962 3.3e-43 177.9 89 100.0
BcaNung07036 Brassica carinata HOM05D005295 ORTHO05D005962 3.3e-43 177.9 89 100.0
A01p18770 Brassica napus HOM05D005295 ORTHO05D005962 2.8e-42 174.9 89 98.9
C01p23710 Brassica napus HOM05D005295 ORTHO05D005962 2.8e-42 174.9 89 98.9
BraA01t01821Z Brassica rapa HOM05D005295 ORTHO05D005962 2.8e-42 174.9 89 98.9
BcaNung06688 Brassica carinata HOM05D005295 ORTHO05D005962 8.2e-42 173.3 89 97.8
BolC1t02323H Brassica oleracea HOM05D005295 ORTHO05D005962 8.2e-42 173.3 89 97.8
Thhalv10026112m.g Eutrema salsugineum HOM05D005295 ORTHO05D005962 5.3e-41 170.6 89 95.5
Sp7g25480 Schrenkiella parvula HOM05D005295 ORTHO05D005962 7.0e-41 170.2 89 95.5
Carub.0007s1331 Capsella rubella HOM05D005295 ORTHO05D005962 2.9e-39 164.9 89 91.0
Aa31LG5G9970 Aethionema arabicum HOM05D005295 ORTHO05D005962 5.0e-39 164.1 89 92.1
AT4G27540 Arabidopsis thaliana HOM05D005295 ORTHO05D005962 5.0e-39 164.1 89 89.9
AL7G25230 Arabidopsis lyrata HOM05D005295 ORTHO05D005962 3.2e-38 161.4 89 88.8
CARHR235220 Cardamine hirsuta HOM05D005295 ORTHO05D005962 5.5e-38 160.6 89 91.0
THA.LOC104811877 Tarenaya hassleriana HOM05D005295 ORTHO05D005962 8.0e-29 130.2 89 69.7
Hma1.2p1_0387F.1_g141920 Hydrangea macrophylla HOM05D005295 ORTHO05D005962 1.0e-28 129.8 89 69.7
Ciclev10009383m.g Citrus clementina HOM05D005295 ORTHO05D005962 2.6e-27 125.2 89 66.3
Manes.03G106500 Manihot esculenta HOM05D005295 ORTHO05D005962 5.7e-27 124.0 89 65.2
QL08p022700 Quercus lobata HOM05D005295 ORTHO05D005962 9.7e-27 123.2 88 61.4
Sabra11G0101800 Salix brachista HOM05D005295 ORTHO05D005962 1.7e-26 122.5 89 61.8
Thecc.07G095500 Theobroma cacao HOM05D005295 ORTHO05D005962 2.8e-26 121.7 88 65.9
TWI39G0015 Tripterygium wilfordii HOM05D005295 ORTHO05D005962 2.8e-26 121.7 88 62.5
Ciclev10009380m.g Citrus clementina HOM05D005295 ORTHO05D005962 6.3e-26 120.6 89 64.0
Potri.011G116200 Populus trichocarpa HOM05D005295 ORTHO05D005962 8.3e-26 120.2 89 59.6
TWI38G0013 Tripterygium wilfordii HOM05D005295 ORTHO05D005962 1.1e-25 119.8 88 62.5
Hund22882 Selenicereus undatus HOM05D005295 ORTHO05D005962 1.4e-25 119.4 88 61.4
Haze_09452 Corylus avellana HOM05D005295 ORTHO05D005962 4.1e-25 117.9 88 60.2
Lj3g0021836 Lotus japonicus HOM05D005295 ORTHO05D005962 4.1e-25 117.9 88 63.6
Potri.001G396900 Populus trichocarpa HOM05D005295 ORTHO05D005962 5.3e-25 117.5 89 59.6
Thhalv10015755m.g Eutrema salsugineum HOM05D005295 ORTHO05D005962 7.0e-25 117.1 85 60.0
Actinidia12794 Actinidia chinensis HOM05D005295 ORTHO05D005962 1.2e-24 116.3 88 63.6
Oeu019302.2 Olea europaea HOM05D005295 ORTHO05D005962 1.2e-24 116.3 86 58.1
VMungo1080G0752 Vigna mungo HOM05D005295 ORTHO05D005962 2.0e-24 115.5 88 61.4
CSS0001236 Camellia sinensis var. sinensis HOM05D005295 ORTHO05D005962 2.7e-24 115.2 88 58.0
Glyma.13G273800 Glycine max HOM05D005295 ORTHO05D005962 4.5e-24 114.4 91 62.6
Lalb_Chr20g0109501 Lupinus albus HOM05D005295 ORTHO05D005962 1.0e-23 113.2 91 60.4
GSVIVG01014296001 Vitis vinifera HOM05D005295 ORTHO05D005962 1.0e-23 113.2 89 60.7
Duzib213G0204 Durio zibethinus HOM05D005295 ORTHO05D005962 1.3e-23 112.8 88 61.4
vmacro11885 Vaccinium macrocarpon HOM05D005295 ORTHO05D005962 1.7e-23 112.5 89 58.4
Cpa.g.sc622.2 Carica papaya HOM05D005295 ORTHO05D005962 2.2e-23 112.1 89 59.6
HanXRQChr12g0361161 Helianthus annuus HOM05D005295 ORTHO05D005962 2.2e-23 112.1 88 58.0
MD03G1231400 Malus domestica HOM05D005295 ORTHO05D005962 2.2e-23 112.1 88 59.1
Medtr2g078650 Medicago truncatula HOM05D005295 ORTHO05D005962 2.9e-23 111.7 88 59.1
Phvul.005G075000 Phaseolus vulgaris HOM05D005295 ORTHO05D005962 2.9e-23 111.7 88 59.1
Rhsim06G0201600 Rhododendron simsii HOM05D005295 ORTHO05D005962 2.9e-23 111.7 89 61.8
Cfa020562 Carpinus fangiana HOM05D005295 ORTHO05D005962 3.8e-23 111.3 88 55.7
EL10Ac4g08225 Beta vulgaris HOM05D005295 ORTHO05D005962 5.0e-23 110.9 88 59.1
Sabra16G0260000 Salix brachista HOM05D005295 ORTHO05D005962 6.5e-23 110.5 89 57.3
CiPaw.11G171800 Carya illinoinensis HOM05D005295 ORTHO05D005962 1.5e-22 109.4 88 59.1
Peaxi162Scf00000g00314 Petunia axillaris HOM05D005295 ORTHO05D005962 1.5e-22 109.4 83 62.7
Cc05_g11790 Coffea canephora HOM05D005295 ORTHO05D005962 2.5e-22 108.6 83 59.0
arahy.Tifrunner.gnm1.ann1.B1NQ7W Arachis hypogaea HOM05D005295 ORTHO05D005962 3.2e-22 108.2 89 56.2
Nn1g04175 Nelumbo nucifera HOM05D005295 ORTHO05D005962 3.2e-22 108.2 86 57.0
TPR.G7946 Trifolium pratense HOM05D005295 ORTHO05D005962 3.2e-22 108.2 86 58.1
Prupe.4G176600 Prunus persica HOM05D005295 ORTHO05D005962 4.2e-22 107.8 88 58.0
SGA_v2.0_scaffold34G13800 Striga asiatica HOM05D005295 ORTHO05D005962 4.2e-22 107.8 85 60.0
Gohir.A04G035200 Gossypium hirsutum HOM05D005295 ORTHO05D005962 5.5e-22 107.5 88 58.0
Solyc12g013910.2 Solanum lycopersicum HOM05D005295 ORTHO05D005962 5.5e-22 107.5 80 65.0
arahy.Tifrunner.gnm1.ann1.3CLR9I Arachis hypogaea HOM05D005295 ORTHO05D005962 7.2e-22 107.1 89 55.1
CANSAT56G1083 Cannabis sativa HOM05D005295 ORTHO05D005962 7.2e-22 107.1 89 52.8
Gorai.009G376000 Gossypium raimondii HOM05D005295 ORTHO05D005962 7.2e-22 107.1 88 56.8
Psat0s1402g0040 Pisum sativum HOM05D005295 ORTHO05D005962 7.2e-22 107.1 85 58.8
BcaC03g14369 Brassica carinata HOM05D005295 ORTHO05D005962 9.4e-22 106.7 85 57.6
C02p17830 Brassica napus HOM05D005295 ORTHO05D005962 9.4e-22 106.7 85 57.6
BolC2t07912H Brassica oleracea HOM05D005295 ORTHO05D005962 9.4e-22 106.7 85 57.6
COL.COLO4_36711 Corchorus olitorius HOM05D005295 ORTHO05D005962 9.4e-22 106.7 88 59.1
A02p10710 Brassica napus HOM05D005295 ORTHO05D005962 1.2e-21 106.3 85 57.6
C02p17850 Brassica napus HOM05D005295 ORTHO05D005962 1.2e-21 106.3 85 57.6
BraA02t06134Z Brassica rapa HOM05D005295 ORTHO05D005962 1.2e-21 106.3 85 57.6
Ca_03531_v3 Cicer arietinum L. HOM05D005295 ORTHO05D005962 1.2e-21 106.3 91 60.4
ECA234G3281 Erigeron canadensis HOM05D005295 ORTHO05D005962 1.2e-21 106.3 88 55.7
AUR62036172 Chenopodium quinoa HOM05D005295 ORTHO05D005962 2.1e-21 105.5 88 55.7
MELO3C025603.2 Cucumis melo HOM05D005295 ORTHO05D005962 2.1e-21 105.5 85 55.3
PGR083G0729 Punica granatum HOM05D005295 ORTHO05D005962 2.1e-21 105.5 83 61.4
Sopen12g005670 Solanum pennellii HOM05D005295 ORTHO05D005962 2.1e-21 105.5 81 64.2
Ah.06g184530 Amaranthus hybridus HOM05D005295 ORTHO05D005962 4.7e-21 104.4 88 54.5
Lsat_1_v5_gn_5_128440 Lactuca sativa HOM05D005295 ORTHO05D005962 4.7e-21 104.4 89 55.1
PGSC0003DMG400015366 Solanum tuberosum HOM05D005295 ORTHO05D005962 4.7e-21 104.4 80 63.8
CAN.G213.18 Capsicum annuum HOM05D005295 ORTHO05D005962 1.0e-20 103.2 81 61.7
Migut.M00784 Erythranthe guttata HOM05D005295 ORTHO05D005962 1.0e-20 103.2 83 56.6
FvH4_3g19520 Fragaria vesca HOM05D005295 ORTHO05D005962 1.0e-20 103.2 88 54.5
FAN11G0135 Fragaria x ananassa HOM05D005295 ORTHO05D005962 1.0e-20 103.2 88 54.5
SGA_v2.0_scaffold73G24237 Striga asiatica HOM05D005295 ORTHO05D005962 1.4e-20 102.8 87 54.0
FAN21G0215 Fragaria x ananassa HOM05D005295 ORTHO05D005962 2.3e-20 102.1 88 54.5
Lj8A154T78 Lonicera japonica HOM05D005295 ORTHO05D005962 2.3e-20 102.1 107 48.6
CsaV3_4G033520 Cucumis sativus L. HOM05D005295 ORTHO05D005962 5.2e-20 100.9 85 52.9
Eucgr.F01159 Eucalyptus grandis HOM05D005295 ORTHO05D005962 5.2e-20 100.9 88 54.5
FAN25G2205 Fragaria x ananassa HOM05D005295 ORTHO05D005962 5.2e-20 100.9 88 54.5
RcHm_v2.0_Chr5g0032761 Rosa chinensis HOM05D005295 ORTHO05D005962 1.2e-19 99.8 88 53.4
Aqoxy1G02337 Aquilegia oxysepala HOM05D005295 ORTHO05D005962 1.5e-19 99.4 86 53.5
BcaB05g22086 Brassica carinata HOM05D005295 ORTHO05D005962 1.5e-19 99.4 81 56.8
ClCG11G017890 Citrullus lanatus HOM05D005295 ORTHO05D005962 2.0e-19 99.0 85 51.8
Sed0001385 Sechium edule HOM05D005295 ORTHO05D005962 4.4e-19 97.8 87 49.4
BcaC03g14372 Brassica carinata HOM05D005295 ORTHO05D005962 7.5e-19 97.1 87 54.0
BolC2t07916H Brassica oleracea HOM05D005295 ORTHO05D005962 7.5e-19 97.1 87 54.0
SalBow8G4458 Salvia bowleyana HOM05D005295 ORTHO05D005962 2.8e-18 95.1 86 51.2
PSO675G2991 Papaver somniferum HOM05D005295 ORTHO05D005962 6.3e-18 94.0 86 50.0
unitig_0.g1149 Utricularia gibba HOM05D005295 ORTHO05D005962 7.0e-17 90.5 85 47.1
MBI02_g22345_MAGBIO Magnolia biondii HOM05D005295 ORTHO05D005962 7.7e-16 87.0 87 50.6
Atru.chr2.2424 Acer truncatum HOM05D005295 ORTHO05D005962 8.6e-15 83.6 116 40.5
Sc16g0007150 Simmondsia chinensis HOM05D005295 ORTHO05D005962 2.5e-14 82.0 67 56.7
Zm00001eb231100 Zea mays HOM05D005295 ORTHO05D005962 9.5e-14 80.1 86 50.0
AUR62019458 Chenopodium quinoa HOM05D005295 ORTHO05D005962 8.9e-12 73.6 66 50.0
ATR0150G019 Amborella trichopoda HOM05D005295 ORTHO05D005962 4.4e-11 71.2 81 38.3
Gohir.D05G348200 Gossypium hirsutum HOM05D005295 ORTHO05D005962 4.4e-11 71.2 88 40.9
CDE05G3097 Ceratophyllum demersum HOM05D006331 ORTHO05D008043 5.7e-11 70.9 80 47.5
HPP92_003730 Vanilla planifolia HOM05D005295 ORTHO05D005962 7.5e-11 70.5 83 39.8
Carub.0001s2750 Capsella rubella HOM05D005295 ORTHO05D005962 9.8e-11 70.1 43 65.1
CDE05G1939 Ceratophyllum demersum HOM05D005295 ORTHO05D005962 9.8e-11 70.1 86 44.2
Nitab4.5_0000332g0010 Nicotiana tabacum HOM05D005295 ORTHO05D005962 2.8e-10 68.6 87 48.3
SEGI_06803 Sequoiadendron giganteum HOM05D005295 ORTHO05D005962 2.8e-10 68.6 80 36.2
Hma1.2p1_0387F.1_g141930 Hydrangea macrophylla HOM05D005295 ORTHO05D005962 6.3e-10 67.4 49 57.1
SMO285G0011 Selaginella moellendorffii HOM05D005295 ORTHO05D005962 3.5e-08 61.6 80 33.8
HanXRQChr09g0239031 Helianthus annuus HOM05D005295 ORTHO05D005962 3.9e-07 58.2 74 43.2
HanXRQChr11g0352521 Helianthus annuus HOM05D005295 ORTHO05D005962 3.9e-07 58.2 74 43.2
Ciclev10010240m.g Citrus clementina HOM05D005295 ORTHO05D005962 6.6e-07 57.4 79 49.4
Pp3c9_10810 Physcomitrium patens HOM05D005295 ORTHO05D005962 1.1e-06 56.6 82 32.9


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