Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung01430 Brassica carinata HOM05D000163 ORTHO05D093283 2.4e-63 245.4 126 100.0
BcaNung01429 Brassica carinata HOM05D000163 ORTHO05D000219 1.4e-58 229.6 117 100.0
A09p07330 Brassica napus HOM05D000163 ORTHO05D000219 5.8e-41 171.0 117 76.9
C09p08270 Brassica napus HOM05D000163 ORTHO05D000219 7.5e-41 170.6 117 76.1
BolC9t53737H Brassica oleracea HOM05D000163 ORTHO05D000219 7.5e-41 170.6 117 76.1
BcaC04g23444 Brassica carinata HOM05D000163 ORTHO05D000219 9.8e-41 170.2 117 76.1
BraA09t36388Z Brassica rapa HOM05D000163 ORTHO05D000219 9.8e-41 170.2 117 76.9
Sp2g24750 Schrenkiella parvula HOM05D000163 ORTHO05D000219 6.4e-40 167.5 117 76.1
AL365U10010 Arabidopsis lyrata HOM05D000163 ORTHO05D000219 1.3e-37 159.8 117 73.5
AL8G38250 Arabidopsis lyrata HOM05D000163 ORTHO05D000219 1.3e-37 159.8 117 73.5
Thhalv10005349m.g Eutrema salsugineum HOM05D000163 ORTHO05D000219 1.5e-36 156.4 117 72.6
AT5G61550 Arabidopsis thaliana HOM05D000163 ORTHO05D000219 1.9e-36 156.0 117 70.9
C02p61540 Brassica napus HOM05D000163 ORTHO05D000219 1.9e-36 156.0 121 73.6
BraA02t09102Z Brassica rapa HOM05D000163 ORTHO05D000219 1.9e-36 156.0 121 73.6
BcaC03g18082 Brassica carinata HOM05D000163 ORTHO05D000219 7.3e-36 154.1 121 71.9
BolC2t12205H Brassica oleracea HOM05D000163 ORTHO05D000219 7.3e-36 154.1 121 71.9
BcaB07g29828 Brassica carinata HOM05D000163 ORTHO05D000219 4.7e-35 151.4 121 71.9
Carub.0008s2224 Capsella rubella HOM05D000163 ORTHO05D000219 8.1e-35 150.6 117 70.9
A03p47130 Brassica napus HOM05D000163 ORTHO05D000219 3.7e-32 141.7 122 68.0
BraA03t13841Z Brassica rapa HOM05D000163 ORTHO05D000219 3.7e-32 141.7 122 68.0
BcaC04g23443 Brassica carinata HOM05D000163 ORTHO05D000219 1.4e-31 139.8 116 67.2
C09p08280 Brassica napus HOM05D000163 ORTHO05D000219 1.4e-31 139.8 116 67.2
BolC7t45047H Brassica oleracea HOM05D000163 ORTHO05D000219 3.2e-31 138.7 128 65.6
BolC9t53738H Brassica oleracea HOM05D000163 ORTHO05D000219 4.1e-31 138.3 116 66.4
BraA09t36389Z Brassica rapa HOM05D000163 ORTHO05D000219 5.4e-31 137.9 117 66.7
A02p41600 Brassica napus HOM05D000163 ORTHO05D000219 2.5e-28 129.0 103 70.9
Aa31LG11G1870 Aethionema arabicum HOM05D000163 ORTHO05D000219 3.3e-28 128.6 124 64.5
CARHR275320 Cardamine hirsuta HOM05D000163 ORTHO05D000219 7.3e-28 127.5 118 62.7
BcaC06g33159 Brassica carinata HOM05D000163 ORTHO05D000219 1.6e-27 126.3 126 60.3
C07p45240 Brassica napus HOM05D000163 ORTHO05D000219 1.6e-27 126.3 126 60.3
BcaNung01426 Brassica carinata HOM05D000163 ORTHO05D000219 2.6e-25 119.0 116 57.8
THA.LOC104818312 Tarenaya hassleriana HOM05D000163 ORTHO05D000219 7.1e-15 84.3 71 62.0
THA.LOC104820162 Tarenaya hassleriana HOM05D000163 ORTHO05D000219 1.1e-12 77.0 72 55.6
BcaB07g29829 Brassica carinata HOM05D000163 ORTHO05D000219 1.3e-08 63.5 49 71.4
A09p07340 Brassica napus HOM05D000163 ORTHO05D000219 1.1e-07 60.5 56 62.5
A02p41610 Brassica napus HOM05D000163 ORTHO05D000219 9.3e-07 57.4 51 62.7
C02p61550 Brassica napus HOM05D000163 ORTHO05D000219 9.3e-07 57.4 51 62.7
BraA02t09103Z Brassica rapa HOM05D000163 ORTHO05D000219 9.3e-07 57.4 51 62.7


User provided reference genes

Program Settings