Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung00805 Brassica carinata HOM05D005694 ORTHO05D007402 1.2e-74 283.1 141 100.0
BcaC05g29844 Brassica carinata HOM05D005694 ORTHO05D007402 1.0e-17 94.0 98 57.1
BolC5t34672H Brassica oleracea HOM05D005694 ORTHO05D007402 1.0e-17 94.0 98 57.1
BraA05t22832Z Brassica rapa HOM05D005694 ORTHO05D007402 1.3e-17 93.6 88 61.4
C05p60220 Brassica napus HOM05D005694 ORTHO05D007402 2.2e-17 92.8 98 56.1
A05p41050 Brassica napus HOM05D005694 ORTHO05D007402 5.5e-16 88.2 72 65.3
BcaB06g28844 Brassica carinata HOM05D005694 ORTHO05D007402 1.2e-15 87.0 96 54.2
AL8G44040 Arabidopsis lyrata HOM05D005694 ORTHO05D007402 1.6e-15 86.7 72 63.9
Carub.0008s2721 Capsella rubella HOM05D005694 ORTHO05D007402 2.7e-15 85.9 72 61.1
AT5G67290 Arabidopsis thaliana HOM05D005694 ORTHO05D007402 3.6e-15 85.5 72 62.5
Nitab4.5_0003962g0030 Nicotiana tabacum HOM05D005694 ORTHO05D007402 1.4e-14 83.6 91 51.6
Solyc03g044190.3 Solanum lycopersicum HOM05D005694 ORTHO05D007402 1.8e-14 83.2 80 56.2
Sopen03g008170 Solanum pennellii HOM05D005694 ORTHO05D007402 1.8e-14 83.2 80 56.2
PGSC0003DMG400014873 Solanum tuberosum HOM05D005694 ORTHO05D007402 1.8e-14 83.2 80 56.2
Lsat_1_v5_gn_3_88661 Lactuca sativa HOM05D005694 ORTHO05D007402 3.0e-14 82.4 69 59.4
CARHR280330 Cardamine hirsuta HOM05D005694 ORTHO05D007402 3.9e-14 82.0 69 60.9
Thhalv10004317m.g Eutrema salsugineum HOM05D005694 ORTHO05D007402 3.9e-14 82.0 69 62.3
Gorai.007G218000 Gossypium raimondii HOM05D005694 ORTHO05D007402 5.2e-14 81.6 72 58.3
Sp2g29370 Schrenkiella parvula HOM05D005694 ORTHO05D007402 6.7e-14 81.3 72 61.1
Aa31LG1G15820 Aethionema arabicum HOM05D005694 ORTHO05D007402 8.8e-14 80.9 80 55.0
Duzib147G1433 Durio zibethinus HOM05D005694 ORTHO05D007402 8.8e-14 80.9 69 59.4
Migut.H00394 Erythranthe guttata HOM05D005694 ORTHO05D007402 8.8e-14 80.9 89 52.8
Gohir.A11G220300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 8.8e-14 80.9 83 54.2
Gohir.D11G203300 Gossypium hirsutum HOM05D005694 ORTHO05D007402 8.8e-14 80.9 72 58.3
MSTRG.2849 Avicennia marina HOM05D005694 ORTHO05D007402 1.1e-13 80.5 80 53.8
HanXRQChr12g0377261 Helianthus annuus HOM05D005694 ORTHO05D007402 1.1e-13 80.5 79 53.2
Nitab4.5_0002657g0010 Nicotiana tabacum HOM05D005694 ORTHO05D007402 1.5e-13 80.1 76 55.3
Duzib264G0643 Durio zibethinus HOM05D005694 ORTHO05D007402 2.0e-13 79.7 69 59.4
Thecc.01G063300 Theobroma cacao HOM05D005694 ORTHO05D007402 2.0e-13 79.7 69 59.4
arahy.Tifrunner.gnm1.ann1.MA1EVV Arachis hypogaea HOM05D005694 ORTHO05D007402 2.6e-13 79.3 77 55.8
arahy.Tifrunner.gnm1.ann1.ZT89Y7 Arachis hypogaea HOM05D005694 ORTHO05D007402 2.6e-13 79.3 77 55.8
Ciclev10025664m.g Citrus clementina HOM05D005694 ORTHO05D007402 2.6e-13 79.3 72 55.6
MELO3C007585.2 Cucumis melo HOM05D005694 ORTHO05D007402 2.6e-13 79.3 69 56.5
Aa31LG1G15840 Aethionema arabicum HOM05D005694 ORTHO05D007402 3.3e-13 79.0 69 59.4
Cc11_g04760 Coffea canephora HOM05D005694 ORTHO05D007402 3.3e-13 79.0 69 58.0
COL.COLO4_11482 Corchorus olitorius HOM05D005694 ORTHO05D007402 3.3e-13 79.0 69 59.4
ECA246G1807 Erigeron canadensis HOM05D005694 ORTHO05D007402 3.3e-13 79.0 87 50.6
Peaxi162Scf00365g00618 Petunia axillaris HOM05D005694 ORTHO05D007402 3.3e-13 79.0 76 55.3
EL10Ac6g15690 Beta vulgaris HOM05D005694 ORTHO05D007402 4.4e-13 78.6 69 58.0
Psat4g084360 Pisum sativum HOM05D005694 ORTHO05D007402 4.4e-13 78.6 90 51.1
SGA_v2.0_scaffold143G35788 Striga asiatica HOM05D005694 ORTHO05D007402 4.4e-13 78.6 78 52.6
CsaV3_6G043550 Cucumis sativus L. HOM05D005694 ORTHO05D007402 5.7e-13 78.2 69 55.1
Oeu037163.1 Olea europaea HOM05D005694 ORTHO05D007402 5.7e-13 78.2 81 48.1
ClCG01G017080 Citrullus lanatus HOM05D005694 ORTHO05D007402 7.4e-13 77.8 69 56.5
Manes.12G108400 Manihot esculenta HOM05D005694 ORTHO05D007402 7.4e-13 77.8 69 56.5
Cpa.g.sc6.99 Carica papaya HOM05D005694 ORTHO05D007402 9.7e-13 77.4 121 41.3
Sabra05G0051000 Salix brachista HOM05D005694 ORTHO05D007402 9.7e-13 77.4 76 52.6
Atru.chr3.251 Acer truncatum HOM05D005694 ORTHO05D007402 1.3e-12 77.0 69 56.5
Potri.005G060500 Populus trichocarpa HOM05D005694 ORTHO05D007402 1.3e-12 77.0 76 52.6
THA.LOC104819246 Tarenaya hassleriana HOM05D005694 ORTHO05D007402 1.3e-12 77.0 69 58.0
CANSAT25G2140 Cannabis sativa HOM05D005694 ORTHO05D007402 1.7e-12 76.6 81 50.6
AUR62003938 Chenopodium quinoa HOM05D005694 ORTHO05D007402 1.7e-12 76.6 103 45.6
Lalb_Chr16g0388811 Lupinus albus HOM05D005694 ORTHO05D007402 1.7e-12 76.6 77 51.9
Medtr4g094962 Medicago truncatula HOM05D005694 ORTHO05D007402 1.7e-12 76.6 77 51.9
CANSAT25G0291 Cannabis sativa HOM05D005694 ORTHO05D007402 2.2e-12 76.3 81 49.4
AUR62038254 Chenopodium quinoa HOM05D005694 ORTHO05D007402 2.2e-12 76.3 127 40.2
CiPaw.01G012900 Carya illinoinensis HOM05D005694 ORTHO05D007402 2.8e-12 75.9 69 55.1
Lj7C77T1 Lonicera japonica HOM05D005694 ORTHO05D007402 2.8e-12 75.9 69 55.1
Prupe.6G229100 Prunus persica HOM05D005694 ORTHO05D007402 2.8e-12 75.9 77 50.6
TAR625G0317 Trochodendron aralioides HOM05D005694 ORTHO05D007402 2.8e-12 75.9 69 56.5
Glyma.17G167200 Glycine max HOM05D005694 ORTHO05D007402 3.7e-12 75.5 80 51.2
PGR004G1079 Punica granatum HOM05D005694 ORTHO05D007402 3.7e-12 75.5 69 56.5
QL06p040237 Quercus lobata HOM05D005694 ORTHO05D007402 3.7e-12 75.5 85 50.6
Rhsim10G0112600 Rhododendron simsii HOM05D005694 ORTHO05D007402 3.7e-12 75.5 69 53.6
RcHm_v2.0_Chr2g0106661 Rosa chinensis HOM05D005694 ORTHO05D007402 3.7e-12 75.5 90 47.8
VMungo0251G0564 Vigna mungo HOM05D005694 ORTHO05D007402 6.3e-12 74.7 81 49.4
CSS0006569 Camellia sinensis var. sinensis HOM05D005694 ORTHO05D007402 8.2e-12 74.3 69 52.2
FAN19G0282 Fragaria x ananassa HOM05D005694 ORTHO05D007402 8.2e-12 74.3 113 41.6
FAN26G1197 Fragaria x ananassa HOM05D005694 ORTHO05D007402 8.2e-12 74.3 113 41.6
Lj4g0009127 Lotus japonicus HOM05D005694 ORTHO05D007402 8.2e-12 74.3 82 50.0
Hund16366 Selenicereus undatus HOM05D005694 ORTHO05D007402 8.2e-12 74.3 69 52.2
TPR.G23863 Trifolium pratense HOM05D005694 ORTHO05D007402 8.2e-12 74.3 78 51.3
FvH4_1g16760 Fragaria vesca HOM05D005694 ORTHO05D007402 1.1e-11 73.9 113 41.6
vmacro05254 Vaccinium macrocarpon HOM05D005694 ORTHO05D007402 1.1e-11 73.9 69 52.2
Ca_22124_v3 Cicer arietinum L. HOM05D005694 ORTHO05D007402 1.8e-11 73.2 69 55.1
Dinv26866 Davidia involucrata HOM05D005694 ORTHO05D007402 1.8e-11 73.2 69 53.6
Lj4g0018653 Lotus japonicus HOM05D005694 ORTHO05D007402 1.8e-11 73.2 78 50.0
FAN23G2399 Fragaria x ananassa HOM05D005694 ORTHO05D007402 2.4e-11 72.8 113 40.7
ATR1098G030 Amborella trichopoda HOM05D005694 ORTHO05D007402 3.1e-11 72.4 69 50.7
PSO541G0377 Papaver somniferum HOM05D005694 ORTHO05D007402 3.1e-11 72.4 69 52.2
TAR625G0863 Trochodendron aralioides HOM05D005694 ORTHO05D007402 3.1e-11 72.4 66 56.1
Cfa004061 Carpinus fangiana HOM05D005694 ORTHO05D007402 4.1e-11 72.0 78 47.4
Haze_15351 Corylus avellana HOM05D005694 ORTHO05D007402 4.1e-11 72.0 69 52.2
Phvul.003G240300 Phaseolus vulgaris HOM05D005694 ORTHO05D007402 5.3e-11 71.6 69 53.6
Sed0004561 Sechium edule HOM05D005694 ORTHO05D007402 5.3e-11 71.6 69 53.6
unitig_46.g18707 Utricularia gibba HOM05D005694 ORTHO05D007402 7.0e-11 71.2 109 41.3
Dinv30033 Davidia involucrata HOM05D005694 ORTHO05D007402 9.1e-11 70.9 66 51.5
Actinidia12019 Actinidia chinensis HOM05D005694 ORTHO05D007402 1.2e-10 70.5 64 53.1
Mapoly0178s0017 Marchantia polymorpha HOM05D005694 ORTHO05D007402 1.2e-10 70.5 103 39.8
Mapoly0178s0018 Marchantia polymorpha HOM05D005694 ORTHO05D007402 1.2e-10 70.5 103 39.8
Glyma.05G097800 Glycine max HOM05D005694 ORTHO05D007402 1.6e-10 70.1 81 48.1
Aqoxy6G02871 Aquilegia oxysepala HOM05D005694 ORTHO05D007402 2.0e-10 69.7 81 46.9
Sc16g0005230 Simmondsia chinensis HOM05D005694 ORTHO05D007402 2.0e-10 69.7 84 44.0
MD02G1178800 Malus domestica HOM05D005694 ORTHO05D007402 4.5e-10 68.6 66 53.0
Aa31LG1G18440 Aethionema arabicum HOM05D005694 ORTHO05D007402 5.9e-10 68.2 46 71.7
Pp3c14_12180 Physcomitrium patens HOM05D005694 ORTHO05D007402 5.9e-10 68.2 77 46.8
Eucgr.I00761 Eucalyptus grandis HOM05D005694 ORTHO05D007402 1.0e-09 67.4 69 52.2
Eucgr.I00787 Eucalyptus grandis HOM05D005694 ORTHO05D007402 1.0e-09 67.4 69 52.2
TAR381G0027 Trochodendron aralioides HOM05D005694 ORTHO05D007402 1.0e-09 67.4 64 53.1
TAR381G0285 Trochodendron aralioides HOM05D005694 ORTHO05D007402 1.0e-09 67.4 64 53.1
PSO675G2151 Papaver somniferum HOM05D005694 ORTHO05D007402 1.3e-09 67.0 69 50.7
AagrBONN_evm.TU.Sc2ySwM_117.3787 Anthoceros agrestis HOM05D005694 ORTHO05D007402 3.8e-09 65.5 68 50.0
SMO367G0384 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 3.8e-09 65.5 69 46.4
HPP92_017733 Vanilla planifolia HOM05D005694 ORTHO05D007402 5.0e-09 65.1 71 49.3
Nn1g04704 Nelumbo nucifera HOM05D005694 ORTHO05D007402 1.1e-08 63.9 66 48.5
Sc16g0005220 Simmondsia chinensis HOM05D005694 ORTHO05D007402 1.5e-08 63.5 84 41.7
SMO351G0208 Selaginella moellendorffii HOM05D005694 ORTHO05D007402 1.9e-08 63.2 68 50.0
DCAR_025759 Daucus carota HOM05D005694 ORTHO05D007402 5.5e-08 61.6 46 60.9
HanXRQChr02g0044351 Helianthus annuus HOM05D005694 ORTHO05D007402 9.4e-08 60.8 119 36.1
HPP92_017700 Vanilla planifolia HOM05D005694 ORTHO05D007402 1.2e-07 60.5 69 47.8
SEGI_26559 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 1.6e-07 60.1 89 41.6
SEGI_01647 Sequoiadendron giganteum HOM05D005694 ORTHO05D007402 4.7e-07 58.5 69 44.9
CDE06G0326 Ceratophyllum demersum HOM05D005694 ORTHO05D007402 1.0e-06 57.4 102 37.3
Zm00001eb300250 Zea mays HOM05D005694 ORTHO05D007402 1.0e-06 57.4 87 42.5
MCO03G407 Micromonas commoda HOM05D005694 ORTHO05D007402 1.8e-06 56.6 76 39.5
Os07g0155100 Oryza sativa ssp. japonica HOM05D005694 ORTHO05D007402 5.2e-06 55.1 86 40.7
ECA238G4251 Erigeron canadensis HOM05D005694 ORTHO05D007402 8.8e-06 54.3 81 39.5


User provided reference genes

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