Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung00687 Brassica carinata HOM05D001749 ORTHO05D001632 1.2e-104 383.3 202 100.0
BolC1t00411H Brassica oleracea HOM05D001749 ORTHO05D001632 2.1e-101 372.5 214 93.9
C01p04240 Brassica napus HOM05D001749 ORTHO05D001632 9.7e-99 363.6 214 91.6
A01p03930 Brassica napus HOM05D001749 ORTHO05D001632 6.1e-93 344.4 214 88.3
BraA01t00380Z Brassica rapa HOM05D001749 ORTHO05D001632 1.2e-91 340.1 214 87.4
Thhalv10027578m.g Eutrema salsugineum HOM05D001749 ORTHO05D001632 5.2e-76 288.1 219 74.9
A03p62950 Brassica napus HOM05D001749 ORTHO05D001632 2.0e-72 276.2 220 71.4
BraA03t15370Z Brassica rapa HOM05D001749 ORTHO05D001632 2.0e-72 276.2 220 71.4
C07p60620 Brassica napus HOM05D001749 ORTHO05D001632 1.3e-71 273.5 220 70.9
Carub.0007s0573 Capsella rubella HOM05D001749 ORTHO05D001632 2.3e-71 272.7 219 69.9
Sp7g32350 Schrenkiella parvula HOM05D001749 ORTHO05D001632 2.9e-71 272.3 209 73.7
BolC7t46492H Brassica oleracea HOM05D001749 ORTHO05D001632 6.6e-71 271.2 220 70.0
CARHR242840 Cardamine hirsuta HOM05D001749 ORTHO05D001632 9.5e-70 267.3 216 70.4
AT4G34560 Arabidopsis thaliana HOM05D001749 ORTHO05D001632 4.4e-67 258.5 219 68.9
AL7G16650 Arabidopsis lyrata HOM05D001749 ORTHO05D001632 2.3e-63 246.1 210 69.5
THA.LOC104807305 Tarenaya hassleriana HOM05D001749 ORTHO05D001632 4.4e-43 178.7 223 51.1
Aa31LG2G15960 Aethionema arabicum HOM05D001749 ORTHO05D001632 2.9e-42 176.0 205 54.6
THA.LOC104819615 Tarenaya hassleriana HOM05D001749 ORTHO05D001632 9.0e-36 154.5 223 46.6
FvH4_2g09200 Fragaria vesca HOM05D001749 ORTHO05D001632 3.1e-20 102.8 225 34.7
FAN15G1825 Fragaria x ananassa HOM05D001749 ORTHO05D001632 3.1e-20 102.8 225 34.7
FAN24G3069 Fragaria x ananassa HOM05D001749 ORTHO05D001632 4.0e-20 102.4 225 34.7
RcHm_v2.0_Chr6g0265051 Rosa chinensis HOM05D001749 ORTHO05D001632 3.4e-19 99.4 225 34.7
MD05G1064000 Malus domestica HOM05D001749 ORTHO05D001632 5.8e-19 98.6 226 33.2
COL.COLO4_25968 Corchorus olitorius HOM05D001749 ORTHO05D001632 2.2e-18 96.7 224 34.8
Sabra09G0091300 Salix brachista HOM05D001749 ORTHO05D001632 2.2e-18 96.7 226 35.0
MD10G1072700 Malus domestica HOM05D001749 ORTHO05D001632 1.4e-17 94.0 224 31.7
FAN27G1258 Fragaria x ananassa HOM05D001749 ORTHO05D001632 4.2e-17 92.4 225 31.6
QL11p044367 Quercus lobata HOM05D001749 ORTHO05D001632 9.3e-17 91.3 219 33.3
Prupe.8G094100 Prunus persica HOM05D001749 ORTHO05D001632 1.6e-16 90.5 226 34.1
Duzib132G0910 Durio zibethinus HOM05D001749 ORTHO05D001632 2.1e-16 90.1 220 32.7
CiPaw.06G133900 Carya illinoinensis HOM05D001749 ORTHO05D001632 2.7e-16 89.7 221 32.1
Thecc.02G082100 Theobroma cacao HOM05D001749 ORTHO05D001632 2.7e-16 89.7 220 33.2
Atru.chr5.3055 Acer truncatum HOM05D001749 ORTHO05D001632 4.6e-16 89.0 221 31.7
Potri.009G119000 Populus trichocarpa HOM05D001749 ORTHO05D001632 4.6e-16 89.0 226 33.2
Ciclev10029211m.g Citrus clementina HOM05D001749 ORTHO05D001632 1.3e-15 87.4 225 30.2
Cfa005037 Carpinus fangiana HOM05D001749 ORTHO05D001632 3.9e-15 85.9 210 32.9
Cpa.g.sc106.17 Carica papaya HOM05D001749 ORTHO05D001632 5.1e-15 85.5 258 29.1
ClCG11G004240 Citrullus lanatus HOM05D001749 ORTHO05D001632 6.7e-15 85.1 229 29.3
Manes.11G085200 Manihot esculenta HOM05D001749 ORTHO05D001632 8.7e-15 84.7 230 30.0
Potri.004G157300 Populus trichocarpa HOM05D001749 ORTHO05D001632 1.9e-14 83.6 225 32.9
Eucgr.I01283 Eucalyptus grandis HOM05D001749 ORTHO05D001632 2.5e-14 83.2 233 33.5
Duzib052G0040 Durio zibethinus HOM05D001749 ORTHO05D001632 4.3e-14 82.4 220 31.4
Duzib248G0723 Durio zibethinus HOM05D001749 ORTHO05D001632 4.3e-14 82.4 213 32.9
Manes.04G074762 Manihot esculenta HOM05D001749 ORTHO05D001632 4.3e-14 82.4 227 32.6
Gohir.A03G196000 Gossypium hirsutum HOM05D001749 ORTHO05D001632 7.4e-14 81.6 212 33.0
CsaV3_2G014930 Cucumis sativus L. HOM05D001749 ORTHO05D001632 9.6e-14 81.3 230 31.3
Glyma.11G115300 Glycine max HOM05D001749 ORTHO05D001632 1.6e-13 80.5 218 30.3
Haze_02350 Corylus avellana HOM05D001749 ORTHO05D001632 2.1e-13 80.1 213 31.5
Gorai.013G035600 Gossypium raimondii HOM05D001749 ORTHO05D001632 2.1e-13 80.1 223 32.3
EL10Ac9g21701 Beta vulgaris HOM05D001749 ORTHO05D001632 3.7e-13 79.3 223 30.5
Nn5g29676 Nelumbo nucifera HOM05D001749 ORTHO05D001632 3.7e-13 79.3 233 30.0
Gohir.D13G031200 Gossypium hirsutum HOM05D001749 ORTHO05D001632 4.8e-13 79.0 222 32.4
Gorai.005G245100 Gossypium raimondii HOM05D001749 ORTHO05D001632 4.8e-13 79.0 212 32.1
Dinv23498 Davidia involucrata HOM05D001749 ORTHO05D001632 1.1e-12 77.8 210 32.9
Gohir.D02G217101 Gossypium hirsutum HOM05D001749 ORTHO05D001632 2.4e-12 76.6 212 31.6
Glyma.12G041200 Glycine max HOM05D001749 ORTHO05D001632 3.1e-12 76.3 215 29.3
CiPaw.05G066900 Carya illinoinensis HOM05D001749 ORTHO05D001632 4.1e-12 75.9 218 29.4
Cc02_g17320 Coffea canephora HOM05D001749 ORTHO05D001632 5.3e-12 75.5 244 31.1
MELO3C023313.2 Cucumis melo HOM05D001749 ORTHO05D001632 5.3e-12 75.5 235 28.9
Gohir.A13G033300 Gossypium hirsutum HOM05D001749 ORTHO05D001632 5.3e-12 75.5 230 30.4
Hma1.2p1_0066F.1_g036220 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 5.3e-12 75.5 219 29.2
Phvul.011G043200 Phaseolus vulgaris HOM05D001749 ORTHO05D001632 5.3e-12 75.5 210 28.1
VMungo0251G1135 Vigna mungo HOM05D001749 ORTHO05D001632 9.0e-12 74.7 212 26.9
Oeu041631.1 Olea europaea HOM05D001749 ORTHO05D001632 1.2e-11 74.3 215 31.6
TAR628G1444 Trochodendron aralioides HOM05D001749 ORTHO05D001632 2.0e-11 73.6 240 28.8
CANSAT11G0884 Cannabis sativa HOM05D001749 ORTHO05D001632 7.6e-11 71.6 240 29.2
Haze_02351 Corylus avellana HOM05D001749 ORTHO05D001632 7.6e-11 71.6 222 29.7
CiPaw.06G133800 Carya illinoinensis HOM05D001749 ORTHO05D001632 1.0e-10 71.2 222 30.6
Nn1g04912 Nelumbo nucifera HOM05D001749 ORTHO05D001632 1.0e-10 71.2 236 29.2
Sabra04G0105300 Salix brachista HOM05D001749 ORTHO05D001632 1.3e-10 70.9 237 30.4
Migut.B00219 Erythranthe guttata HOM05D001749 ORTHO05D001632 2.9e-10 69.7 220 31.8
Cfa005035 Carpinus fangiana HOM05D001749 ORTHO05D001632 3.8e-10 69.3 221 29.4
TAR625G0803 Trochodendron aralioides HOM05D001749 ORTHO05D001632 3.8e-10 69.3 226 27.4
Sed0016213 Sechium edule HOM05D001749 ORTHO05D001632 6.5e-10 68.6 269 24.5
TWI79G0604 Tripterygium wilfordii HOM05D001749 ORTHO05D001632 8.4e-10 68.2 223 30.9
Sopen01g051990 Solanum pennellii HOM05D001749 ORTHO05D001632 1.4e-09 67.4 224 33.0
Oeu061220.1 Olea europaea HOM05D001749 ORTHO05D001632 1.9e-09 67.0 224 29.5
PGR142G0388 Punica granatum HOM05D001749 ORTHO05D001632 2.5e-09 66.6 207 29.0
Migut.N01252 Erythranthe guttata HOM05D001749 ORTHO05D001632 4.2e-09 65.9 216 31.9
Cpa.g.sc1139.1 Carica papaya HOM05D001749 ORTHO05D001632 9.3e-09 64.7 247 25.5
Hma1.2p1_0224F.1_g094445 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 2.1e-08 63.5 225 27.6
Hma1.2p1_2993F.1_g331370 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 2.1e-08 63.5 225 27.6
GSVIVG01018920001 Vitis vinifera HOM05D001749 ORTHO05D001632 3.5e-08 62.8 200 31.0
Lalb_Chr11g0061321 Lupinus albus HOM05D001749 ORTHO05D001632 4.6e-08 62.4 266 27.8
PGSC0003DMG400000715 Solanum tuberosum HOM05D001749 ORTHO05D001632 4.6e-08 62.4 205 29.3
TWI31G0051 Tripterygium wilfordii HOM05D001749 ORTHO05D001632 4.6e-08 62.4 197 31.0
Glyma.04G011000 Glycine max HOM05D001749 ORTHO05D001632 6.1e-08 62.0 213 29.6
VMungo1309G2481 Vigna mungo HOM05D001749 ORTHO05D001632 6.1e-08 62.0 223 30.5
Nitab4.5_0000199g0040 Nicotiana tabacum HOM05D001749 ORTHO05D001632 1.0e-07 61.2 222 26.1
Peaxi162Scf00684g00210 Petunia axillaris HOM05D001749 ORTHO05D001632 1.0e-07 61.2 251 27.5
Rhsim11G0179200 Rhododendron simsii HOM05D001749 ORTHO05D001632 1.3e-07 60.8 217 29.5
TAR381G0807 Trochodendron aralioides HOM05D001749 ORTHO05D001632 1.3e-07 60.8 231 26.4
Rhsim08G0119900 Rhododendron simsii HOM05D001749 ORTHO05D001632 1.8e-07 60.5 235 28.5
SalBow6G3784 Salvia bowleyana HOM05D001749 ORTHO05D001632 2.3e-07 60.1 224 29.9
MSTRG.5404 Avicennia marina HOM05D001749 ORTHO05D001632 3.9e-07 59.3 221 28.5
CSS0035839 Camellia sinensis var. sinensis HOM05D001749 ORTHO05D001632 3.9e-07 59.3 231 27.3
Manes.02G096700 Manihot esculenta HOM05D001749 ORTHO05D001632 3.9e-07 59.3 258 27.5
Phvul.009G022300 Phaseolus vulgaris HOM05D001749 ORTHO05D001632 3.9e-07 59.3 212 28.8
TWI79G0729 Tripterygium wilfordii HOM05D001749 ORTHO05D001632 3.9e-07 59.3 202 28.7
Dinv40015 Davidia involucrata HOM05D001749 ORTHO05D001632 8.7e-07 58.2 238 26.5
Duzib147G1275 Durio zibethinus HOM05D001749 ORTHO05D001632 1.5e-06 57.4 241 27.0
Actinidia00539 Actinidia chinensis HOM05D001749 ORTHO05D001632 1.9e-06 57.0 219 28.3
Ca_20902_v3 Cicer arietinum L. HOM05D001749 ORTHO05D001632 1.9e-06 57.0 168 32.1
Medtr4g070640 Medicago truncatula HOM05D001749 ORTHO05D001632 1.9e-06 57.0 210 24.8
CSS0042795 Camellia sinensis var. sinensis HOM05D001749 ORTHO05D001632 3.3e-06 56.2 228 26.8
Gohir.D12G063200 Gossypium hirsutum HOM05D001749 ORTHO05D001632 3.3e-06 56.2 236 26.3
SGA_v2.0_scaffold58G20512 Striga asiatica HOM05D001749 ORTHO05D001632 5.7e-06 55.5 213 31.0
MSTRG.27689 Avicennia marina HOM05D001749 ORTHO05D001632 7.4e-06 55.1 221 31.2
Gohir.A11G182600 Gossypium hirsutum HOM05D001749 ORTHO05D001632 7.4e-06 55.1 237 26.6
MBI16_g30353_MAGBIO Magnolia biondii HOM05D001749 ORTHO05D001632 7.4e-06 55.1 221 26.7
Aqoxy6G01165 Aquilegia oxysepala HOM05D001749 ORTHO05D001632 9.7e-06 54.7 250 25.6
CAN.G1058.9 Capsicum annuum HOM05D001749 ORTHO05D001632 9.7e-06 54.7 251 26.3
Haze_02352 Corylus avellana HOM05D001749 ORTHO05D001632 9.7e-06 54.7 162 31.5
Glyma.06G010900 Glycine max HOM05D001749 ORTHO05D001632 9.7e-06 54.7 231 28.1


User provided reference genes

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