Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaNung00661 Brassica carinata HOM05D004464 ORTHO05D005135 4.7e-67 257.7 125 100.0
BcaNung00660 Brassica carinata HOM05D004464 ORTHO05D005135 1.3e-64 249.6 135 92.6
C03p08530 Brassica napus HOM05D004464 ORTHO05D005135 2.2e-56 222.2 158 74.7
BcaB01g05028 Brassica carinata HOM05D004464 ORTHO05D005135 4.8e-56 221.1 158 72.8
BraA03t10058Z Brassica rapa HOM05D004464 ORTHO05D005135 2.4e-55 218.8 158 72.8
A03p07340 Brassica napus HOM05D004464 ORTHO05D005135 5.3e-55 217.6 158 72.8
Sp6g28370 Schrenkiella parvula HOM05D004464 ORTHO05D005135 5.9e-54 214.2 158 70.3
BcaNung02202 Brassica carinata HOM05D004464 ORTHO05D005135 1.5e-52 209.5 158 69.0
A02p03200 Brassica napus HOM05D004464 ORTHO05D005135 7.2e-52 207.2 158 69.0
BraA02t05291Z Brassica rapa HOM05D004464 ORTHO05D005135 7.2e-52 207.2 158 69.0
BcaC03g18447 Brassica carinata HOM05D004464 ORTHO05D005135 1.6e-51 206.1 158 69.0
C02p07950 Brassica napus HOM05D004464 ORTHO05D005135 1.6e-51 206.1 158 69.0
BolC2t06718H Brassica oleracea HOM05D004464 ORTHO05D005135 1.6e-51 206.1 158 69.0
Duzib170G0747 Durio zibethinus HOM05D004464 ORTHO05D005135 4.0e-50 201.4 133 72.9
Gohir.A05G003100 Gossypium hirsutum HOM05D004464 ORTHO05D005135 4.0e-50 201.4 158 65.2
AT5G15750 Arabidopsis thaliana HOM05D004464 ORTHO05D005135 1.2e-49 199.9 158 65.8
CARHR197580 Cardamine hirsuta HOM05D004464 ORTHO05D005135 1.2e-49 199.9 158 67.1
Duzib150G0689 Durio zibethinus HOM05D004464 ORTHO05D005135 2.6e-49 198.7 158 63.9
Gohir.D05G003500 Gossypium hirsutum HOM05D004464 ORTHO05D005135 2.6e-49 198.7 158 63.9
Gorai.009G003100 Gossypium raimondii HOM05D004464 ORTHO05D005135 2.6e-49 198.7 158 63.9
AL6G26590 Arabidopsis lyrata HOM05D004464 ORTHO05D005135 2.2e-48 195.7 158 65.2
Aa31LG11G13830 Aethionema arabicum HOM05D004464 ORTHO05D005135 2.8e-48 195.3 158 63.9
Thecc.01G298100 Theobroma cacao HOM05D004464 ORTHO05D005135 3.7e-48 194.9 158 62.7
Aa31LG2G910 Aethionema arabicum HOM05D004464 ORTHO05D005135 4.8e-48 194.5 158 63.9
Carub.0004s0609 Capsella rubella HOM05D004464 ORTHO05D005135 1.1e-47 193.4 158 64.6
Carub.0006s1390 Capsella rubella HOM05D004464 ORTHO05D005135 1.1e-47 193.4 158 64.6
THA.LOC104820981 Tarenaya hassleriana HOM05D004464 ORTHO05D005135 1.4e-47 193.0 158 63.3
COL.COLO4_21291 Corchorus olitorius HOM05D004464 ORTHO05D005135 1.8e-47 192.6 158 62.0
Glyma.10G232700 Glycine max HOM05D004464 ORTHO05D005135 2.4e-47 192.2 158 62.0
Glyma.20G161600 Glycine max HOM05D004464 ORTHO05D005135 2.4e-47 192.2 158 62.0
CDE10G0562 Ceratophyllum demersum HOM05D004464 ORTHO05D005135 7.0e-47 190.7 156 61.5
GSVIVG01036537001 Vitis vinifera HOM05D004464 ORTHO05D005135 1.2e-46 189.9 158 60.8
Phvul.007G072900 Phaseolus vulgaris HOM05D004464 ORTHO05D005135 2.0e-46 189.1 158 61.4
Ciclev10012892m.g Citrus clementina HOM05D004464 ORTHO05D005135 4.5e-46 188.0 158 60.8
HanXRQChr15g0490131 Helianthus annuus HOM05D004464 ORTHO05D005135 7.7e-46 187.2 158 60.8
TAR371G0146 Trochodendron aralioides HOM05D004464 ORTHO05D005135 7.7e-46 187.2 158 60.8
MSTRG.15432 Avicennia marina HOM05D004464 ORTHO05D005135 1.0e-45 186.8 158 60.8
unitig_0.g1789 Utricularia gibba HOM05D004464 ORTHO05D005135 1.3e-45 186.4 158 59.5
CDE10G0456 Ceratophyllum demersum HOM05D004464 ORTHO05D005135 1.7e-45 186.0 158 58.9
Eucgr.J01412 Eucalyptus grandis HOM05D004464 ORTHO05D005135 1.7e-45 186.0 158 59.5
PGR042G1328 Punica granatum HOM05D004464 ORTHO05D005135 1.7e-45 186.0 158 59.5
Zm00001eb280020 Zea mays HOM05D004464 ORTHO05D005135 2.9e-45 185.3 133 66.2
Atru.chr12.814 Acer truncatum HOM05D004464 ORTHO05D005135 3.8e-45 184.9 158 60.1
Prupe.3G248300 Prunus persica HOM05D004464 ORTHO05D005135 3.8e-45 184.9 158 58.2
Lj3g0020854 Lotus japonicus HOM05D004464 ORTHO05D005135 6.5e-45 184.1 158 58.9
Lj4g0017621 Lotus japonicus HOM05D004464 ORTHO05D005135 6.5e-45 184.1 158 58.9
Manes.01G100100 Manihot esculenta HOM05D004464 ORTHO05D005135 6.5e-45 184.1 158 58.9
SGA_v2.0_scaffold148G36455 Striga asiatica HOM05D004464 ORTHO05D005135 1.1e-44 183.3 158 59.5
SGA_v2.0_scaffold163G37992 Striga asiatica HOM05D004464 ORTHO05D005135 1.1e-44 183.3 158 60.1
Dinv33871 Davidia involucrata HOM05D004464 ORTHO05D005135 1.5e-44 183.0 158 60.1
Actinidia26272 Actinidia chinensis HOM05D004464 ORTHO05D005135 1.9e-44 182.6 158 58.9
Cc07_g04530 Coffea canephora HOM05D004464 ORTHO05D005135 3.2e-44 181.8 158 59.5
Solyc02g089280.3 Solanum lycopersicum HOM05D004464 ORTHO05D005135 3.2e-44 181.8 158 58.9
VMungo0720G0545 Vigna mungo HOM05D004464 ORTHO05D005135 3.2e-44 181.8 158 60.8
Migut.K00882 Erythranthe guttata HOM05D004464 ORTHO05D005135 4.2e-44 181.4 158 58.2
SalBow1G0807 Salvia bowleyana HOM05D004464 ORTHO05D005135 4.2e-44 181.4 158 60.1
Sopen02g034060 Solanum pennellii HOM05D004464 ORTHO05D005135 5.5e-44 181.0 158 58.9
Nitab4.5_0001339g0030 Nicotiana tabacum HOM05D004464 ORTHO05D005135 7.2e-44 180.6 158 58.2
Peaxi162Scf01039g00131 Petunia axillaris HOM05D004464 ORTHO05D005135 7.2e-44 180.6 158 59.5
Actinidia17608 Actinidia chinensis HOM05D004464 ORTHO05D005135 9.4e-44 180.3 158 58.2
MD17G1066400 Malus domestica HOM05D004464 ORTHO05D005135 9.4e-44 180.3 158 57.6
Medtr8g102530 Medicago truncatula HOM05D004464 ORTHO05D005135 9.4e-44 180.3 158 58.2
MD09G1075700 Malus domestica HOM05D004464 ORTHO05D005135 1.2e-43 179.9 158 57.0
Sabra17G0087000 Salix brachista HOM05D004464 ORTHO05D005135 1.2e-43 179.9 158 56.3
PGSC0003DMG400001469 Solanum tuberosum HOM05D004464 ORTHO05D005135 1.2e-43 179.9 158 58.2
CANSAT11G0238 Cannabis sativa HOM05D004464 ORTHO05D005135 1.6e-43 179.5 158 58.9
Nn4g23543 Nelumbo nucifera HOM05D004464 ORTHO05D005135 1.6e-43 179.5 158 57.6
MBI15_g04989_MAGBIO Magnolia biondii HOM05D004464 ORTHO05D005135 2.1e-43 179.1 158 57.6
MBI15_g11301_MAGBIO Magnolia biondii HOM05D004464 ORTHO05D005135 2.1e-43 179.1 158 57.6
Potri.017G101200 Populus trichocarpa HOM05D004464 ORTHO05D005135 2.1e-43 179.1 158 57.0
Sc07g0002150 Simmondsia chinensis HOM05D004464 ORTHO05D005135 2.1e-43 179.1 158 58.9
TPR.G29907 Trifolium pratense HOM05D004464 ORTHO05D005135 2.1e-43 179.1 158 58.2
Dinv34904 Davidia involucrata HOM05D004464 ORTHO05D005135 2.7e-43 178.7 158 58.9
Hund16239 Selenicereus undatus HOM05D004464 ORTHO05D005135 2.7e-43 178.7 158 57.0
CANSAT64G2552 Cannabis sativa HOM05D004464 ORTHO05D005135 4.7e-43 177.9 158 57.6
DCAR_016093 Daucus carota HOM05D004464 ORTHO05D005135 4.7e-43 177.9 158 56.3
TWI36G0525 Tripterygium wilfordii HOM05D004464 ORTHO05D005135 6.1e-43 177.6 158 55.1
TWI36G0787 Tripterygium wilfordii HOM05D004464 ORTHO05D005135 6.1e-43 177.6 158 55.1
TWI75G1858 Tripterygium wilfordii HOM05D004464 ORTHO05D005135 6.1e-43 177.6 158 55.1
CAN.G497.54 Capsicum annuum HOM05D004464 ORTHO05D005135 8.0e-43 177.2 158 57.0
Sabra10G0012000 Salix brachista HOM05D004464 ORTHO05D005135 8.0e-43 177.2 165 53.9
Psat7g017000 Pisum sativum HOM05D004464 ORTHO05D005135 1.0e-42 176.8 158 58.9
TPR.G23462 Trifolium pratense HOM05D004464 ORTHO05D005135 1.0e-42 176.8 158 58.2
Hma1.2p1_1837F.1_g304810 Hydrangea macrophylla HOM05D004464 ORTHO05D005135 2.3e-42 175.6 158 57.6
Ah.16g101000 Amaranthus hybridus HOM05D004464 ORTHO05D005135 4.0e-42 174.9 158 56.3
arahy.Tifrunner.gnm1.ann1.6V5APJ Arachis hypogaea HOM05D004464 ORTHO05D005135 4.0e-42 174.9 158 57.0
arahy.Tifrunner.gnm1.ann1.AQQ1ZC Arachis hypogaea HOM05D004464 ORTHO05D005135 4.0e-42 174.9 158 57.0
Potri.004G113600 Populus trichocarpa HOM05D004464 ORTHO05D005135 5.2e-42 174.5 158 54.4
Haze_14377 Corylus avellana HOM05D004464 ORTHO05D005135 6.8e-42 174.1 140 60.7
EL10Ac2g04433 Beta vulgaris HOM05D004464 ORTHO05D005135 8.8e-42 173.7 158 55.7
AUR62009474 Chenopodium quinoa HOM05D004464 ORTHO05D005135 1.2e-41 173.3 158 57.0
ATR0743G033 Amborella trichopoda HOM05D004464 ORTHO05D005135 2.0e-41 172.6 158 56.3
CiPaw.15G080600 Carya illinoinensis HOM05D004464 ORTHO05D005135 2.0e-41 172.6 161 54.7
ClCG07G016070 Citrullus lanatus HOM05D004464 ORTHO05D005135 2.0e-41 172.6 158 56.3
PSO198G0095 Papaver somniferum HOM05D004464 ORTHO05D005135 2.6e-41 172.2 158 55.1
QL02p065152 Quercus lobata HOM05D004464 ORTHO05D005135 3.4e-41 171.8 161 54.7
QL09p044371 Quercus lobata HOM05D004464 ORTHO05D005135 3.4e-41 171.8 161 53.4
FvH4_6g46310 Fragaria vesca HOM05D004464 ORTHO05D005135 4.4e-41 171.4 158 55.1
FAN02G0274 Fragaria x ananassa HOM05D004464 ORTHO05D005135 4.4e-41 171.4 158 55.1
FAN09G0031 Fragaria x ananassa HOM05D004464 ORTHO05D005135 4.4e-41 171.4 158 55.1
FAN14G2017 Fragaria x ananassa HOM05D004464 ORTHO05D005135 4.4e-41 171.4 158 55.1
PSO782G4050 Papaver somniferum HOM05D004464 ORTHO05D005135 4.4e-41 171.4 158 55.1
AUR62023152 Chenopodium quinoa HOM05D004464 ORTHO05D005135 5.7e-41 171.0 158 56.3
CsaV3_4G010040 Cucumis sativus L. HOM05D004464 ORTHO05D005135 9.8e-41 170.2 158 55.7
FAN05G3637 Fragaria x ananassa HOM05D004464 ORTHO05D005135 1.7e-40 169.5 158 54.4
Ca_17363_v3 Cicer arietinum L. HOM05D002451 ORTHO05D007901 2.2e-40 169.1 145 60.7
Lalb_Chr16g0389591 Lupinus albus HOM05D004464 ORTHO05D005135 2.2e-40 169.1 158 55.7
RcHm_v2.0_Chr2g0164761 Rosa chinensis HOM05D004464 ORTHO05D005135 2.2e-40 169.1 158 55.1
PSO478G4867 Papaver somniferum HOM05D004464 ORTHO05D005135 2.8e-40 168.7 133 60.9
CSS0016516 Camellia sinensis var. sinensis HOM05D004464 ORTHO05D005135 6.3e-40 167.5 158 54.4
CSS0037173 Camellia sinensis var. sinensis HOM05D004464 ORTHO05D005135 6.3e-40 167.5 158 54.4
CiPaw.06G059900 Carya illinoinensis HOM05D004464 ORTHO05D005135 6.3e-40 167.5 161 52.8
vmacro18124 Vaccinium macrocarpon HOM05D004464 ORTHO05D005135 1.4e-39 166.4 156 54.5
Cfa007699 Carpinus fangiana HOM05D004464 ORTHO05D005135 4.1e-39 164.9 161 52.8
ECA285G0012 Erigeron canadensis HOM05D004464 ORTHO05D005135 4.1e-39 164.9 162 53.1
HPP92_025702 Vanilla planifolia HOM05D004464 ORTHO05D005135 4.1e-39 164.9 150 57.3
PSO017G3712 Papaver somniferum HOM05D004464 ORTHO05D005135 5.4e-39 164.5 158 53.8
Ah.10g038200 Amaranthus hybridus HOM05D004464 ORTHO05D005135 1.2e-38 163.3 158 53.2
Aqoxy3G02935 Aquilegia oxysepala HOM05D004464 ORTHO05D005135 1.2e-38 163.3 158 52.5
Sed0009719 Sechium edule HOM05D004464 ORTHO05D005135 2.0e-38 162.5 158 52.5
Oeu033412.2 Olea europaea HOM05D004464 ORTHO05D005135 2.7e-38 162.2 203 47.8
TAR629G1609 Trochodendron aralioides HOM05D004464 ORTHO05D005135 3.8e-37 158.3 145 55.9
SMO089G0012 Selaginella moellendorffii HOM05D004464 ORTHO05D005135 9.5e-36 153.7 158 50.6
DCAR_010215 Daucus carota HOM05D004464 ORTHO05D005135 3.6e-35 151.8 194 43.3
Thhalv10014794m.g Eutrema salsugineum HOM05D004464 ORTHO05D005135 4.7e-35 151.4 115 67.0
BolC1t00394H Brassica oleracea HOM05D004464 ORTHO05D005135 1.0e-34 150.2 94 80.9
Mapoly0007s0196 Marchantia polymorpha HOM05D004464 ORTHO05D005135 2.3e-34 149.1 158 48.1
SHI12226 Sapria himalayana HOM05D004464 ORTHO05D005135 2.0e-33 146.0 159 49.1
MCO12G368 Micromonas commoda HOM05D004464 ORTHO05D005135 9.8e-33 143.7 158 47.5
Pp3c13_7750 Physcomitrium patens HOM05D004464 ORTHO05D005135 1.3e-32 143.3 158 46.8
Atru.chr5.3325 Acer truncatum HOM05D004464 ORTHO05D005135 1.4e-31 139.8 141 51.1
BolC3t13358H Brassica oleracea HOM05D004464 ORTHO05D005135 1.4e-31 139.8 87 81.6
Nitab4.5_0009887g0020 Nicotiana tabacum HOM05D004464 ORTHO05D005135 2.4e-31 139.0 113 61.1
Lsat_1_v5_gn_3_96881 Lactuca sativa HOM05D004464 ORTHO05D005135 3.1e-31 138.7 126 59.5
SMO302G0020 Selaginella moellendorffii HOM05D004464 ORTHO05D005135 7.0e-31 137.5 151 49.7
Glyma.16G058000 Glycine max HOM05D004464 ORTHO05D005135 1.5e-28 129.8 122 56.6
Cre03.g170750 Chlamydomonas reinhardtii HOM05D004464 ORTHO05D005135 1.2e-27 126.7 158 43.7
SEGI_12415 Sequoiadendron giganteum HOM05D004464 ORTHO05D005135 9.8e-25 117.1 110 52.7
Nn3g17540 Nelumbo nucifera HOM05D004464 ORTHO05D005135 1.0e-21 107.1 133 43.6
Cfa025099 Carpinus fangiana HOM05D002539 ORTHO05D005135 1.9e-20 102.8 163 34.4
Lju361A7T16 Lonicera japonica HOM05D004464 ORTHO05D005135 4.7e-19 98.2 81 59.3
Cpa.g.sc14.239 Carica papaya HOM05D004464 ORTHO05D005135 2.3e-18 95.9 50 86.0
Gorai.007G357000 Gossypium raimondii HOM05D004464 ORTHO05D005135 3.1e-18 95.5 132 47.0
MELO3C000036.2 Cucumis melo HOM05D004464 ORTHO05D005135 6.8e-18 94.4 50 84.0
Gorai.007G356600 Gossypium raimondii HOM05D004464 ORTHO05D005135 1.2e-17 93.6 50 82.0
AagrBONN_evm.TU.Sc2ySwM_362.1773 Anthoceros agrestis HOM05D004464 ORTHO05D005135 1.5e-17 93.2 110 45.5
Oeu003765.1 Olea europaea HOM05D007961 ORTHO05D005135 2.0e-17 92.8 50 86.0
Gorai.007G357200 Gossypium raimondii HOM05D004464 ORTHO05D005135 4.4e-17 91.7 50 78.0
CBR_g26031 Chara braunii HOM05D004464 ORTHO05D005135 7.5e-17 90.9 132 41.7
Lju361C7T5 Lonicera japonica HOM05D004464 ORTHO05D005135 2.2e-16 89.4 50 74.0
Rhsim08G0077600 Rhododendron simsii HOM05D004464 ORTHO05D005135 2.2e-16 89.4 50 78.0
MELO3C001556.2 Cucumis melo HOM05D004464 ORTHO05D005135 7.0e-15 84.3 81 51.9
ECA246G0747 Erigeron canadensis HOM05D004464 ORTHO05D005135 1.2e-14 83.6 50 72.0
AagrBONN_evm.TU.Sc2ySwM_344.90 Anthoceros agrestis HOM05D004464 ORTHO05D005135 1.6e-14 83.2 134 38.1
BcaC04g18941 Brassica carinata HOM05D004464 ORTHO05D005135 1.6e-14 83.2 86 51.2
SHI12394 Sapria himalayana HOM05D004464 ORTHO05D005135 7.8e-14 80.9 81 53.1
SHI40216 Sapria himalayana HOM05D004464 ORTHO05D005135 2.1e-11 72.8 78 43.6
C09p61360 Brassica napus HOM05D004464 ORTHO05D005135 8.1e-11 70.9 109 42.2
AagrBONN_evm.TU.Sc2ySwM_368.3154 Anthoceros agrestis HOM05D004464 ORTHO05D005135 1.1e-10 70.5 50 62.0
BolC9t58977H Brassica oleracea HOM05D004464 ORTHO05D005135 2.3e-10 69.3 71 52.1
Thecc.01G298200 Theobroma cacao HOM05D004464 ORTHO05D005135 2.9e-08 62.4 37 70.3


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