Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g51477 Brassica carinata HOM05D000209 ORTHO05D000129 9.4e-65 250.0 121 100.0
C01p12800 Brassica napus HOM05D000209 ORTHO05D000129 3.4e-46 188.3 120 81.7
BolC1t01257H Brassica oleracea HOM05D000209 ORTHO05D000129 3.4e-46 188.3 120 81.7
A01p10830 Brassica napus HOM05D000209 ORTHO05D000129 2.8e-40 168.7 120 70.8
BraA01t01030Z Brassica rapa HOM05D000209 ORTHO05D000129 2.8e-40 168.7 120 70.8
A01p10820 Brassica napus HOM05D000209 ORTHO05D000129 4.9e-37 157.9 118 68.6
BraA01t01029Z Brassica rapa HOM05D000209 ORTHO05D000129 4.9e-37 157.9 118 68.6
BcaC09g51479 Brassica carinata HOM05D000209 ORTHO05D000129 1.8e-36 156.0 118 67.8
AL3G30320 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.9e-15 84.0 121 38.8
AL4G15010 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.7e-13 79.7 117 41.9
Carub.0003s1724 Capsella rubella HOM05D000209 ORTHO05D000129 2.2e-13 79.3 117 41.9
AL3G30310 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.9e-13 79.0 117 42.7
AL3G30600 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.9e-13 78.2 122 38.5
AT3G17540 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.9e-13 78.2 122 38.5
CARHR092860 Cardamine hirsuta HOM05D000209 ORTHO05D000129 8.3e-13 77.4 114 42.1
AT3G17265 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.1e-12 75.1 118 39.8
C05p48880 Brassica napus HOM05D000209 ORTHO05D000129 5.4e-12 74.7 122 41.0
BolC5t33630H Brassica oleracea HOM05D000209 ORTHO05D000129 5.4e-12 74.7 122 41.0
BcaC05g28779 Brassica carinata HOM05D000977 ORTHO05D001094 1.2e-11 73.6 122 41.0
AT2G24510 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.6e-11 73.2 122 38.5
A05p30170 Brassica napus HOM05D000209 ORTHO05D000129 1.6e-11 73.2 125 39.2
Carub.0004s0385 Capsella rubella HOM05D000209 ORTHO05D000129 2.1e-11 72.8 122 42.6
AT3G17570 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.7e-10 69.7 124 37.9
BraA05t21857Z Brassica rapa HOM05D000209 ORTHO05D000129 3.9e-10 68.6 125 38.4
Carub.0002s0273 Capsella rubella HOM05D000209 ORTHO05D000129 3.9e-10 68.6 127 34.6
AL3G30630 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.6e-10 67.8 129 36.4
Carub.0004s0386 Capsella rubella HOM05D000209 ORTHO05D000129 1.1e-09 67.0 120 37.5
Thhalv10000467m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.1e-09 67.0 104 42.3
Thhalv10020988m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.1e-09 67.0 119 38.7
AL3G34600 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.5e-09 66.6 119 42.0
BraA03t13176Z Brassica rapa HOM05D000209 ORTHO05D000129 1.5e-09 66.6 121 38.8
C06p45420 Brassica napus HOM05D000209 ORTHO05D000129 1.9e-09 66.2 121 38.8
Carub.0008s1030 Capsella rubella HOM05D000209 ORTHO05D000129 1.9e-09 66.2 118 36.4
Thhalv10003403m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.9e-09 66.2 118 34.7
A01p35620 Brassica napus HOM05D000209 ORTHO05D000129 2.5e-09 65.9 125 38.4
A03p40230 Brassica napus HOM05D000209 ORTHO05D000129 2.5e-09 65.9 122 38.5
BraA01t03643Z Brassica rapa HOM05D000209 ORTHO05D000129 2.5e-09 65.9 125 38.4
BcaNung01175 Brassica carinata HOM05D000209 ORTHO05D000129 3.3e-09 65.5 125 34.4
BraA01t03639Z Brassica rapa HOM05D000209 ORTHO05D000129 3.3e-09 65.5 125 37.6
AT3G17530 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.3e-09 65.1 122 34.4
C01p46970 Brassica napus HOM05D000209 ORTHO05D000129 4.3e-09 65.1 125 36.0
BolC1t04665H Brassica oleracea HOM05D000209 ORTHO05D000129 4.3e-09 65.1 125 36.0
Carub.0004s0434 Capsella rubella HOM05D000209 ORTHO05D000129 4.3e-09 65.1 118 36.4
Carub.0004s2140 Capsella rubella HOM05D000209 ORTHO05D000129 4.3e-09 65.1 117 35.0
AL3G34610 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.6e-09 64.7 120 38.3
AT3G17560 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 5.6e-09 64.7 122 37.7
BcaC08g46568 Brassica carinata HOM05D000209 ORTHO05D000129 5.6e-09 64.7 121 38.0
BolC6t39600H Brassica oleracea HOM05D000209 ORTHO05D000129 5.6e-09 64.7 121 38.0
Thhalv10002957m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 5.6e-09 64.7 119 37.8
BcaC09g48853 Brassica carinata HOM05D000209 ORTHO05D000129 7.3e-09 64.3 125 37.6
A01p37020 Brassica napus HOM05D000209 ORTHO05D000129 7.3e-09 64.3 125 36.8
A07p37650 Brassica napus HOM05D000209 ORTHO05D000129 7.3e-09 64.3 121 38.8
C01p45210 Brassica napus HOM05D000209 ORTHO05D000129 7.3e-09 64.3 125 37.6
BolC1t04495H Brassica oleracea HOM05D000209 ORTHO05D000129 7.3e-09 64.3 125 37.6
BraA01t03763Z Brassica rapa HOM05D000209 ORTHO05D000129 7.3e-09 64.3 125 36.8
Thhalv10022393m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 7.3e-09 64.3 120 35.8
AL4G35660 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 9.5e-09 63.9 124 35.5
A01p41660 Brassica napus HOM05D000209 ORTHO05D000129 9.5e-09 63.9 123 36.6
BcaB03g14893 Brassica carinata HOM05D000209 ORTHO05D000129 1.2e-08 63.5 121 38.0
BcaB06g29111 Brassica carinata HOM05D000209 ORTHO05D000129 1.2e-08 63.5 133 35.3
AL8G10750 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.6e-08 63.2 126 37.3
AL8G24290 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.6e-08 63.2 129 34.1
BcaB06g25840 Brassica carinata HOM05D000209 ORTHO05D000129 1.6e-08 63.2 127 37.8
BcaC06g35672 Brassica carinata HOM05D000209 ORTHO05D000129 1.6e-08 63.2 123 38.2
A07p08080 Brassica napus HOM05D000209 ORTHO05D000129 1.6e-08 63.2 123 38.2
C07p12230 Brassica napus HOM05D000209 ORTHO05D000129 1.6e-08 63.2 123 38.2
CARHR151680 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.6e-08 63.2 118 33.9
Thhalv10022250m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.6e-08 63.2 116 36.2
Sp3g15690 Schrenkiella parvula HOM05D000209 ORTHO05D000129 1.6e-08 63.2 124 35.5
BcaB04g20703 Brassica carinata HOM05D000209 ORTHO05D000129 2.1e-08 62.8 98 40.8
BcaC09g48690 Brassica carinata HOM05D000209 ORTHO05D000129 2.1e-08 62.8 125 36.0
C01p46900 Brassica napus HOM05D000209 ORTHO05D000129 2.1e-08 62.8 125 36.0
Carub.0003s1727 Capsella rubella HOM05D000209 ORTHO05D000129 2.1e-08 62.8 124 34.7
Carub.0006s2841 Capsella rubella HOM05D000209 ORTHO05D000129 2.8e-08 62.4 116 37.1
AL8G23220 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.6e-08 62.0 114 36.8
AT3G20690 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 3.6e-08 62.0 122 38.5
BraA01t04240Z Brassica rapa HOM05D000209 ORTHO05D000129 3.6e-08 62.0 119 37.0
Carub.0003s2103 Capsella rubella HOM05D000209 ORTHO05D000129 4.7e-08 61.6 122 36.1
AL3G22030 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 6.2e-08 61.2 124 34.7
AT3G25460 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 6.2e-08 61.2 118 36.4
AT4G09870 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 6.2e-08 61.2 124 33.1
Thhalv10002795m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 6.2e-08 61.2 119 36.1
AL2G13920 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.1e-08 60.8 129 34.9
AL4G22690 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.1e-08 60.8 125 36.8
A01p37040 Brassica napus HOM05D000209 ORTHO05D000129 8.1e-08 60.8 125 33.6
A05p18310 Brassica napus HOM05D000209 ORTHO05D000129 8.1e-08 60.8 122 32.0
BraA01t03765Z Brassica rapa HOM05D000209 ORTHO05D000129 8.1e-08 60.8 125 33.6
BraA05t20724Z Brassica rapa HOM05D000209 ORTHO05D000129 8.1e-08 60.8 122 32.0
Sp4g04370 Schrenkiella parvula HOM05D000209 ORTHO05D000129 1.1e-07 60.5 134 37.3
AL4G22640 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.4e-07 60.1 133 36.8
AL4G36700 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.4e-07 60.1 98 38.8
AT1G62270 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.4e-07 60.1 135 32.6
BcaB04g20849 Brassica carinata HOM05D000209 ORTHO05D000129 1.8e-07 59.7 126 34.1
THA.LOC104820267 Tarenaya hassleriana HOM05D000209 ORTHO05D000129 1.8e-07 59.7 121 33.9
AT5G47300 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.3e-07 59.3 125 36.0
BraA07t28593Z Brassica rapa HOM05D000209 ORTHO05D000129 2.3e-07 59.3 123 37.4
AL3G41320 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 4.0e-07 58.5 127 35.4
BolC1t04790H Brassica oleracea HOM05D000209 ORTHO05D000129 4.0e-07 58.5 143 37.8
BraA03t13437Z Brassica rapa HOM05D000209 ORTHO05D000129 4.0e-07 58.5 115 34.8
AL3G37010 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.2e-07 58.2 115 35.7
AL769U10010 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 5.2e-07 58.2 136 35.3
BcaC01g00572 Brassica carinata HOM05D000209 ORTHO05D000129 6.8e-07 57.8 93 41.9
BcaC05g28447 Brassica carinata HOM05D000209 ORTHO05D000129 6.8e-07 57.8 139 33.1
BcaC09g48651 Brassica carinata HOM05D000209 ORTHO05D000129 6.8e-07 57.8 131 35.1
C03p81480 Brassica napus HOM05D000209 ORTHO05D000129 6.8e-07 57.8 93 41.9
C05p45310 Brassica napus HOM05D000209 ORTHO05D000129 6.8e-07 57.8 139 33.1
BolC3t20419H Brassica oleracea HOM05D000209 ORTHO05D000129 6.8e-07 57.8 93 41.9
Carub.0002s0302 Capsella rubella HOM05D000209 ORTHO05D000129 6.8e-07 57.8 129 32.6
THA.LOC104820433 Tarenaya hassleriana HOM05D000209 ORTHO05D000129 6.8e-07 57.8 123 30.9
BcaC01g01386 Brassica carinata HOM05D000209 ORTHO05D000129 8.9e-07 57.4 120 33.3
BcaC09g48375 Brassica carinata HOM05D000209 ORTHO05D000129 8.9e-07 57.4 138 35.5
BcaC09g48713 Brassica carinata HOM05D000209 ORTHO05D000129 8.9e-07 57.4 121 35.5
BcaC09g48899 Brassica carinata HOM05D000209 ORTHO05D000129 8.9e-07 57.4 120 37.5
C01p44650 Brassica napus HOM05D000209 ORTHO05D000129 8.9e-07 57.4 120 37.5
C01p50760 Brassica napus HOM05D000209 ORTHO05D000129 8.9e-07 57.4 138 35.5
C03p91460 Brassica napus HOM05D000209 ORTHO05D000129 8.9e-07 57.4 120 33.3
BolC1t04433H Brassica oleracea HOM05D000209 ORTHO05D000129 8.9e-07 57.4 120 37.5
BolC1t05025H Brassica oleracea HOM05D000209 ORTHO05D000129 8.9e-07 57.4 138 35.5
BolC3t21464H Brassica oleracea HOM05D000209 ORTHO05D000129 8.9e-07 57.4 120 33.3
Carub.0004s0838 Capsella rubella HOM05D000209 ORTHO05D000129 8.9e-07 57.4 127 33.9
Thhalv10002977m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 8.9e-07 57.4 120 35.0
AL3G34630 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.2e-06 57.0 119 41.2
AL3G49640 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.2e-06 57.0 117 33.3
BcaB06g26016 Brassica carinata HOM05D000209 ORTHO05D000129 1.2e-06 57.0 127 33.1
C03p52680 Brassica napus HOM05D000209 ORTHO05D000129 1.2e-06 57.0 115 34.8
BolC3t17536H Brassica oleracea HOM05D000209 ORTHO05D000129 1.2e-06 57.0 115 34.8
BraA08t32214Z Brassica rapa HOM05D000209 ORTHO05D000129 1.2e-06 57.0 120 33.3
Carub.0002s0522 Capsella rubella HOM05D000209 ORTHO05D000129 1.2e-06 57.0 126 35.7
Sp3g17310 Schrenkiella parvula HOM05D000209 ORTHO05D000129 1.2e-06 57.0 121 36.4
AL3G30330 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 1.5e-06 56.6 128 33.6
AT3G13830 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.5e-06 56.6 145 32.4
BcaB06g25681 Brassica carinata HOM05D000209 ORTHO05D000129 1.5e-06 56.6 121 38.0
A01p36780 Brassica napus HOM05D000209 ORTHO05D000129 1.5e-06 56.6 121 35.5
BolC1t04662H Brassica oleracea HOM05D000209 ORTHO05D000129 1.5e-06 56.6 110 37.3
BolC5t33255H Brassica oleracea HOM05D000209 ORTHO05D000129 1.5e-06 56.6 139 32.4
BraA01t03739Z Brassica rapa HOM05D000209 ORTHO05D000129 1.5e-06 56.6 121 35.5
BraA01t04017Z Brassica rapa HOM05D000209 ORTHO05D000129 1.5e-06 56.6 135 36.3
Carub.0004s0861 Capsella rubella HOM05D000209 ORTHO05D000129 1.5e-06 56.6 125 32.8
CARHR248580 Cardamine hirsuta HOM05D000209 ORTHO05D000129 1.5e-06 56.6 119 35.3
AT2G27520 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.0e-06 56.2 125 31.2
AT5G41490 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.0e-06 56.2 133 33.8
BcaC08g43521 Brassica carinata HOM05D000209 ORTHO05D000129 2.0e-06 56.2 80 42.5
C06p09120 Brassica napus HOM05D000209 ORTHO05D000129 2.0e-06 56.2 80 42.5
AL2G18650 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.6e-06 55.8 124 35.5
AL3G30180 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 2.6e-06 55.8 119 35.3
BcaC01g03428 Brassica carinata HOM05D000209 ORTHO05D000129 2.6e-06 55.8 115 33.9
A03p42930 Brassica napus HOM05D000209 ORTHO05D000129 2.6e-06 55.8 115 33.9
A08p01610 Brassica napus HOM05D000209 ORTHO05D000129 2.6e-06 55.8 120 32.5
CARHR134370 Cardamine hirsuta HOM05D000209 ORTHO05D000129 2.6e-06 55.8 139 34.5
Thhalv10000638m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.6e-06 55.8 106 34.0
Thhalv10027561m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 2.6e-06 55.8 123 34.1
AL1G34620 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 3.4e-06 55.5 116 28.4
C03p48930 Brassica napus HOM05D000209 ORTHO05D000129 3.4e-06 55.5 85 40.0
Carub.0001s2538 Capsella rubella HOM05D000209 ORTHO05D000129 3.4e-06 55.5 136 32.4
Carub.0004s0435 Capsella rubella HOM05D000209 ORTHO05D000129 3.4e-06 55.5 117 33.3
Carub.0004s0830 Capsella rubella HOM05D000209 ORTHO05D000129 3.4e-06 55.5 121 36.4
CARHR088870 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.4e-06 55.5 126 34.1
Thhalv10000550m.g Eutrema salsugineum HOM05D000209 ORTHO05D020214 3.4e-06 55.5 83 44.6
Carub.0003s2067 Capsella rubella HOM05D000209 ORTHO05D000129 4.4e-06 55.1 127 35.4
CARHR047290 Cardamine hirsuta HOM05D000209 ORTHO05D000129 4.4e-06 55.1 91 41.8
Carub.0003s1761 Capsella rubella HOM05D000209 ORTHO05D000129 5.8e-06 54.7 138 34.8
Carub.0004s0845 Capsella rubella HOM05D000209 ORTHO05D000129 5.8e-06 54.7 95 35.8
Thhalv10002981m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 5.8e-06 54.7 117 32.5
Thhalv10002999m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 5.8e-06 54.7 127 34.6
BcaB04g20637 Brassica carinata HOM05D000209 ORTHO05D000129 7.6e-06 54.3 122 34.4
BcaC09g51845 Brassica carinata HOM05D000209 ORTHO05D000129 7.6e-06 54.3 119 34.5
C01p08400 Brassica napus HOM05D000209 ORTHO05D000129 7.6e-06 54.3 119 34.5
BolC1t00823H Brassica oleracea HOM05D000209 ORTHO05D000129 7.6e-06 54.3 119 34.5
Carub.0002s0781 Capsella rubella HOM05D000209 ORTHO05D000129 7.6e-06 54.3 128 34.4
CARHR099660 Cardamine hirsuta HOM05D000209 ORTHO05D000129 7.6e-06 54.3 118 32.2
Thhalv10021950m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 7.6e-06 54.3 119 37.0
BraA04t15998Z Brassica rapa HOM05D000209 ORTHO05D000129 9.9e-06 53.9 103 38.8


User provided reference genes

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