Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g49260 Brassica carinata HOM05D023307 ORTHO05D015251 9.0e-66 253.4 128 100.0
C01p40770 Brassica napus HOM05D023307 ORTHO05D015251 4.8e-51 204.5 103 100.0
A01p31880 Brassica napus HOM05D023307 ORTHO05D015251 4.1e-50 201.4 103 98.1
CARHR099140 Cardamine hirsuta HOM05D001652 ORTHO05D015251 3.3e-20 102.1 106 57.5
Thhalv10022215m.g Eutrema salsugineum HOM05D001652 ORTHO05D015251 2.4e-18 95.9 105 54.3
THA.LOC104808615 Tarenaya hassleriana HOM05D001652 ORTHO05D015251 7.0e-18 94.4 118 49.2
AT3G23190 Arabidopsis thaliana HOM05D001652 ORTHO05D015251 2.0e-17 92.8 105 52.4
Aa31LG8G9690 Aethionema arabicum HOM05D001652 ORTHO05D015251 1.5e-15 86.7 106 48.1
Carub.0003s2342 Capsella rubella HOM05D001652 ORTHO05D015251 5.5e-15 84.7 119 47.9
AL3G37820 Arabidopsis lyrata HOM05D001652 ORTHO05D015251 4.0e-13 78.6 105 49.5
BraA01t03314Z Brassica rapa HOM05D023307 ORTHO05D015251 5.2e-13 78.2 39 100.0
BolC1t04035H Brassica oleracea HOM05D023307 ORTHO05D015251 2.6e-12 75.9 55 72.7
THA.LOC104808614 Tarenaya hassleriana HOM05D001652 ORTHO05D012030 1.9e-07 59.7 98 32.7
Dinv44663 Davidia involucrata HOM05D001652 ORTHO05D001768 5.5e-07 58.2 106 31.1
Ciclev10006114m.g Citrus clementina HOM05D001652 ORTHO05D001768 7.2e-07 57.8 123 32.5
Aqoxy5G00259 Aquilegia oxysepala HOM05D001652 ORTHO05D001768 9.4e-07 57.4 107 34.6
Rhsim02G0035500 Rhododendron simsii HOM05D001652 ORTHO05D001768 9.4e-07 57.4 107 32.7
Hma1.2p1_1716F.1_g299100 Hydrangea macrophylla HOM05D001652 ORTHO05D001768 1.2e-06 57.0 113 31.9
Hma1.2p1_1716F.1_g299106 Hydrangea macrophylla HOM05D001652 ORTHO05D001768 1.2e-06 57.0 113 31.9
Actinidia40076 Actinidia chinensis HOM05D001652 ORTHO05D001768 1.6e-06 56.6 106 33.0
TAR365G1118 Trochodendron aralioides HOM05D001652 ORTHO05D001768 2.1e-06 56.2 106 32.1
TWI53G0588 Tripterygium wilfordii HOM05D001652 ORTHO05D001768 2.7e-06 55.8 130 32.3
CSS0046283 Camellia sinensis var. sinensis HOM05D001652 ORTHO05D001768 4.7e-06 55.1 106 33.0
Aa31LG8G9660 Aethionema arabicum HOM05D001652 ORTHO05D001768 6.1e-06 54.7 93 36.6
CSS0020553 Camellia sinensis var. sinensis HOM05D001652 ORTHO05D001768 6.1e-06 54.7 106 32.1
CiPaw.01G187900 Carya illinoinensis HOM05D001652 ORTHO05D001768 6.1e-06 54.7 123 30.1
RcHm_v2.0_Chr4g0391911 Rosa chinensis HOM05D001652 ORTHO05D001768 6.1e-06 54.7 108 29.6
Aqoxy2G03619 Aquilegia oxysepala HOM05D001652 ORTHO05D001768 8.0e-06 54.3 128 27.3
BcaC04g21910 Brassica carinata HOM05D001652 ORTHO05D001768 8.0e-06 54.3 108 32.4
C09p25900 Brassica napus HOM05D001652 ORTHO05D001768 8.0e-06 54.3 108 32.4
Ciclev10006115m.g Citrus clementina HOM05D001652 ORTHO05D001768 8.0e-06 54.3 106 31.1
SGA_v2.0_scaffold88G27267 Striga asiatica HOM05D001652 ORTHO05D001768 8.0e-06 54.3 108 36.1


User provided reference genes

Program Settings