Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC09g48967 Brassica carinata HOM05D001498 ORTHO05D011506 3.5e-56 221.5 118 100.0
C01p44920 Brassica napus HOM05D001498 ORTHO05D011506 1.5e-54 216.1 117 97.4
BcaC07g38657 Brassica carinata HOM05D001498 ORTHO05D011506 4.3e-54 214.5 117 97.4
C09p16580 Brassica napus HOM05D001498 ORTHO05D011506 4.3e-54 214.5 117 97.4
BolC8t49067H Brassica oleracea HOM05D001498 ORTHO05D011506 4.3e-54 214.5 117 97.4
C01p38680 Brassica napus HOM05D001498 ORTHO05D011506 2.1e-53 212.2 117 94.9
BolC1t03827H Brassica oleracea HOM05D001498 ORTHO05D011506 2.1e-53 212.2 117 94.9
BolC1t02817H Brassica oleracea HOM05D001498 ORTHO05D106172 4.7e-53 211.1 117 94.9
C04p21380 Brassica napus HOM05D001498 ORTHO05D013028 1.4e-52 209.5 117 94.9
C08p17880 Brassica napus HOM05D001498 ORTHO05D001885 1.4e-52 209.5 117 94.9
BolC9t54653H Brassica oleracea HOM05D001498 ORTHO05D011506 1.4e-52 209.5 117 94.9
BolC3t19484H Brassica oleracea HOM05D001498 ORTHO05D011506 2.3e-52 208.8 117 94.0
BolC8t47367H Brassica oleracea HOM05D001498 ORTHO05D011506 3.1e-52 208.4 117 94.0
C02p53500 Brassica napus HOM05D001498 ORTHO05D001885 4.0e-52 208.0 117 94.9
C09p17600 Brassica napus HOM05D001498 ORTHO05D011506 6.8e-52 207.2 117 94.0
C07p49110 Brassica napus HOM05D001498 ORTHO05D097837 1.5e-51 206.1 116 94.0
C02p52020 Brassica napus HOM05D001498 ORTHO05D011506 2.0e-51 205.7 117 93.2
BolC2t11288H Brassica oleracea HOM05D001498 ORTHO05D011506 2.0e-51 205.7 117 93.2
BcaC08g44373 Brassica carinata HOM05D001498 ORTHO05D011506 3.4e-51 204.9 117 92.3
C04p36710 Brassica napus HOM05D001498 ORTHO05D001885 3.4e-51 204.9 117 93.2
BolC3t17911H Brassica oleracea HOM05D001498 ORTHO05D008559 2.9e-50 201.8 117 91.5
C01p30520 Brassica napus HOM05D001498 ORTHO05D001885 8.3e-50 200.3 108 96.3
C03p56230 Brassica napus HOM05D001498 ORTHO05D001885 8.3e-50 200.3 117 89.7
BcaC02g09114 Brassica carinata HOM05D001498 ORTHO05D011506 1.1e-49 199.9 117 91.5
BraA08t32774Z Brassica rapa HOM05D001498 ORTHO05D001885 2.4e-49 198.7 117 91.5
A08p07550 Brassica napus HOM05D001498 ORTHO05D011506 7.0e-49 197.2 117 90.6
C06p31050 Brassica napus HOM05D001498 ORTHO05D011506 1.0e-47 193.4 108 94.4
C03p66370 Brassica napus HOM05D001498 ORTHO05D011506 1.7e-47 192.6 109 93.6
C09p27470 Brassica napus HOM05D001498 ORTHO05D011506 8.6e-47 190.3 109 91.7
BcaC04g20364 Brassica carinata HOM05D001498 ORTHO05D011506 2.8e-45 185.3 100 98.0
A08p09540 Brassica napus HOM05D001498 ORTHO05D011506 4.7e-45 184.5 117 84.6
A08p06060 Brassica napus HOM05D001498 ORTHO05D011506 1.8e-44 182.6 117 83.8
BcaC05g27519 Brassica carinata HOM05D001498 ORTHO05D011506 4.4e-43 177.9 117 82.9
A03p54380 Brassica napus HOM05D001498 ORTHO05D011506 4.4e-43 177.9 117 82.1
BcaC02g10287 Brassica carinata HOM05D001498 ORTHO05D093229 1.3e-42 176.4 118 82.2
BraA03t15290Z Brassica rapa HOM05D001498 ORTHO05D011506 1.3e-42 176.4 117 80.3
C01p30560 Brassica napus HOM05D001498 ORTHO05D011506 3.7e-42 174.9 117 84.6
C01p48970 Brassica napus HOM05D001498 ORTHO05D011506 1.1e-41 173.3 117 83.8
C03p66000 Brassica napus HOM05D001498 ORTHO05D001885 3.2e-41 171.8 117 82.1
BcaC05g25872 Brassica carinata HOM05D001498 ORTHO05D011506 1.2e-40 169.9 117 81.2
C09p21170 Brassica napus HOM05D001498 ORTHO05D011506 1.6e-40 169.5 116 81.9
BolC9t55019H Brassica oleracea HOM05D001498 ORTHO05D011506 1.6e-40 169.5 116 81.9
BcaC01g03078 Brassica carinata HOM05D001498 ORTHO05D008559 3.0e-39 165.2 109 83.5
BcaC02g09776 Brassica carinata HOM05D001498 ORTHO05D016036 1.1e-38 163.3 95 91.6
BcaB07g32352 Brassica carinata HOM05D001498 ORTHO05D021639 5.6e-38 161.0 116 76.7
BcaB08g35076 Brassica carinata HOM05D001498 ORTHO05D021639 9.5e-38 160.2 118 76.3
BcaB06g25739 Brassica carinata HOM05D001498 ORTHO05D093323 1.6e-37 159.5 116 75.9
BcaB03g15933 Brassica carinata HOM05D001498 ORTHO05D021639 4.7e-37 157.9 116 75.0
BcaB04g18432 Brassica carinata HOM05D001498 ORTHO05D090882 4.7e-37 157.9 116 75.9
BcaB08g35461 Brassica carinata HOM05D001498 ORTHO05D090491 2.9e-34 148.7 116 72.4
BcaB05g23077 Brassica carinata HOM05D001498 ORTHO05D091436 2.7e-32 142.1 115 68.7
BcaB01g03187 Brassica carinata HOM05D001498 ORTHO05D090608 4.6e-32 141.4 101 74.3
BcaC06g36688 Brassica carinata HOM05D001498 ORTHO05D001885 1.3e-31 139.8 80 91.2
BcaB04g17678 Brassica carinata HOM05D001498 ORTHO05D094760 2.3e-31 139.0 101 73.3
BcaB07g33085 Brassica carinata HOM05D001498 ORTHO05D095625 2.3e-31 139.0 118 66.1
BcaB06g26755 Brassica carinata HOM05D001498 ORTHO05D092466 3.0e-31 138.7 94 78.7
BcaB07g33315 Brassica carinata HOM05D001498 ORTHO05D091495 1.9e-30 136.0 101 72.3
BcaB08g35016 Brassica carinata HOM05D001498 ORTHO05D092631 3.3e-30 135.2 115 65.2
BcaB06g25736 Brassica carinata HOM05D001498 ORTHO05D021639 2.1e-29 132.5 85 82.4
BcaB06g26473 Brassica carinata HOM05D001498 ORTHO05D091656 2.1e-29 132.5 101 74.3
BcaC04g19551 Brassica carinata HOM05D001498 ORTHO05D090991 4.7e-29 131.3 117 71.8
BcaB06g26483 Brassica carinata HOM05D001498 ORTHO05D095599 1.1e-28 130.2 101 69.3
BcaB03g16423 Brassica carinata HOM05D001498 ORTHO05D091575 3.4e-27 125.2 106 70.8
A01p28560 Brassica napus HOM05D001498 ORTHO05D021639 5.8e-27 124.4 70 91.4
BcaC08g44056 Brassica carinata HOM05D001498 ORTHO05D091470 2.4e-25 119.0 96 71.9
BcaC03g14315 Brassica carinata HOM05D001498 ORTHO05D008559 5.4e-25 117.9 91 76.9
BcaB03g16152 Brassica carinata HOM05D001498 ORTHO05D093112 2.7e-24 115.5 104 66.3
BcaB03g16497 Brassica carinata HOM05D001498 ORTHO05D008559 6.6e-23 110.9 89 73.0
BcaB04g17703 Brassica carinata HOM05D001498 ORTHO05D021639 8.7e-23 110.5 85 71.8
BcaB01g01484 Brassica carinata HOM05D001498 ORTHO05D091615 1.5e-22 109.8 119 58.0
BcaB05g22943 Brassica carinata HOM05D001498 ORTHO05D096110 4.3e-22 108.2 74 75.7
BcaB05g23120 Brassica carinata HOM05D001498 ORTHO05D090647 4.3e-22 108.2 104 62.5
BcaB07g32913 Brassica carinata HOM05D001498 ORTHO05D091922 9.6e-22 107.1 112 61.6
BcaB04g18314 Brassica carinata HOM05D001498 ORTHO05D095953 1.3e-21 106.7 91 67.0
BcaB01g01309 Brassica carinata HOM05D001498 ORTHO05D091216 2.8e-21 105.5 74 73.0
BcaC09g50109 Brassica carinata HOM05D001498 ORTHO05D093510 3.6e-21 105.1 94 67.0
BcaB05g23246 Brassica carinata HOM05D001498 ORTHO05D090900 4.8e-21 104.8 73 75.3
BcaC04g22591 Brassica carinata HOM05D001498 ORTHO05D095898 4.8e-21 104.8 66 84.8
BcaB03g16194 Brassica carinata HOM05D001498 ORTHO05D091006 6.2e-21 104.4 94 71.3
BcaB04g17776 Brassica carinata HOM05D001498 ORTHO05D092868 6.2e-21 104.4 128 53.1
BcaB03g16298 Brassica carinata HOM05D001498 ORTHO05D095831 1.4e-20 103.2 103 63.1
BcaB07g32989 Brassica carinata HOM05D001498 ORTHO05D008559 3.1e-20 102.1 120 55.8
BcaB06g27027 Brassica carinata HOM05D001498 ORTHO05D092574 4.0e-20 101.7 90 67.8
BcaC03g13777 Brassica carinata HOM05D001498 ORTHO05D091916 1.7e-18 96.3 79 72.2
BcaB06g26478 Brassica carinata HOM05D001498 ORTHO05D092859 4.9e-18 94.7 93 62.4
BcaB01g01816 Brassica carinata HOM05D001498 ORTHO05D091844 7.9e-16 87.4 102 56.9
BcaB07g33754 Brassica carinata HOM05D001498 ORTHO05D092729 3.9e-15 85.1 58 72.4
BolC5t31266H Brassica oleracea HOM05D001498 ORTHO05D019959 7.4e-14 80.9 119 46.2
BcaB07g33217 Brassica carinata HOM05D001498 ORTHO05D093085 2.1e-13 79.3 76 63.2
BcaB07g33220 Brassica carinata HOM05D001498 ORTHO05D096371 2.8e-13 79.0 94 54.3
BcaB07g33084 Brassica carinata HOM05D001498 ORTHO05D092207 4.8e-13 78.2 102 52.9
BcaB06g27273 Brassica carinata HOM05D001498 ORTHO05D094467 1.8e-12 76.3 93 55.9
BcaB05g23244 Brassica carinata HOM05D001498 ORTHO05D095601 2.4e-12 75.9 85 60.0
BcaB06g26727 Brassica carinata HOM05D001498 ORTHO05D093134 2.4e-12 75.9 100 53.0
BcaC09g51817 Brassica carinata HOM05D001498 ORTHO05D096326 4.0e-12 75.1 43 88.4
BcaC02g11926 Brassica carinata HOM05D001498 ORTHO05D019959 6.9e-12 74.3 100 45.0
C05p25290 Brassica napus HOM05D001498 ORTHO05D019959 7.6e-11 70.9 108 47.2
BcaB02g11279 Brassica carinata HOM05D001498 ORTHO05D095830 2.2e-10 69.3 84 51.2
BcaB02g11277 Brassica carinata HOM05D001498 ORTHO05D091891 4.9e-10 68.2 86 51.2
BcaC04g20544 Brassica carinata HOM05D001498 ORTHO05D016694 4.9e-10 68.2 60 58.3
BcaC06g35524 Brassica carinata HOM05D001498 ORTHO05D016694 4.9e-10 68.2 98 42.9
BcaC05g27663 Brassica carinata HOM05D001498 ORTHO05D090842 6.4e-10 67.8 63 55.6
BcaB06g27205 Brassica carinata HOM05D001498 ORTHO05D091204 8.4e-10 67.4 105 44.8
BcaC02g11068 Brassica carinata HOM05D001498 ORTHO05D016694 2.4e-09 65.9 98 43.9
BcaC06g36329 Brassica carinata HOM05D001498 ORTHO05D096194 2.4e-09 65.9 98 41.8
C07p38510 Brassica napus HOM05D001498 ORTHO05D100413 2.4e-09 65.9 36 88.9
C09p42290 Brassica napus HOM05D001498 ORTHO05D016694 2.4e-09 65.9 98 43.9
BolC4t23616H Brassica oleracea HOM05D001498 ORTHO05D016694 2.4e-09 65.9 98 43.9
BolC7t41038H Brassica oleracea HOM05D001498 ORTHO05D032253 3.2e-09 65.5 83 50.6
BcaB02g10765 Brassica carinata HOM05D001498 ORTHO05D095468 4.2e-09 65.1 98 43.9
BcaC04g20545 Brassica carinata HOM05D001498 ORTHO05D016694 4.2e-09 65.1 98 43.9
BolC9t57107H Brassica oleracea HOM05D001498 ORTHO05D016694 4.2e-09 65.1 98 43.9
C07p06210 Brassica napus HOM05D001498 ORTHO05D032253 5.5e-09 64.7 83 49.4
BcaC05g26789 Brassica carinata HOM05D001498 ORTHO05D094205 7.1e-09 64.3 73 58.9
C04p20860 Brassica napus HOM05D001498 ORTHO05D016694 1.2e-08 63.5 98 42.9
BcaB05g22880 Brassica carinata HOM05D001498 ORTHO05D019959 2.7e-08 62.4 85 45.9
BcaB01g01185 Brassica carinata HOM05D001498 ORTHO05D019959 1.0e-07 60.5 104 45.2
BcaC06g36230 Brassica carinata HOM05D001498 ORTHO05D032253 1.0e-07 60.5 77 50.6
BcaB07g33213 Brassica carinata HOM05D001498 ORTHO05D090837 1.3e-07 60.1 64 48.4
BcaB04g17490 Brassica carinata HOM05D001498 ORTHO05D019959 2.5e-06 55.8 72 45.8
BcaB02g11227 Brassica carinata HOM05D001498 ORTHO05D093168 4.3e-06 55.1 40 75.0


User provided reference genes

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