Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g37359 Brassica carinata HOM05D009089 ORTHO05D013779 4.0e-72 274.6 137 100.0
BolC8t47658H Brassica oleracea HOM05D009089 ORTHO05D013779 4.3e-58 228.0 181 69.6
BcaC01g02266 Brassica carinata HOM05D009089 ORTHO05D013779 2.4e-32 142.5 78 88.5
BcaC01g06699 Brassica carinata HOM05D009089 ORTHO05D013779 8.5e-30 134.0 81 82.7
BcaNung02880 Brassica carinata HOM05D009089 ORTHO05D013779 7.2e-29 131.0 81 81.5
BcaC04g20768 Brassica carinata HOM05D009089 ORTHO05D013779 1.2e-28 130.2 71 90.1
BcaC06g35651 Brassica carinata HOM05D009089 ORTHO05D013779 4.7e-28 128.3 81 81.5
BolC4t24273H Brassica oleracea HOM05D009089 ORTHO05D013779 3.0e-27 125.6 78 82.1
BcaC01g05270 Brassica carinata HOM05D009089 ORTHO05D092645 3.9e-27 125.2 116 61.2
BolC7t46148H Brassica oleracea HOM05D009089 ORTHO05D013779 7.4e-26 120.9 81 77.8
BcaC09g50455 Brassica carinata HOM05D009089 ORTHO05D095703 6.1e-20 101.3 57 91.2
BcaC09g50456 Brassica carinata HOM05D009089 ORTHO05D013779 6.1e-20 101.3 57 91.2
BcaB04g17813 Brassica carinata HOM05D009089 ORTHO05D013779 2.3e-19 99.4 103 51.5
BolC3t16007H Brassica oleracea HOM05D009089 ORTHO05D105711 4.0e-19 98.6 50 94.0
BcaC02g10566 Brassica carinata HOM05D009089 ORTHO05D013779 5.2e-19 98.2 51 92.2
BcaC02g10830 Brassica carinata HOM05D009089 ORTHO05D092561 5.2e-19 98.2 57 89.5
BcaC07g37524 Brassica carinata HOM05D009089 ORTHO05D093970 2.0e-18 96.3 52 88.5
BcaC03g17347 Brassica carinata HOM05D009089 ORTHO05D091279 5.7e-18 94.7 54 83.3
BcaC08g45638 Brassica carinata HOM05D009089 ORTHO05D013779 5.7e-18 94.7 51 90.2
BcaC04g20795 Brassica carinata HOM05D009089 ORTHO05D095814 7.5e-18 94.4 48 91.7
BcaC02g10731 Brassica carinata HOM05D009089 ORTHO05D013779 1.7e-17 93.2 51 88.2
BcaB01g01245 Brassica carinata HOM05D009089 ORTHO05D093534 1.8e-16 89.7 59 71.2
BcaB05g23797 Brassica carinata HOM05D009089 ORTHO05D095229 4.1e-16 88.6 80 58.8
BcaB06g26230 Brassica carinata HOM05D009089 ORTHO05D013779 1.3e-14 83.6 54 75.9
BcaB04g19104 Brassica carinata HOM05D009089 ORTHO05D013779 1.1e-13 80.5 54 74.1
BcaB02g06950 Brassica carinata HOM05D009089 ORTHO05D021666 1.8e-11 73.2 50 68.0
C04p24800 Brassica napus HOM05D000313 ORTHO05D027505 4.4e-10 68.6 56 64.3
BolC4t23984H Brassica oleracea HOM05D000313 ORTHO05D027505 4.4e-10 68.6 56 64.3
BcaB08g35413 Brassica carinata HOM05D009089 ORTHO05D093491 1.7e-09 66.6 49 67.3
BcaC05g27418 Brassica carinata HOM05D000313 ORTHO05D000065 6.3e-09 64.7 60 56.7
C05p33750 Brassica napus HOM05D000313 ORTHO05D041478 1.1e-08 63.9 70 54.3
BcaB04g19080 Brassica carinata HOM05D000313 ORTHO05D027505 1.8e-08 63.2 50 64.0
C07p05650 Brassica napus HOM05D000313 ORTHO05D000065 5.4e-08 61.6 60 56.7
BcaB04g18188 Brassica carinata HOM05D000313 ORTHO05D027505 7.0e-08 61.2 50 62.0
BolC5t32105H Brassica oleracea HOM05D000313 ORTHO05D041478 9.1e-08 60.8 70 52.9
BcaC04g20767 Brassica carinata HOM05D009089 ORTHO05D009795 4.5e-07 58.5 63 54.0
C06p05520 Brassica napus HOM05D000313 ORTHO05D000065 4.5e-07 58.5 60 56.7
BcaB01g05260 Brassica carinata HOM05D000313 ORTHO05D000065 7.7e-07 57.8 60 55.0
BcaC09g50908 Brassica carinata HOM05D000313 ORTHO05D000065 7.7e-07 57.8 60 55.0
C01p43800 Brassica napus HOM05D000313 ORTHO05D000065 7.7e-07 57.8 60 55.0
C03p10470 Brassica napus HOM05D000313 ORTHO05D000065 7.7e-07 57.8 60 55.0
BolC7t43562H Brassica oleracea HOM05D000313 ORTHO05D000065 7.7e-07 57.8 60 55.0
BcaC06g36049 Brassica carinata HOM05D009089 ORTHO05D091103 2.3e-06 56.2 49 49.0
BcaNung02333 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-06 56.2 60 53.3
BcaNung03865 Brassica carinata HOM05D000313 ORTHO05D000065 2.3e-06 56.2 60 53.3
BcaB08g36535 Brassica carinata HOM05D000313 ORTHO05D000065 6.6e-06 54.7 50 62.0
A02p31320 Brassica napus HOM05D000313 ORTHO05D000065 6.6e-06 54.7 59 52.5


User provided reference genes

Program Settings