Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g34903 Brassica carinata HOM05D030859 ORTHO05D000001 3.8e-96 354.8 172 100.0
BcaB08g34655 Brassica carinata HOM05D030859 ORTHO05D000001 4.3e-55 218.4 147 74.1
BcaC01g00635 Brassica carinata HOM05D030859 ORTHO05D000001 1.9e-50 203.0 139 71.2
BcaC09g48989 Brassica carinata HOM05D030859 ORTHO05D000001 2.4e-42 176.0 115 74.8
Aa31LG3G5060 Aethionema arabicum HOM05D000002 ORTHO05D000001 5.1e-24 115.2 162 41.4
Aa31LG1G6100 Aethionema arabicum HOM05D000002 ORTHO05D000001 3.1e-21 105.9 161 36.6
BolC6t35286H Brassica oleracea HOM05D000002 ORTHO05D000001 2.6e-20 102.8 124 39.5
C09p34990 Brassica napus HOM05D000002 ORTHO05D000001 5.9e-20 101.7 169 36.7
Hma1.2p1_0001F.1_g001500 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.4e-15 85.5 165 34.5
Rhsim02G0228300 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.7e-14 82.4 97 40.2
Eucgr.E01636 Eucalyptus grandis HOM05D000002 ORTHO05D000001 3.4e-12 75.9 114 36.0
TAR386G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 3.4e-12 75.9 104 34.6
COL.COLO4_14937 Corchorus olitorius HOM05D000002 ORTHO05D000001 5.9e-12 75.1 151 31.1
Oeu022190.1 Olea europaea HOM05D000002 ORTHO05D000001 5.9e-12 75.1 157 29.9
Oeu037102.1 Olea europaea HOM05D000002 ORTHO05D000001 7.7e-12 74.7 114 32.5
Oeu039050.1 Olea europaea HOM05D000002 ORTHO05D000001 1.7e-11 73.6 157 28.7
SHI11483 Sapria himalayana HOM05D014065 ORTHO05D000001 2.2e-11 73.2 144 31.2
Oeu019477.1 Olea europaea HOM05D000002 ORTHO05D000001 2.9e-11 72.8 157 30.6
Oeu053596.1 Olea europaea HOM05D000002 ORTHO05D000001 5.0e-11 72.0 157 31.2
HanXRQChr02g0040961 Helianthus annuus HOM05D000002 ORTHO05D000001 6.5e-11 71.6 122 32.0
Hma1.2p1_1611F.1_g293530 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.5e-11 71.6 104 36.5
HanXRQChr11g0320201 Helianthus annuus HOM05D000002 ORTHO05D000001 8.5e-11 71.2 155 31.0
COL.COLO4_23623 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.1e-10 70.9 108 31.5
ECA232G0091 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-10 70.1 122 31.1
HanXRQChr14g0429151 Helianthus annuus HOM05D000002 ORTHO05D000001 1.9e-10 70.1 163 31.9
HanXRQChr09g0254161 Helianthus annuus HOM05D000002 ORTHO05D000001 3.2e-10 69.3 158 29.1
Oeu057479.1 Olea europaea HOM05D000002 ORTHO05D000001 3.2e-10 69.3 157 29.3
Oeu008172.1 Olea europaea HOM05D000002 ORTHO05D000001 4.2e-10 68.9 114 30.7
Oeu057465.1 Olea europaea HOM05D000002 ORTHO05D000001 4.2e-10 68.9 157 29.3
COL.COLO4_33694 Corchorus olitorius HOM05D000002 ORTHO05D000001 5.5e-10 68.6 103 35.0
Hma1.2p1_0315F.1_g122550 Hydrangea macrophylla HOM05D004993 ORTHO05D000001 5.5e-10 68.6 118 33.1
QL04p082088 Quercus lobata HOM05D000002 ORTHO05D000001 7.2e-10 68.2 128 32.0
Sabra01G0117000 Salix brachista HOM05D000002 ORTHO05D000001 7.2e-10 68.2 138 27.5
COL.COLO4_20725 Corchorus olitorius HOM05D000002 ORTHO05D000001 9.4e-10 67.8 94 34.0
ECA246G2243 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.4e-10 67.8 127 30.7
Hma1.2p1_0270F.1_g108510 Hydrangea macrophylla HOM05D004993 ORTHO05D000001 9.4e-10 67.8 107 33.6
HanXRQChr17g0570071 Helianthus annuus HOM05D000002 ORTHO05D000001 1.2e-09 67.4 169 24.9
Hma1.2p1_0473F.1_g160130 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.1e-09 66.6 135 28.1
COL.COLO4_06456 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.7e-09 66.2 108 31.5
HanXRQChr17g0566031 Helianthus annuus HOM05D000002 ORTHO05D000001 4.7e-09 65.5 161 29.8
HanXRQChr15g0491201 Helianthus annuus HOM05D000002 ORTHO05D000001 6.1e-09 65.1 116 30.2
ECA247G3681 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-08 63.9 148 27.7
HanXRQChr03g0064201 Helianthus annuus HOM05D000002 ORTHO05D000001 1.4e-08 63.9 164 29.3
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 1.4e-08 63.9 110 33.6
PGR102G3059 Punica granatum HOM05D000002 ORTHO05D000001 3.9e-08 62.4 150 29.3
Sopen01g008940 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-08 62.0 91 34.1
Sopen07g023540 Solanum pennellii HOM05D000002 ORTHO05D000001 5.2e-08 62.0 136 30.9
CiPaw.14G131300 Carya illinoinensis HOM05D000750 ORTHO05D000714 8.8e-08 61.2 77 35.1
SHI14897 Sapria himalayana HOM05D000002 ORTHO05D000001 8.8e-08 61.2 71 40.8
HanXRQChr00c0303g0573321 Helianthus annuus HOM05D000002 ORTHO05D000001 1.1e-07 60.8 130 28.5
HanXRQChr07g0202651 Helianthus annuus HOM05D000002 ORTHO05D000001 1.1e-07 60.8 153 30.1
ECA247G0128 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-07 60.5 147 26.5
HanXRQChr10g0315391 Helianthus annuus HOM05D000002 ORTHO05D000001 1.5e-07 60.5 155 31.0
Sopen08g008710 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-07 60.5 83 34.9
COL.COLO4_29402 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.6e-07 59.7 75 36.0
ECA246G2563 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.3e-07 59.3 166 25.9
HanXRQChr11g0320841 Helianthus annuus HOM05D000002 ORTHO05D000001 3.3e-07 59.3 106 30.2
HanXRQChr17g0568341 Helianthus annuus HOM05D000002 ORTHO05D000001 4.4e-07 58.9 79 35.4
QL03p028934 Quercus lobata HOM05D000002 ORTHO05D000001 4.4e-07 58.9 72 40.3
Hma1.2p1_0022F.1_g014640 Hydrangea macrophylla HOM05D004993 ORTHO05D012706 5.7e-07 58.5 162 28.4
Hma1.2p1_0000F.1_g000910 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.7e-07 57.8 106 33.0
Atru.chr2.1090 Acer truncatum HOM05D000034 ORTHO05D000001 2.2e-06 56.6 105 33.3
COL.COLO4_38403 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.2e-06 56.6 90 32.2
SHI38837 Sapria himalayana HOM05D004993 ORTHO05D000001 2.2e-06 56.6 63 46.0
HanXRQChr09g0251421 Helianthus annuus HOM05D000530 ORTHO05D003341 2.8e-06 56.2 133 25.6
SHI18682 Sapria himalayana HOM05D004993 ORTHO05D000001 2.8e-06 56.2 75 40.0
Hma1.2p1_1270F.1_g271670 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.8e-06 55.5 140 29.3
Nitab4.5_0009589g0010 Nicotiana tabacum HOM05D010760 ORTHO05D003210 4.8e-06 55.5 115 30.4
SHI32039 Sapria himalayana HOM05D004993 ORTHO05D000001 4.8e-06 55.5 71 42.3
Hma1.2p1_1397F.1_g280780 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.3e-06 55.1 119 32.8
Nitab4.5_0000305g0090 Nicotiana tabacum HOM05D002833 ORTHO05D000001 6.3e-06 55.1 117 30.8
SHI42894 Sapria himalayana HOM05D000002 ORTHO05D000001 6.3e-06 55.1 56 48.2
HanXRQChr03g0070601 Helianthus annuus HOM05D000002 ORTHO05D000001 8.2e-06 54.7 79 32.9


User provided reference genes

Program Settings