Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g13792 Brassica carinata HOM05D000260 ORTHO05D091094 4.0e-57 224.6 116 100.0
BcaB03g15515 Brassica carinata HOM05D000260 ORTHO05D009354 3.2e-14 82.0 58 72.4
C06p36490 Brassica napus HOM05D000260 ORTHO05D009354 1.2e-11 73.6 59 67.8
A07p31300 Brassica napus HOM05D000260 ORTHO05D009354 1.5e-11 73.2 59 67.8
BraA07t30763Z Brassica rapa HOM05D000260 ORTHO05D009354 1.5e-11 73.2 59 67.8
Sp5g25020 Schrenkiella parvula HOM05D000260 ORTHO05D009354 2.0e-11 72.8 58 67.2
BcaC08g45855 Brassica carinata HOM05D000260 ORTHO05D009354 4.4e-11 71.6 59 66.1
BolC6t38763H Brassica oleracea HOM05D000260 ORTHO05D009354 4.4e-11 71.6 59 66.1
Thhalv10018260m.g Eutrema salsugineum HOM05D000260 ORTHO05D009354 4.4e-11 71.6 61 67.2
AL22U10070 Arabidopsis lyrata HOM05D000260 ORTHO05D009354 1.7e-07 59.7 68 54.4
AT1G69910 Arabidopsis thaliana HOM05D000260 ORTHO05D009354 6.6e-07 57.8 68 55.9
Aa31LG4G10900 Aethionema arabicum HOM05D000260 ORTHO05D009354 8.6e-07 57.4 54 55.6
Lsat_1_v5_gn_4_8060 Lactuca sativa HOM05D000260 ORTHO05D009354 2.5e-06 55.8 46 60.9
CARHR062990 Cardamine hirsuta HOM05D000260 ORTHO05D009354 5.5e-06 54.7 68 54.4
ECA234G2020 Erigeron canadensis HOM05D000260 ORTHO05D028245 5.5e-06 54.7 46 58.7
Carub.0002s1661 Capsella rubella HOM05D000260 ORTHO05D009354 7.2e-06 54.3 69 56.5
THA.LOC104822936 Tarenaya hassleriana HOM05D000260 ORTHO05D009354 9.5e-06 53.9 67 50.7


User provided reference genes

Program Settings