Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g11860 Brassica carinata HOM05D021391 ORTHO05D016766 8.2e-83 310.5 170 100.0
BcaC02g11861 Brassica carinata HOM05D021391 ORTHO05D016766 8.2e-83 310.5 170 100.0
C04p10490 Brassica napus HOM05D021391 ORTHO05D016766 8.2e-83 310.5 170 100.0
A07p04350 Brassica napus HOM05D021391 ORTHO05D016766 2.3e-69 265.8 170 87.1
BcaC04g23617 Brassica carinata HOM05D021391 ORTHO05D016766 2.2e-67 259.2 171 86.5
Sp1g21690 Schrenkiella parvula HOM05D003373 ORTHO05D004419 2.8e-38 162.5 133 74.4
BolC9t53565H Brassica oleracea HOM05D021391 ORTHO05D016766 3.5e-33 145.6 81 92.6
BcaB07g32385 Brassica carinata HOM05D003373 ORTHO05D004419 3.3e-31 139.0 136 70.6
BcaB03g14104 Brassica carinata HOM05D003373 ORTHO05D004419 1.4e-29 133.7 137 65.0
BolC5t31088H Brassica oleracea HOM05D003373 ORTHO05D004419 5.2e-29 131.7 135 65.9
C05p23700 Brassica napus HOM05D003373 ORTHO05D004419 3.4e-28 129.0 109 69.7
Thhalv10007745m.g Eutrema salsugineum HOM05D003373 ORTHO05D004419 2.9e-27 125.9 137 63.5
BcaC07g39253 Brassica carinata HOM05D003373 ORTHO05D004419 6.4e-27 124.8 111 66.7
C08p22560 Brassica napus HOM05D003373 ORTHO05D004419 6.4e-27 124.8 111 66.7
BolC8t49893H Brassica oleracea HOM05D003373 ORTHO05D004419 6.4e-27 124.8 111 66.7
BraA09t39545Z Brassica rapa HOM05D003373 ORTHO05D006520 1.9e-26 123.2 110 68.2
BcaB03g11980 Brassica carinata HOM05D003373 ORTHO05D004419 5.4e-26 121.7 138 62.3
A09p40480 Brassica napus HOM05D003373 ORTHO05D004419 1.2e-25 120.6 110 67.3
BraA08t34708Z Brassica rapa HOM05D003373 ORTHO05D004419 1.6e-25 120.2 139 64.7
A08p27730 Brassica napus HOM05D003373 ORTHO05D004419 2.7e-25 119.4 138 63.8
AL1G38400 Arabidopsis lyrata HOM05D003373 ORTHO05D004419 1.5e-20 103.6 150 53.3
AT1G27090 Arabidopsis thaliana HOM05D003373 ORTHO05D004419 2.2e-19 99.8 151 51.0
Carub.0001s2388 Capsella rubella HOM05D003373 ORTHO05D004419 1.9e-18 96.7 147 48.3
CARHR024810 Cardamine hirsuta HOM05D003373 ORTHO05D004419 4.3e-15 85.5 177 46.3
Manes.05G095400 Manihot esculenta HOM05D003373 ORTHO05D004419 1.6e-06 57.0 118 45.8


User provided reference genes

Program Settings