Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g11529 Brassica carinata HOM05D007451 ORTHO05D009399 2.8e-80 302.0 163 100.0
BcaB02g09525 Brassica carinata HOM05D007451 ORTHO05D009399 3.3e-73 278.5 163 90.8
BraA05t20052Z Brassica rapa HOM05D007451 ORTHO05D009399 3.7e-72 275.0 191 81.7
Sp4g16840 Schrenkiella parvula HOM05D007451 ORTHO05D009399 1.3e-69 266.5 163 89.0
Thhalv10017344m.g Eutrema salsugineum HOM05D007451 ORTHO05D009399 3.8e-69 265.0 163 87.1
AL4G30550 Arabidopsis lyrata HOM05D007451 ORTHO05D009399 7.9e-67 257.3 163 82.8
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 6.7e-66 254.2 138 99.3
AT2G34580 Arabidopsis thaliana HOM05D007451 ORTHO05D009399 1.5e-65 253.1 163 82.2
Carub.0004s1625 Capsella rubella HOM05D007451 ORTHO05D009399 2.8e-64 248.8 163 81.6
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 1.2e-62 243.4 137 95.6
CARHR128670 Cardamine hirsuta HOM05D007451 ORTHO05D009399 1.5e-62 243.0 161 82.0
C04p14410 Brassica napus HOM05D007451 ORTHO05D009399 4.4e-41 171.8 133 72.9
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 3.1e-39 165.6 157 59.2
GSVIVG01021497001 Vitis vinifera HOM05D007451 ORTHO05D009399 5.3e-39 164.9 160 60.0
BolC4t27857H Brassica oleracea HOM05D007451 ORTHO05D009399 9.1e-39 164.1 99 89.9
Potri.004G132600 Populus trichocarpa HOM05D007451 ORTHO05D009399 2.9e-37 159.1 161 54.0
CiPaw.10G091600 Carya illinoinensis HOM05D007451 ORTHO05D009399 1.1e-36 157.1 161 53.4
Manes.17G070400 Manihot esculenta HOM05D007451 ORTHO05D009399 2.5e-36 156.0 161 52.8
Thecc.06G150100 Theobroma cacao HOM05D007451 ORTHO05D009399 1.2e-33 147.1 160 52.5
RcHm_v2.0_Chr5g0014241 Rosa chinensis HOM05D007451 ORTHO05D009399 3.4e-33 145.6 160 53.1
Lj1C1189G10 Lonicera japonica HOM05D007451 ORTHO05D009399 1.3e-32 143.7 161 52.2
CANSAT35G1195 Cannabis sativa HOM05D007451 ORTHO05D009399 1.7e-32 143.3 161 49.7
Lsat_1_v5_gn_7_28421 Lactuca sativa HOM05D007451 ORTHO05D009399 6.3e-32 141.4 160 52.5
Oeu031273.1 Olea europaea HOM05D007451 ORTHO05D009399 2.4e-31 139.4 151 54.3
TWI73G0492 Tripterygium wilfordii HOM05D007451 ORTHO05D009399 2.4e-31 139.4 160 51.2
TAR624G0819 Trochodendron aralioides HOM05D007451 ORTHO05D009399 2.4e-31 139.4 160 50.6
Sabra04G0085400 Salix brachista HOM05D007451 ORTHO05D009399 4.1e-31 138.7 187 44.9
CSS0045800 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 7.0e-31 137.9 144 53.5
HanXRQChr04g0114281 Helianthus annuus HOM05D007451 ORTHO05D009399 1.2e-30 137.1 153 51.0
Ciclev10018276m.g Citrus clementina HOM05D007451 ORTHO05D009399 1.6e-30 136.7 160 51.2
FAN21G0862 Fragaria x ananassa HOM05D007451 ORTHO05D009399 2.0e-30 136.3 180 50.0
PSO675G9053 Papaver somniferum HOM05D007451 ORTHO05D009399 7.7e-30 134.4 160 48.1
FAN11G0575 Fragaria x ananassa HOM05D007451 ORTHO05D009399 1.0e-29 134.0 172 49.4
PSO541G4911 Papaver somniferum HOM05D007451 ORTHO05D009399 1.3e-29 133.7 160 46.9
ECA246G3905 Erigeron canadensis HOM05D007451 ORTHO05D009399 1.7e-29 133.3 151 50.3
Sc17g0004890 Simmondsia chinensis HOM05D007451 ORTHO05D009399 2.3e-29 132.9 160 47.5
BolC4t23024H Brassica oleracea HOM05D007451 ORTHO05D009399 2.9e-29 132.5 118 66.1
Nitab4.5_0003044g0100 Nicotiana tabacum HOM05D007451 ORTHO05D009399 1.1e-28 130.6 160 48.1
Medtr4g084470 Medicago truncatula HOM05D007451 ORTHO05D009399 1.9e-28 129.8 162 47.5
TPR.G38261 Trifolium pratense HOM05D007451 ORTHO05D009399 1.6e-27 126.7 145 49.0
CAN.G65.121 Capsicum annuum HOM05D007451 ORTHO05D009399 2.8e-27 125.9 156 46.8
Gohir.A10G041200 Gossypium hirsutum HOM05D007451 ORTHO05D009399 6.1e-27 124.8 161 47.8
Gohir.D10G042000 Gossypium hirsutum HOM05D007451 ORTHO05D009399 6.1e-27 124.8 161 47.8
Gorai.011G044600 Gossypium raimondii HOM05D007451 ORTHO05D009399 6.1e-27 124.8 161 47.8
VMungo0251G0908 Vigna mungo HOM05D007451 ORTHO05D009399 8.0e-27 124.4 151 49.7
arahy.Tifrunner.gnm1.ann1.ZU2BT9 Arachis hypogaea HOM05D007451 ORTHO05D009399 1.0e-26 124.0 155 46.5
EL10Ac8g19670 Beta vulgaris HOM05D007451 ORTHO05D009399 1.0e-26 124.0 152 48.0
Eucgr.E03355 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.0e-26 124.0 144 48.6
Psat7g130000 Pisum sativum HOM05D007451 ORTHO05D009399 1.0e-26 124.0 151 47.7
THA.LOC104814695 Tarenaya hassleriana HOM05D007451 ORTHO05D009399 1.0e-26 124.0 151 50.3
Phvul.002G096800 Phaseolus vulgaris HOM05D007451 ORTHO05D009399 3.0e-26 122.5 151 49.7
EL10Ac8g19669 Beta vulgaris HOM05D007451 ORTHO05D009399 8.9e-26 120.9 138 51.4
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 2.0e-25 119.8 147 51.0
Prupe.4G081100 Prunus persica HOM05D007451 ORTHO05D009399 2.0e-25 119.8 148 50.0
arahy.Tifrunner.gnm1.ann1.Z8IVUX Arachis hypogaea HOM05D007451 ORTHO05D009399 2.6e-25 119.4 146 45.9
C04p14350 Brassica napus HOM05D005261 ORTHO05D006180 7.5e-25 117.9 67 92.5
Rhsim02G0158600 Rhododendron simsii HOM05D007451 ORTHO05D009399 7.5e-25 117.9 179 40.2
MBI07_g23439_MAGBIO Magnolia biondii HOM05D007451 ORTHO05D009399 9.8e-25 117.5 161 42.9
Cc10_g10170 Coffea canephora HOM05D007451 ORTHO05D009399 1.7e-24 116.7 144 49.3
Actinidia07699 Actinidia chinensis HOM05D007451 ORTHO05D009399 1.1e-23 114.0 137 51.1
Glyma.20G018400 Glycine max HOM05D007451 ORTHO05D009399 1.1e-23 114.0 144 46.5
Cfa000938 Carpinus fangiana HOM05D007451 ORTHO05D009399 3.2e-23 112.5 161 43.5
Aqoxy1G01697 Aquilegia oxysepala HOM05D007451 ORTHO05D009399 4.1e-23 112.1 159 42.8
BcaB06g28783 Brassica carinata HOM05D007451 ORTHO05D009399 5.4e-23 111.7 72 80.6
MD05G1283500 Malus domestica HOM05D007451 ORTHO05D009399 5.4e-23 111.7 148 47.3
Hma1.2p1_0286F.1_g114180 Hydrangea macrophylla HOM05D007451 ORTHO05D009399 2.0e-22 109.8 163 42.9
Eucgr.B02066 Eucalyptus grandis HOM05D007451 ORTHO05D009399 3.5e-22 109.0 144 45.1
AUR62002741 Chenopodium quinoa HOM05D007451 ORTHO05D009399 7.8e-22 107.8 138 44.9
QL05p057933 Quercus lobata HOM05D007451 ORTHO05D009399 1.0e-21 107.5 146 45.2
AUR62030193 Chenopodium quinoa HOM05D007451 ORTHO05D009399 1.7e-21 106.7 138 45.7
AUR62002733 Chenopodium quinoa HOM05D007451 ORTHO05D009399 3.9e-21 105.5 138 44.2
Nn4g26566 Nelumbo nucifera HOM05D007451 ORTHO05D009399 8.6e-21 104.4 161 42.9
Nitab4.5_0003838g0080 Nicotiana tabacum HOM05D007451 ORTHO05D009399 8.6e-21 104.4 161 41.6
DCAR_003911 Daucus carota HOM05D007451 ORTHO05D009399 1.1e-20 104.0 107 55.1
Gorai.008G053800 Gossypium raimondii HOM05D007451 ORTHO05D009399 1.5e-20 103.6 141 45.4
Gohir.D12G050550 Gossypium hirsutum HOM05D007451 ORTHO05D009399 1.9e-20 103.2 144 45.1
Gorai.004G185100 Gossypium raimondii HOM05D007451 ORTHO05D009399 3.6e-19 99.0 144 44.4
BcaC02g11526 Brassica carinata HOM05D007451 ORTHO05D009399 8.0e-19 97.8 59 88.1
Dinv32247 Davidia involucrata HOM05D007451 ORTHO05D009399 8.0e-19 97.8 143 44.8
CSS0015635 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 2.0e-17 93.2 131 46.6
Gohir.D12G174800 Gossypium hirsutum HOM05D007451 ORTHO05D009399 2.0e-17 93.2 136 44.1
Glyma.07G220100 Glycine max HOM05D007451 ORTHO05D009399 2.6e-17 92.8 151 41.7
FvH4_3g05500 Fragaria vesca HOM05D007451 ORTHO05D009399 1.7e-16 90.1 160 41.2
Eucgr.I02284 Eucalyptus grandis HOM05D007451 ORTHO05D009399 8.3e-16 87.8 165 37.6
Eucgr.H02213 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.4e-15 87.0 89 52.8
Lalb_Chr16g0385141 Lupinus albus HOM05D007451 ORTHO05D009399 2.4e-15 86.3 156 39.1
Duzib192G0695 Durio zibethinus HOM05D007451 ORTHO05D009399 3.2e-15 85.9 145 40.0
Lj4g0011610 Lotus japonicus HOM05D007451 ORTHO05D009399 1.6e-14 83.6 107 41.1
arahy.Tifrunner.gnm1.ann1.WBAN0Y Arachis hypogaea HOM05D007451 ORTHO05D009399 6.2e-11 71.6 119 38.7
Zm00001eb204550 Zea mays HOM05D007451 ORTHO05D009399 8.0e-11 71.2 125 39.2
Eucgr.J01485 Eucalyptus grandis HOM05D007451 ORTHO05D009399 2.6e-09 66.2 96 40.6
vmacro10959 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 1.3e-08 63.9 74 44.6
Eucgr.C02335 Eucalyptus grandis HOM05D007451 ORTHO05D009399 2.9e-08 62.8 78 43.6
AagrBONN_evm.TU.Sc2ySwM_228.4815 Anthoceros agrestis HOM05D007451 ORTHO05D009399 2.4e-07 59.7 148 28.4
Haze_05609 Corylus avellana HOM05D007451 ORTHO05D009399 7.1e-07 58.2 68 45.6
Os02g0244000 Oryza sativa ssp. japonica HOM05D007451 ORTHO05D009399 7.1e-07 58.2 114 34.2
Hund21547 Selenicereus undatus HOM05D007451 ORTHO05D009399 4.6e-06 55.5 144 34.0
Hund21366 Selenicereus undatus HOM05D007451 ORTHO05D009399 6.0e-06 55.1 144 34.0


User provided reference genes

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