Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g10560 Brassica carinata HOM05D003835 ORTHO05D004930 2.1e-205 718.8 355 100.0
BcaC05g28695 Brassica carinata HOM05D003835 ORTHO05D004930 2.3e-135 486.1 364 72.3
BcaB01g01376 Brassica carinata HOM05D003835 ORTHO05D004930 1.3e-122 443.7 331 68.3
BcaC05g27589 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-105 387.5 358 62.0
BcaC03g16671 Brassica carinata HOM05D003835 ORTHO05D004930 3.0e-95 352.8 364 57.7
BcaB06g26909 Brassica carinata HOM05D003835 ORTHO05D004930 3.9e-95 352.4 354 54.2
BcaC09g49698 Brassica carinata HOM05D003835 ORTHO05D004930 2.6e-91 339.7 255 67.5
BcaB01g01339 Brassica carinata HOM05D003835 ORTHO05D004930 3.8e-90 335.9 340 54.7
BcaC03g17353 Brassica carinata HOM05D003835 ORTHO05D004930 1.2e-88 330.9 322 59.6
BcaC01g02153 Brassica carinata HOM05D003835 ORTHO05D004930 5.2e-87 325.5 357 54.9
BraA05t21182Z Brassica rapa HOM05D003835 ORTHO05D004930 1.5e-86 323.9 328 57.3
BcaC03g16196 Brassica carinata HOM05D003835 ORTHO05D004930 3.6e-80 302.8 287 62.4
BcaC06g36461 Brassica carinata HOM05D003835 ORTHO05D004930 8.8e-79 298.1 324 57.1
BolC8t47793H Brassica oleracea HOM05D003835 ORTHO05D004930 9.7e-78 294.7 300 52.3
BcaC06g35964 Brassica carinata HOM05D003835 ORTHO05D004930 2.2e-77 293.5 322 56.5
BcaC04g20623 Brassica carinata HOM05D003835 ORTHO05D004930 2.4e-76 290.0 314 50.3
BcaC02g10813 Brassica carinata HOM05D003835 ORTHO05D004930 4.5e-75 285.8 338 48.2
BcaC04g20891 Brassica carinata HOM05D003835 ORTHO05D004930 9.4e-73 278.1 283 54.1
BcaC04g20991 Brassica carinata HOM05D003835 ORTHO05D004930 9.4e-73 278.1 342 47.4
BcaC04g20985 Brassica carinata HOM05D003835 ORTHO05D004930 1.0e-71 274.6 275 54.2
BolC4t24276H Brassica oleracea HOM05D003835 ORTHO05D004930 5.9e-67 258.8 303 54.1
BcaC01g02043 Brassica carinata HOM05D003835 ORTHO05D004930 1.0e-66 258.1 342 45.0
BcaC04g20843 Brassica carinata HOM05D003835 ORTHO05D004930 2.3e-66 256.9 298 49.3
BcaC05g27575 Brassica carinata HOM05D003835 ORTHO05D004930 8.9e-63 245.0 278 49.6
BcaC04g20857 Brassica carinata HOM05D003835 ORTHO05D004930 2.6e-62 243.4 342 44.2
BcaB07g33106 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-57 228.0 226 54.4
BcaNung05987 Brassica carinata HOM05D003835 ORTHO05D004930 3.3e-57 226.5 319 43.9
BcaC06g36022 Brassica carinata HOM05D003835 ORTHO05D004930 2.1e-56 223.8 273 46.2
BolC8t50199H Brassica oleracea HOM05D003835 ORTHO05D004930 1.4e-55 221.1 147 74.8
BraA08t32792Z Brassica rapa HOM05D003835 ORTHO05D004930 6.8e-55 218.8 288 49.7
BcaC03g16445 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-54 217.6 251 50.2
BcaC02g10732 Brassica carinata HOM05D003835 ORTHO05D004930 1.9e-52 210.7 297 41.8
BcaC01g01952 Brassica carinata HOM05D003835 ORTHO05D004930 3.2e-52 209.9 232 50.4
BcaC07g39533 Brassica carinata HOM05D003835 ORTHO05D004930 4.1e-52 209.5 144 73.6
BcaC05g27891 Brassica carinata HOM05D003835 ORTHO05D004930 3.9e-50 203.0 151 63.6
BcaC06g36790 Brassica carinata HOM05D003835 ORTHO05D004930 1.2e-48 198.0 292 44.5
BcaB05g23456 Brassica carinata HOM05D003835 ORTHO05D004930 3.6e-48 196.4 137 68.6
BcaC01g02168 Brassica carinata HOM05D003835 ORTHO05D004930 2.6e-46 190.3 287 42.5
BcaC05g27887 Brassica carinata HOM05D003835 ORTHO05D004930 2.6e-46 190.3 287 41.5
BolC4t24052H Brassica oleracea HOM05D003835 ORTHO05D004930 1.3e-45 188.0 151 60.9
BcaC09g49664 Brassica carinata HOM05D003835 ORTHO05D004930 4.1e-44 183.0 150 60.0
BcaC01g02336 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-43 181.0 139 61.2
BolC8t47946H Brassica oleracea HOM05D003835 ORTHO05D004930 1.0e-42 178.3 220 45.9
BcaC05g27703 Brassica carinata HOM05D003835 ORTHO05D004930 3.6e-40 169.9 173 53.2
BcaC04g20805 Brassica carinata HOM05D003835 ORTHO05D004930 6.2e-40 169.1 150 56.7
BcaC02g10604 Brassica carinata HOM05D003835 ORTHO05D004930 3.1e-39 166.8 209 47.8
BcaC09g49645 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-38 164.5 216 45.8
BraA03t15672Z Brassica rapa HOM05D003835 ORTHO05D004930 2.0e-38 164.1 239 46.0
BcaC04g20851 Brassica carinata HOM05D003835 ORTHO05D004930 2.2e-37 160.6 216 43.1
BcaB01g01286 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-36 157.9 146 58.9
BraA01t02821Z Brassica rapa HOM05D003835 ORTHO05D004930 3.2e-36 156.8 171 46.8
BcaC07g37476 Brassica carinata HOM05D003835 ORTHO05D004930 4.6e-35 152.9 166 48.8
BcaC08g43746 Brassica carinata HOM05D003835 ORTHO05D004930 1.3e-34 151.4 113 63.7
BcaC04g20889 Brassica carinata HOM05D003835 ORTHO05D004930 3.0e-34 150.2 113 60.2
BcaC03g16677 Brassica carinata HOM05D003835 ORTHO05D004930 5.1e-34 149.4 113 61.1
BcaB01g01100 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-33 147.9 212 43.9
BcaC03g16533 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-33 147.9 130 60.8
BcaC09g49753 Brassica carinata HOM05D003835 ORTHO05D004930 2.5e-33 147.1 113 63.7
BcaB05g23025 Brassica carinata HOM05D003835 ORTHO05D004930 9.6e-33 145.2 132 56.8
BcaC07g37247 Brassica carinata HOM05D003835 ORTHO05D004930 2.1e-32 144.1 233 39.9
BcaB05g23138 Brassica carinata HOM05D003835 ORTHO05D004930 8.1e-32 142.1 162 50.6
BolC8t47785H Brassica oleracea HOM05D003835 ORTHO05D004930 5.2e-31 139.4 111 61.3
BcaC07g37471 Brassica carinata HOM05D003835 ORTHO05D004930 3.4e-30 136.7 111 59.5
BcaC06g35829 Brassica carinata HOM05D003835 ORTHO05D004930 9.9e-30 135.2 297 35.4
BcaC09g49552 Brassica carinata HOM05D003835 ORTHO05D004930 1.9e-28 131.0 157 45.2
BcaC06g35990 Brassica carinata HOM05D003835 ORTHO05D004930 4.2e-28 129.8 104 62.5
BcaC07g37248 Brassica carinata HOM05D003835 ORTHO05D004930 4.6e-27 126.3 97 62.9
BcaC01g02120 Brassica carinata HOM05D003835 ORTHO05D004930 3.9e-26 123.2 129 52.7
BcaC06g36783 Brassica carinata HOM05D003835 ORTHO05D004930 5.1e-26 122.9 99 62.6
BolC8t47786H Brassica oleracea HOM05D003835 ORTHO05D014092 3.3e-25 120.2 129 48.1
BolC2t10319H Brassica oleracea HOM05D003835 ORTHO05D004930 1.6e-24 117.9 89 67.4
BcaC03g16471 Brassica carinata HOM05D003835 ORTHO05D004930 1.8e-23 114.4 100 57.0
BcaC01g02227 Brassica carinata HOM05D003835 ORTHO05D004930 3.1e-23 113.6 90 62.2
BcaC03g16676 Brassica carinata HOM05D003835 ORTHO05D004930 1.2e-22 111.7 83 72.3
Carub.0008s0643 Capsella rubella HOM05D003835 ORTHO05D004930 1.2e-22 111.7 226 29.2
BcaC03g16787 Brassica carinata HOM05D003835 ORTHO05D004930 2.6e-22 110.5 83 72.3
BcaC07g37517 Brassica carinata HOM05D003835 ORTHO05D004930 4.4e-22 109.8 94 57.4
BcaC01g02117 Brassica carinata HOM05D003835 ORTHO05D004930 5.8e-22 109.4 86 68.6
BcaC03g16405 Brassica carinata HOM05D003835 ORTHO05D004930 8.4e-21 105.5 85 65.9
BcaB02g11288 Brassica carinata HOM05D003835 ORTHO05D004930 1.1e-20 105.1 81 64.2
BcaC02g10605 Brassica carinata HOM05D003835 ORTHO05D004930 3.2e-20 103.6 85 61.2
BcaC03g16553 Brassica carinata HOM05D003835 ORTHO05D004930 3.2e-20 103.6 84 67.9
AL4G20670 Arabidopsis lyrata HOM05D003835 ORTHO05D004930 3.5e-19 100.1 270 30.0
BcaC02g10387 Brassica carinata HOM05D003835 ORTHO05D004930 1.3e-18 98.2 263 32.3
BcaC04g20888 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-18 97.8 72 65.3
BcaC07g37593 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-18 97.8 76 61.8
BcaC06g35918 Brassica carinata HOM05D003835 ORTHO05D004930 1.5e-17 94.7 316 30.7
BraA06t25395Z Brassica rapa HOM05D003835 ORTHO05D004930 3.6e-16 90.1 81 59.3
BcaB08g35260 Brassica carinata HOM05D003835 ORTHO05D004930 6.2e-16 89.4 72 63.9
BcaC09g49627 Brassica carinata HOM05D003835 ORTHO05D004930 8.1e-16 89.0 75 58.7
BolC1t03343H Brassica oleracea HOM05D003835 ORTHO05D004930 3.1e-15 87.0 134 46.3
BolC2t11376H Brassica oleracea HOM05D003835 ORTHO05D004930 1.5e-14 84.7 155 34.8
BcaC04g20902 Brassica carinata HOM05D003835 ORTHO05D004930 2.6e-14 84.0 65 63.1
BcaC05g27823 Brassica carinata HOM05D003835 ORTHO05D004930 4.5e-14 83.2 68 58.8
BcaC08g44357 Brassica carinata HOM05D003835 ORTHO05D004930 4.5e-14 83.2 156 34.6
BcaC03g16228 Brassica carinata HOM05D003835 ORTHO05D004930 9.9e-14 82.0 159 34.0
BcaC06g35162 Brassica carinata HOM05D003835 ORTHO05D004930 1.3e-13 81.6 152 32.9
BolC3t19175H Brassica oleracea HOM05D003835 ORTHO05D004930 1.3e-13 81.6 155 31.6
BcaB06g26790 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-13 81.3 159 34.6
BcaC09g49670 Brassica carinata HOM05D003835 ORTHO05D004930 1.7e-13 81.3 100 46.0
BcaC03g16198 Brassica carinata HOM05D003835 ORTHO05D004930 2.9e-13 80.5 99 39.4
BcaC09g48282 Brassica carinata HOM05D003835 ORTHO05D004930 2.9e-13 80.5 94 46.8
BcaC01g02195 Brassica carinata HOM05D003835 ORTHO05D004930 3.8e-13 80.1 68 58.8
BcaB08g35159 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-12 78.2 85 42.4
BcaC03g16230 Brassica carinata HOM05D003835 ORTHO05D004930 1.4e-12 78.2 66 59.1
BcaC06g36053 Brassica carinata HOM05D003835 ORTHO05D004930 2.4e-12 77.4 72 51.4
BcaC06g36120 Brassica carinata HOM05D003835 ORTHO05D004930 4.2e-12 76.6 68 60.3
BcaC03g16751 Brassica carinata HOM05D003835 ORTHO05D004930 9.3e-12 75.5 165 29.7
BcaC03g14834 Brassica carinata HOM05D003835 ORTHO05D004930 1.6e-11 74.7 124 35.5
BcaB02g11345 Brassica carinata HOM05D003835 ORTHO05D004930 3.5e-11 73.6 99 39.4
BcaC03g16557 Brassica carinata HOM05D007458 ORTHO05D009533 3.5e-11 73.6 147 33.3
BcaC09g48541 Brassica carinata HOM05D003835 ORTHO05D004930 3.5e-11 73.6 109 35.8
BolC7t40712H Brassica oleracea HOM05D003835 ORTHO05D004930 3.5e-11 73.6 64 56.2
BolC5t32809H Brassica oleracea HOM05D007458 ORTHO05D009533 1.3e-10 71.6 93 37.6
BcaC05g28698 Brassica carinata HOM05D003835 ORTHO05D004930 1.8e-10 71.2 67 55.2
BolC6t36351H Brassica oleracea HOM05D003835 ORTHO05D014092 1.8e-10 71.2 88 47.7
BcaB06g26993 Brassica carinata HOM05D007458 ORTHO05D009533 3.0e-10 70.5 203 27.1
CANSAT25G0896 Cannabis sativa HOM05D012521 ORTHO05D011451 5.1e-10 69.7 228 27.6
BcaB03g16388 Brassica carinata HOM05D003835 ORTHO05D004930 8.7e-10 68.9 162 31.5
BcaC05g27888 Brassica carinata HOM05D003835 ORTHO05D004930 8.7e-10 68.9 98 42.9
CANSAT54G2560 Cannabis sativa HOM05D012521 ORTHO05D011451 1.5e-09 68.2 223 28.3
BraA05t21049Z Brassica rapa HOM05D003835 ORTHO05D014092 4.3e-09 66.6 90 43.3
BcaC07g37472 Brassica carinata HOM05D003835 ORTHO05D014092 7.4e-09 65.9 87 42.5
BolC3t19072H Brassica oleracea HOM05D003835 ORTHO05D004930 9.6e-09 65.5 43 72.1
CARHR257890 Cardamine hirsuta HOM05D003835 ORTHO05D004930 2.8e-08 63.9 82 41.5
BcaC04g20842 Brassica carinata HOM05D003835 ORTHO05D004930 3.7e-08 63.5 71 46.5
BcaC05g27890 Brassica carinata HOM05D003835 ORTHO05D004930 3.7e-08 63.5 50 62.0
Thhalv10002744m.g Eutrema salsugineum HOM05D003835 ORTHO05D004930 6.2e-08 62.8 67 44.8
BraA08t32793Z Brassica rapa HOM05D007458 ORTHO05D009533 8.1e-08 62.4 87 33.3
BcaC05g28699 Brassica carinata HOM05D007458 ORTHO05D009533 1.4e-07 61.6 67 43.3
BcaC07g37516 Brassica carinata HOM05D003835 ORTHO05D004930 2.4e-07 60.8 48 66.7
BolC3t19107H Brassica oleracea HOM05D003835 ORTHO05D004930 3.1e-07 60.5 38 73.7
CANSAT35G1012 Cannabis sativa HOM05D027150 ORTHO05D028423 4.0e-07 60.1 105 32.4
BraA09t38710Z Brassica rapa HOM05D003835 ORTHO05D019916 6.9e-07 59.3 171 24.6
Oeu014361.1 Olea europaea HOM05D011150 ORTHO05D011451 6.9e-07 59.3 203 25.6
BcaC02g10775 Brassica carinata HOM05D003835 ORTHO05D004930 9.0e-07 58.9 85 42.4
BcaC06g35991 Brassica carinata HOM05D003835 ORTHO05D014092 9.0e-07 58.9 83 42.2
TWI36G1308 Tripterygium wilfordii HOM05D015010 ORTHO05D019384 9.0e-07 58.9 98 34.7
BcaC05g28049 Brassica carinata HOM05D003835 ORTHO05D004930 2.6e-06 57.4 73 41.1
BraA05t21204Z Brassica rapa HOM05D003835 ORTHO05D004930 2.6e-06 57.4 31 87.1
Oeu023903.1 Olea europaea HOM05D011150 ORTHO05D011451 3.4e-06 57.0 159 28.9
BraA09t39005Z Brassica rapa HOM05D003835 ORTHO05D004930 4.5e-06 56.6 55 50.9
BcaC01g02337 Brassica carinata HOM05D003835 ORTHO05D014092 7.6e-06 55.8 87 44.8
CANSAT54G1078 Cannabis sativa HOM05D012521 ORTHO05D011451 7.6e-06 55.8 99 33.3
TWI14G0077 Tripterygium wilfordii HOM05D015010 ORTHO05D000116 7.6e-06 55.8 91 37.4


User provided reference genes

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