Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g05595 Brassica carinata HOM05D009505 ORTHO05D007552 1.0e-32 142.9 75 100.0
BcaC01g05596 Brassica carinata HOM05D009505 ORTHO05D007552 1.0e-32 142.9 75 100.0
C03p24490 Brassica napus HOM05D009505 ORTHO05D007552 1.0e-32 142.9 75 100.0
BolC3t14847H Brassica oleracea HOM05D009505 ORTHO05D007552 1.0e-32 142.9 75 100.0
BcaB01g03759 Brassica carinata HOM05D009505 ORTHO05D007552 7.2e-23 110.2 81 77.8
BcaB02g09253 Brassica carinata HOM05D009505 ORTHO05D007552 1.2e-22 109.4 79 77.2
BcaB02g09254 Brassica carinata HOM05D009505 ORTHO05D007552 1.2e-22 109.4 79 77.2
C04p10180 Brassica napus HOM05D009505 ORTHO05D007552 2.1e-22 108.6 79 77.2
BolC4t28121H Brassica oleracea HOM05D009505 ORTHO05D007552 1.4e-21 105.9 83 75.9
Sp4g20120 Schrenkiella parvula HOM05D009505 ORTHO05D007552 1.4e-21 105.9 83 78.3
BraA03t11324Z Brassica rapa HOM05D009505 ORTHO05D007552 1.8e-21 105.5 78 78.2
BraA05t19787Z Brassica rapa HOM05D009505 ORTHO05D007552 1.8e-21 105.5 79 75.9
BcaC02g07493 Brassica carinata HOM05D009505 ORTHO05D007552 3.0e-21 104.8 83 74.7
C04p66190 Brassica napus HOM05D009505 ORTHO05D007552 3.0e-21 104.8 83 74.7
A03p20830 Brassica napus HOM05D009505 ORTHO05D007552 6.7e-21 103.6 78 76.9
BcaB06g29026 Brassica carinata HOM05D009505 ORTHO05D007552 4.4e-20 100.9 81 75.3
A04p28920 Brassica napus HOM05D009505 ORTHO05D007552 2.0e-17 92.0 83 69.9
BraA04t18368Z Brassica rapa HOM05D009505 ORTHO05D007552 2.0e-17 92.0 83 69.9
Thhalv10017906m.g Eutrema salsugineum HOM05D009505 ORTHO05D007552 1.0e-16 89.7 83 68.7
A05p08210 Brassica napus HOM05D009505 ORTHO05D007552 2.9e-16 88.2 79 65.8
BcaC02g11899 Brassica carinata HOM05D009505 ORTHO05D007552 6.5e-16 87.0 76 67.1
Carub.0004s1969 Capsella rubella HOM05D009505 ORTHO05D007552 6.5e-16 87.0 86 66.3
CARHR131780 Cardamine hirsuta HOM05D009505 ORTHO05D007552 2.5e-15 85.1 83 65.1
AT2G37750 Arabidopsis thaliana HOM05D009505 ORTHO05D007552 4.2e-15 84.3 84 65.5
AL4G34680 Arabidopsis lyrata HOM05D009505 ORTHO05D007552 1.6e-14 82.4 84 65.5
Aa31sc218G10 Aethionema arabicum HOM05D009505 ORTHO05D007552 3.6e-14 81.3 82 61.0
BcaC02g11900 Brassica carinata HOM05D009505 ORTHO05D007552 2.8e-11 71.6 49 79.6
BcaC02g11902 Brassica carinata HOM05D009505 ORTHO05D007552 2.8e-11 71.6 49 79.6
BolC4t22617H Brassica oleracea HOM05D009505 ORTHO05D007552 2.8e-11 71.6 49 79.6
THA.LOC104824525 Tarenaya hassleriana HOM05D009505 ORTHO05D007552 1.8e-10 68.9 68 61.8
TWI53G1464 Tripterygium wilfordii HOM05D007574 ORTHO05D007552 4.5e-09 64.3 82 52.4
Potri.016G101900 Populus trichocarpa HOM05D007574 ORTHO05D007552 2.2e-08 62.0 92 44.6
Potri.006G090100 Populus trichocarpa HOM05D007574 ORTHO05D007552 3.8e-08 61.2 93 45.2
Manes.09G095800 Manihot esculenta HOM05D007574 ORTHO05D007552 8.5e-08 60.1 87 47.1
TWI77G0884 Tripterygium wilfordii HOM05D007574 ORTHO05D007552 1.5e-07 59.3 81 49.4
Sabra06G0068200 Salix brachista HOM05D007574 ORTHO05D007552 3.6e-06 54.7 94 44.7


User provided reference genes

Program Settings