Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g02579 Brassica carinata HOM05D020860 ORTHO05D031811 1.5e-255 885.6 423 100.0
C03p63270 Brassica napus HOM05D020860 ORTHO05D031811 1.7e-65 254.2 147 86.4
C07p01590 Brassica napus HOM05D020860 ORTHO05D031811 3.3e-64 250.0 147 85.0
C03p63260 Brassica napus HOM05D020860 ORTHO05D000129 1.2e-50 204.9 151 70.9
C07p01600 Brassica napus HOM05D020860 ORTHO05D000129 2.5e-48 197.2 168 62.5
Sp3g20410 Schrenkiella parvula HOM05D000209 ORTHO05D000129 7.1e-27 125.9 380 27.9
BraA03t13432Z Brassica rapa HOM05D000209 ORTHO05D000129 2.1e-26 124.4 399 29.6
AT3G22650 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 7.9e-26 122.5 383 26.9
A03p42860 Brassica napus HOM05D000209 ORTHO05D000129 3.9e-25 120.2 386 29.3
Thhalv10022403m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 5.1e-25 119.8 383 27.9
BcaC01g03433 Brassica carinata HOM05D000209 ORTHO05D000129 8.7e-25 119.0 393 29.3
C03p52640 Brassica napus HOM05D000209 ORTHO05D000129 8.7e-25 119.0 393 29.3
BolC3t17532H Brassica oleracea HOM05D000209 ORTHO05D000129 2.5e-24 117.5 385 28.8
Carub.0003s2280 Capsella rubella HOM05D000209 ORTHO05D000129 3.1e-22 110.5 384 26.6
CARHR098530 Cardamine hirsuta HOM05D000209 ORTHO05D000129 6.9e-22 109.4 386 26.4
BcaB04g21208 Brassica carinata HOM05D000209 ORTHO05D000129 1.7e-20 104.8 379 25.1
BcaB04g19209 Brassica carinata HOM05D000209 ORTHO05D000129 2.5e-19 100.9 381 26.5
Aa31LG8G9160 Aethionema arabicum HOM05D000209 ORTHO05D000129 1.0e-17 95.5 377 25.2
C07p48490 Brassica napus HOM05D000209 ORTHO05D000129 2.3e-17 94.4 377 24.9
C07p48430 Brassica napus HOM05D000209 ORTHO05D000129 5.1e-17 93.2 377 24.9
A03p50240 Brassica napus HOM05D000209 ORTHO05D000129 3.3e-16 90.5 374 24.9
AT4G04690 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.3e-16 90.1 377 24.7
BcaB04g21211 Brassica carinata HOM05D000209 ORTHO05D000129 7.4e-16 89.4 378 24.1
Aa31LG8G9200 Aethionema arabicum HOM05D000209 ORTHO05D000129 1.3e-15 88.6 381 24.9
BcaB03g15317 Brassica carinata HOM05D000209 ORTHO05D000129 2.2e-15 87.8 378 25.9
BcaB04g21206 Brassica carinata HOM05D000209 ORTHO05D000129 6.3e-15 86.3 384 25.5
BcaB04g21207 Brassica carinata HOM05D000209 ORTHO05D000129 8.2e-15 85.9 374 25.7
C02p21150 Brassica napus HOM05D000209 ORTHO05D000129 1.4e-14 85.1 367 24.5
Aa31LG8G9220 Aethionema arabicum HOM05D000209 ORTHO05D000129 3.1e-14 84.0 399 23.6
A01p41820 Brassica napus HOM05D000209 ORTHO05D000129 3.1e-14 84.0 386 25.6
Carub.0006s3259 Capsella rubella HOM05D000209 ORTHO05D000129 4.1e-14 83.6 394 24.9
CARHR044120 Cardamine hirsuta HOM05D000209 ORTHO05D000129 5.3e-14 83.2 377 24.7
Aa31LG5G23400 Aethionema arabicum HOM05D000209 ORTHO05D000129 6.9e-14 82.8 367 24.5
BcaB04g18601 Brassica carinata HOM05D000209 ORTHO05D000129 6.9e-14 82.8 387 24.0
A01p41870 Brassica napus HOM05D000209 ORTHO05D000129 9.1e-14 82.4 391 24.8
BolC1t05399H Brassica oleracea HOM05D000209 ORTHO05D000129 9.1e-14 82.4 389 24.4
BraA01t04256Z Brassica rapa HOM05D000209 ORTHO05D000129 9.1e-14 82.4 392 24.2
A02p13030 Brassica napus HOM05D000209 ORTHO05D000129 1.2e-13 82.0 364 24.7
BraA02t06359Z Brassica rapa HOM05D000209 ORTHO05D000129 1.2e-13 82.0 364 24.7
Thhalv10000601m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 1.2e-13 82.0 361 24.4
BcaB03g16794 Brassica carinata HOM05D000209 ORTHO05D000129 2.0e-13 81.3 382 25.7
Carub.0006s3242 Capsella rubella HOM05D000209 ORTHO05D000129 3.4e-13 80.5 387 25.1
BcaC03g14676 Brassica carinata HOM05D000209 ORTHO05D000129 5.9e-13 79.7 367 24.0
BolC2t08255H Brassica oleracea HOM05D000209 ORTHO05D000129 5.9e-13 79.7 367 24.0
BraA03t09598Z Brassica rapa HOM05D000209 ORTHO05D000129 5.9e-13 79.7 373 24.7
Aa31LG8G9170 Aethionema arabicum HOM05D000209 ORTHO05D000129 7.7e-13 79.3 394 23.1
BcaB03g15318 Brassica carinata HOM05D000209 ORTHO05D000129 7.7e-13 79.3 247 27.5
BraA01t04254Z Brassica rapa HOM05D000209 ORTHO05D000129 1.3e-12 78.6 391 23.5
A03p36550 Brassica napus HOM05D000209 ORTHO05D000129 1.7e-12 78.2 387 24.3
Carub.0006s3251 Capsella rubella HOM05D000209 ORTHO05D000129 3.8e-12 77.0 391 24.0
Aa31LG8G9190 Aethionema arabicum HOM05D000209 ORTHO05D000129 5.0e-12 76.6 345 23.2
BolC1t05401H Brassica oleracea HOM05D000209 ORTHO05D000129 1.1e-11 75.5 393 24.2
BcaC09g48098 Brassica carinata HOM05D000209 ORTHO05D000129 2.5e-11 74.3 393 24.2
BolC1t05397H Brassica oleracea HOM05D000209 ORTHO05D000129 2.5e-11 74.3 393 23.7
C03p02690 Brassica napus HOM05D000209 ORTHO05D000129 3.2e-11 73.9 308 25.6
C03p54080 Brassica napus HOM05D000209 ORTHO05D000129 3.2e-11 73.9 314 24.8
A03p01940 Brassica napus HOM05D000209 ORTHO05D000129 4.2e-11 73.6 386 24.1
BraA03t09563Z Brassica rapa HOM05D000209 ORTHO05D000129 4.2e-11 73.6 386 24.1
BcaC02g10451 Brassica carinata HOM05D001808 ORTHO05D001747 4.7e-10 70.1 32 90.6
BcaB01g05954 Brassica carinata HOM05D000209 ORTHO05D000129 6.1e-10 69.7 307 24.4
Aa31LG8G9180 Aethionema arabicum HOM05D000209 ORTHO05D000129 1.4e-09 68.6 237 24.1
BcaC09g48093 Brassica carinata HOM05D000209 ORTHO05D000129 3.0e-09 67.4 82 37.8
BcaC06g36306 Brassica carinata HOM05D020860 ORTHO05D091946 3.9e-09 67.0 32 90.6
Thhalv10015788m.g Eutrema salsugineum HOM05D000209 ORTHO05D000129 5.1e-09 66.6 83 43.4
AL3G35490 Arabidopsis lyrata HOM05D000209 ORTHO05D000129 8.8e-09 65.9 82 39.0
Sp6g23470 Schrenkiella parvula HOM05D000209 ORTHO05D000129 1.5e-08 65.1 84 39.3
BolC7t45354H Brassica oleracea HOM05D000209 ORTHO05D000129 2.0e-08 64.7 263 25.9
BolC7t45357H Brassica oleracea HOM05D000209 ORTHO05D000129 2.0e-08 64.7 263 25.9
CARHR238210 Cardamine hirsuta HOM05D000209 ORTHO05D000129 3.3e-08 63.9 170 31.8
BcaB04g18597 Brassica carinata HOM05D000209 ORTHO05D000129 9.7e-08 62.4 87 36.8
BcaB04g21209 Brassica carinata HOM05D000209 ORTHO05D000129 1.3e-07 62.0 83 37.3
Carub.0006s3257 Capsella rubella HOM05D000209 ORTHO05D000129 2.2e-07 61.2 149 30.9
BcaB03g16795 Brassica carinata HOM05D000209 ORTHO05D000129 3.7e-07 60.5 143 31.5
BcaB04g21210 Brassica carinata HOM05D000209 ORTHO05D000129 3.7e-07 60.5 84 34.5
BcaC09g48092 Brassica carinata HOM05D000209 ORTHO05D000129 4.8e-07 60.1 90 33.3
AT1G77650 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 6.3e-07 59.7 384 22.1
BcaC09g48095 Brassica carinata HOM05D000209 ORTHO05D000129 6.3e-07 59.7 90 33.3
AT3G08750 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.1e-06 58.9 169 28.4
BcaB04g18599 Brassica carinata HOM05D000209 ORTHO05D000129 1.1e-06 58.9 98 29.6
BcaB04g18600 Brassica carinata HOM05D000209 ORTHO05D000129 1.1e-06 58.9 98 29.6
BcaB04g21204 Brassica carinata HOM05D000209 ORTHO05D000129 1.1e-06 58.9 83 37.3
AT3G16820 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 1.8e-06 58.2 264 23.1
BraA03t12822Z Brassica rapa HOM05D000209 ORTHO05D000129 2.4e-06 57.8 91 34.1
BolC3t17700H Brassica oleracea HOM05D000209 ORTHO05D000129 3.1e-06 57.4 261 23.4
AT3G10430 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 4.1e-06 57.0 202 28.2
A03p02340 Brassica napus HOM05D000209 ORTHO05D000129 4.1e-06 57.0 184 28.3
A05p00430 Brassica napus HOM05D000209 ORTHO05D000129 4.1e-06 57.0 87 31.0
BraA05t19041Z Brassica rapa HOM05D000209 ORTHO05D000129 4.1e-06 57.0 87 31.0
BcaB03g12436 Brassica carinata HOM05D000209 ORTHO05D000129 5.3e-06 56.6 141 29.8
A01p41830 Brassica napus HOM05D000209 ORTHO05D000129 7.0e-06 56.2 82 36.6


User provided reference genes

Program Settings