Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g36758 Brassica carinata HOM05D004483 ORTHO05D005609 3.0e-182 641.7 330 100.0
A02p04370 Brassica napus HOM05D004483 ORTHO05D005609 7.5e-173 610.5 330 95.5
C02p09220 Brassica napus HOM05D004483 ORTHO05D005609 7.5e-173 610.5 330 95.5
BolC2t06830H Brassica oleracea HOM05D004483 ORTHO05D005609 7.5e-173 610.5 330 95.5
BraA02t05401Z Brassica rapa HOM05D004483 ORTHO05D005609 7.5e-173 610.5 330 95.5
Sp6g26600 Schrenkiella parvula HOM05D004483 ORTHO05D005609 6.3e-172 607.4 330 94.8
AL6G28710 Arabidopsis lyrata HOM05D004483 ORTHO05D005609 1.4e-171 606.3 330 94.5
Thhalv10014088m.g Eutrema salsugineum HOM05D004483 ORTHO05D005609 1.8e-171 605.9 330 94.5
CARHR195560 Cardamine hirsuta HOM05D004483 ORTHO05D005609 2.4e-171 605.5 330 94.5
AT5G17620 Arabidopsis thaliana HOM05D004483 ORTHO05D005609 2.0e-170 602.4 330 94.2
Carub.0006s1586 Capsella rubella HOM05D004483 ORTHO05D005609 2.0e-170 602.4 330 93.9
Aa31LG11G12020 Aethionema arabicum HOM05D004483 ORTHO05D005609 8.5e-169 597.0 329 93.0
BcaC03g13531 Brassica carinata HOM05D004483 ORTHO05D005609 2.4e-163 578.9 331 92.4
THA.LOC104802894 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 1.3e-156 556.6 325 88.3
Ciclev10032078m.g Citrus clementina HOM05D004483 ORTHO05D005609 1.8e-155 552.7 329 85.4
Duzib106G2041 Durio zibethinus HOM05D004483 ORTHO05D005609 2.4e-155 552.4 329 84.8
Atru.chr13.1412 Acer truncatum HOM05D004483 ORTHO05D005609 1.6e-154 549.7 329 84.5
COL.COLO4_28409 Corchorus olitorius HOM05D004483 ORTHO05D005609 2.0e-154 549.3 328 84.8
Thecc.05G233500 Theobroma cacao HOM05D004483 ORTHO05D005609 2.0e-154 549.3 329 84.8
THA.LOC104821152 Tarenaya hassleriana HOM05D004483 ORTHO05D005609 5.9e-154 547.7 314 89.5
Manes.08G157300 Manihot esculenta HOM05D004483 ORTHO05D005609 1.3e-153 546.6 325 84.9
ClCG05G002520 Citrullus lanatus HOM05D004483 ORTHO05D005609 3.9e-153 545.0 328 83.2
CsaV3_3G009970 Cucumis sativus L. HOM05D004483 ORTHO05D005609 1.5e-152 543.1 328 82.9
TWI32G0950 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 2.5e-152 542.3 329 83.0
CiPaw.12G019400 Carya illinoinensis HOM05D004483 ORTHO05D005609 7.3e-152 540.8 328 83.2
Gohir.A08G221606 Gossypium hirsutum HOM05D004483 ORTHO05D005609 1.2e-151 540.0 325 84.6
Gohir.D08G238633 Gossypium hirsutum HOM05D004483 ORTHO05D005609 1.2e-151 540.0 325 84.6
MELO3C006218.2 Cucumis melo HOM05D004483 ORTHO05D005609 1.6e-151 539.7 328 82.3
TWI34G1657 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 2.8e-151 538.9 329 82.4
Potri.013G072300 Populus trichocarpa HOM05D004483 ORTHO05D005609 3.6e-151 538.5 326 83.4
Sabra13G0062300 Salix brachista HOM05D004483 ORTHO05D005609 6.1e-151 537.7 326 83.1
Lalb_Chr07g0191411 Lupinus albus HOM05D004483 ORTHO05D005609 1.0e-150 537.0 329 82.7
RcHm_v2.0_Chr1g0342701 Rosa chinensis HOM05D004483 ORTHO05D005609 1.0e-150 537.0 327 83.5
Eucgr.E01755 Eucalyptus grandis HOM05D004483 ORTHO05D005609 1.8e-150 536.2 327 83.2
FAN10G0570 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.1e-150 535.4 329 83.6
FvH4_7g07660 Fragaria vesca HOM05D004483 ORTHO05D005609 6.8e-150 534.3 329 83.3
CAN.G992.14 Capsicum annuum HOM05D004483 ORTHO05D005609 8.9e-150 533.9 327 82.6
Peaxi162Scf00907g00220 Petunia axillaris HOM05D004483 ORTHO05D005609 2.0e-149 532.7 328 82.6
Prupe.2G104100 Prunus persica HOM05D004483 ORTHO05D005609 2.0e-149 532.7 326 83.1
PGR042G2637 Punica granatum HOM05D004483 ORTHO05D005609 2.0e-149 532.7 329 82.1
Sopen01g032950 Solanum pennellii HOM05D004483 ORTHO05D005609 2.0e-149 532.7 327 82.9
FAN06G2294 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.4e-149 531.9 329 83.0
Glyma.01G118200 Glycine max HOM05D004483 ORTHO05D005609 3.4e-149 531.9 329 83.0
Sed0016930 Sechium edule HOM05D004483 ORTHO05D005609 3.4e-149 531.9 328 81.7
PGSC0003DMG400001780 Solanum tuberosum HOM05D004483 ORTHO05D005609 3.4e-149 531.9 327 82.6
CANSAT78G0548 Cannabis sativa HOM05D004483 ORTHO05D005609 4.4e-149 531.6 325 82.8
Lj3g0001477 Lotus japonicus HOM05D004483 ORTHO05D005609 5.8e-149 531.2 328 82.3
Solyc01g081380.4 Solanum lycopersicum HOM05D004483 ORTHO05D005609 5.8e-149 531.2 327 82.9
TPR.G40218 Trifolium pratense HOM05D004483 ORTHO05D005609 5.8e-149 531.2 329 82.1
arahy.Tifrunner.gnm1.ann1.WXIR9M Arachis hypogaea HOM05D004483 ORTHO05D005609 7.5e-149 530.8 329 82.1
SGA_v2.0_scaffold95G28749 Striga asiatica HOM05D004483 ORTHO05D005609 7.5e-149 530.8 327 81.7
Migut.N01676 Erythranthe guttata HOM05D004483 ORTHO05D005609 1.3e-148 530.0 327 81.7
Nitab4.5_0000792g0040 Nicotiana tabacum HOM05D004483 ORTHO05D005609 1.3e-148 530.0 325 82.8
VMungo0331G1733 Vigna mungo HOM05D004483 ORTHO05D005609 2.2e-148 529.3 329 82.4
Dinv43526 Davidia involucrata HOM05D004483 ORTHO05D005609 2.9e-148 528.9 327 81.3
Ca_04019_v3 Cicer arietinum L. HOM05D004483 ORTHO05D005609 4.9e-148 528.1 328 82.3
Phvul.010G078100 Phaseolus vulgaris HOM05D004483 ORTHO05D005609 6.4e-148 527.7 329 82.1
Medtr5g046560 Medicago truncatula HOM05D004483 ORTHO05D005609 1.1e-147 526.9 329 81.2
Nitab4.5_0012495g0010 Nicotiana tabacum HOM05D004483 ORTHO05D005609 1.1e-147 526.9 328 82.3
TAR636G1741 Trochodendron aralioides HOM05D004483 ORTHO05D005609 1.1e-147 526.9 327 81.3
Cc00_g12630 Coffea canephora HOM05D004483 ORTHO05D005609 1.9e-147 526.2 327 80.7
Glyma.03G055200 Glycine max HOM05D004483 ORTHO05D005609 3.2e-147 525.4 329 81.8
Glyma.U006202 Glycine max HOM05D004483 ORTHO05D005609 3.2e-147 525.4 329 81.8
MSTRG.4986 Avicennia marina HOM05D004483 ORTHO05D005609 4.1e-147 525.0 327 80.7
TAR636G0699 Trochodendron aralioides HOM05D004483 ORTHO05D005609 7.0e-147 524.2 327 80.7
arahy.Tifrunner.gnm1.ann1.V3P46G Arachis hypogaea HOM05D004483 ORTHO05D005609 1.2e-146 523.5 335 80.6
Medtr6g049240 Medicago truncatula HOM05D004483 ORTHO05D005609 1.6e-146 523.1 329 80.2
MD07G1080100 Malus domestica HOM05D004483 ORTHO05D005609 2.7e-146 522.3 329 81.2
AUR62033324 Chenopodium quinoa HOM05D004483 ORTHO05D005609 7.8e-146 520.8 327 80.4
AUR62033335 Chenopodium quinoa HOM05D004483 ORTHO05D005609 7.8e-146 520.8 327 80.4
Rhsim07G0047000 Rhododendron simsii HOM05D004483 ORTHO05D005609 7.8e-146 520.8 329 78.7
AUR62004320 Chenopodium quinoa HOM05D004483 ORTHO05D005609 1.0e-145 520.4 327 80.4
CSS0029990 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 1.3e-145 520.0 329 79.6
Psat0s3493g0040 Pisum sativum HOM05D004483 ORTHO05D005609 1.7e-145 519.6 328 80.8
Rhsim07G0125200 Rhododendron simsii HOM05D004483 ORTHO05D005609 3.0e-145 518.8 329 78.4
Cpa.g.sc73.74 Carica papaya HOM05D004483 ORTHO05D005609 3.9e-145 518.5 327 82.3
GSVIVG01019237001 Vitis vinifera HOM05D004483 ORTHO05D005609 5.0e-145 518.1 381 72.4
Gorai.004G254100 Gossypium raimondii HOM05D004483 ORTHO05D005609 6.6e-145 517.7 363 75.5
HanXRQChr01g0019801 Helianthus annuus HOM05D004483 ORTHO05D005609 8.6e-145 517.3 328 78.7
CSS0005411 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 3.3e-144 515.4 329 78.4
Hund27300 Selenicereus undatus HOM05D004483 ORTHO05D005609 4.3e-144 515.0 327 80.4
ECA248G0203 Erigeron canadensis HOM05D004483 ORTHO05D005609 1.2e-143 513.5 327 78.3
Lsat_1_v5_gn_1_89980 Lactuca sativa HOM05D004483 ORTHO05D005609 2.1e-143 512.7 328 77.4
EL10Ac1g00530 Beta vulgaris HOM05D004483 ORTHO05D005609 6.2e-143 511.1 326 79.1
Sc26g0000980 Simmondsia chinensis HOM05D004483 ORTHO05D005609 8.0e-143 510.8 327 78.9
HanXRQChr11g0343751 Helianthus annuus HOM05D004483 ORTHO05D005609 1.1e-142 510.4 329 78.1
vmacro13592 Vaccinium macrocarpon HOM05D004483 ORTHO05D005609 1.4e-142 510.0 356 73.9
Nn7g36866 Nelumbo nucifera HOM05D004483 ORTHO05D005609 5.2e-142 508.1 327 79.8
Potri.019G044100 Populus trichocarpa HOM05D004483 ORTHO05D005609 1.2e-141 506.9 329 79.3
FvH4_3g28610 Fragaria vesca HOM05D004483 ORTHO05D005609 1.3e-140 503.4 327 78.3
FAN21G3783 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.5e-138 495.4 327 77.4
FAN25G2123 Fragaria x ananassa HOM05D004483 ORTHO05D005609 3.5e-138 495.4 327 77.4
PSO170G6334 Papaver somniferum HOM05D004483 ORTHO05D005609 4.6e-138 495.0 331 75.2
PSO782G4616 Papaver somniferum HOM05D004483 ORTHO05D005609 1.3e-137 493.4 331 74.9
QL04p053109 Quercus lobata HOM05D004483 ORTHO05D005609 2.5e-136 489.2 451 60.5
TAR636G1618 Trochodendron aralioides HOM05D004483 ORTHO05D005609 1.2e-135 486.9 304 80.9
ATR0736G160 Amborella trichopoda HOM05D004483 ORTHO05D005609 1.6e-135 486.5 328 75.3
CDE08G1003 Ceratophyllum demersum HOM05D004483 ORTHO05D005609 2.3e-134 482.6 328 75.6
TPR.G9231 Trifolium pratense HOM05D004483 ORTHO05D005609 2.0e-133 479.6 329 75.4
SalBow4G2429 Salvia bowleyana HOM05D004483 ORTHO05D005609 7.5e-133 477.6 300 80.3
Cfa001833 Carpinus fangiana HOM05D004483 ORTHO05D005609 3.7e-132 475.3 330 75.5
MD02G1233500 Malus domestica HOM05D004483 ORTHO05D005609 2.3e-129 466.1 329 75.4
Medtr4g017150 Medicago truncatula HOM05D004483 ORTHO05D005609 1.9e-128 463.0 329 74.8
Os01g0869500 Oryza sativa ssp. japonica HOM05D004483 ORTHO05D005609 3.6e-127 458.8 329 69.6
SEGI_12813 Sequoiadendron giganteum HOM05D004483 ORTHO05D005609 1.8e-126 456.4 330 70.6
Zm00001eb172120 Zea mays HOM05D004483 ORTHO05D005609 1.7e-124 449.9 330 68.5
FAN25G2538 Fragaria x ananassa HOM05D004483 ORTHO05D005609 5.4e-123 444.9 373 65.7
CSS0030130 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 6.0e-122 441.4 299 75.3
Actinidia05827 Actinidia chinensis HOM05D004483 ORTHO05D005609 6.6e-121 438.0 326 70.6
DCAR_025006 Daucus carota HOM05D004483 ORTHO05D005609 5.6e-120 434.9 328 69.8
A10p21790 Brassica napus HOM05D004483 ORTHO05D005609 8.1e-119 431.0 275 83.3
Lj7A559T94 Lonicera japonica HOM05D004483 ORTHO05D005609 2.6e-117 426.0 332 69.3
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 1.1e-115 420.6 279 75.6
BraA10t44239Z Brassica rapa HOM05D004483 ORTHO05D005609 2.7e-114 416.0 322 71.7
unitig_61.g26200 Utricularia gibba HOM05D004483 ORTHO05D005609 2.3e-113 412.9 323 69.3
Pp3c21_22490 Physcomitrium patens HOM05D004483 ORTHO05D005609 4.2e-107 392.1 324 60.2
SMO266G0007 Selaginella moellendorffii HOM05D004483 ORTHO05D005609 1.0e-105 387.5 318 61.9
Mapoly0042s0051 Marchantia polymorpha HOM05D004483 ORTHO05D005609 1.1e-104 384.0 330 60.9
TPR.G14295 Trifolium pratense HOM05D004483 ORTHO05D005609 4.3e-104 382.1 246 79.7
BcaC04g18774 Brassica carinata HOM05D004483 ORTHO05D005609 3.1e-102 375.9 336 66.7
CSS0038619 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 7.4e-96 354.8 233 76.0
Cfa003690 Carpinus fangiana HOM05D004483 ORTHO05D005609 9.7e-88 327.8 332 59.6
Peaxi162Scf00040g00103 Petunia axillaris HOM05D004483 ORTHO05D005609 2.8e-87 326.2 225 72.9
HPP92_018030 Vanilla planifolia HOM05D004483 ORTHO05D005609 5.0e-84 315.5 235 65.5
MD02G1233800 Malus domestica HOM05D004483 ORTHO05D005609 1.1e-83 314.3 202 80.2
C09p59550 Brassica napus HOM05D004483 ORTHO05D005609 3.3e-80 302.8 330 58.8
Haze_16727 Corylus avellana HOM05D004483 ORTHO05D005609 3.3e-80 302.8 220 74.1
Haze_25407 Corylus avellana HOM05D004483 ORTHO05D005609 1.4e-78 297.4 220 72.7
Haze_15797 Corylus avellana HOM05D004483 ORTHO05D005609 1.7e-76 290.4 220 72.3
Oeu041518.1 Olea europaea HOM05D004483 ORTHO05D005609 1.5e-72 277.3 167 82.6
CBR_g5742 Chara braunii HOM05D004483 ORTHO05D005609 2.0e-72 276.9 339 43.7
Duzib106G1834 Durio zibethinus HOM05D004483 ORTHO05D005609 1.2e-69 267.7 162 82.7
Migut.O00822 Erythranthe guttata HOM05D004483 ORTHO05D005609 3.0e-65 253.1 160 78.1
Actinidia31738 Actinidia chinensis HOM05D004483 ORTHO05D005609 3.2e-59 233.0 269 52.4
Haze_16728 Corylus avellana HOM05D004483 ORTHO05D005609 3.0e-57 226.5 133 83.5
Haze_15798 Corylus avellana HOM05D004483 ORTHO05D005609 7.7e-53 211.8 130 81.5
BolC9t58793H Brassica oleracea HOM05D004483 ORTHO05D005609 4.2e-51 206.1 163 73.0
FAN16G0129 Fragaria x ananassa HOM05D004483 ORTHO05D005609 6.8e-41 172.2 98 83.7
SHI14405 Sapria himalayana HOM05D004483 ORTHO05D005609 4.9e-39 166.0 196 47.4
SHI14408 Sapria himalayana HOM05D004483 ORTHO05D005609 1.8e-38 164.1 203 50.2
MD02G1235300 Malus domestica HOM05D004483 ORTHO05D005609 2.8e-34 150.2 89 83.1
MD09G1234100 Malus domestica HOM05D004483 ORTHO05D005609 3.1e-33 146.7 103 71.8
RcHm_v2.0_Chr2g0157591 Rosa chinensis HOM05D004483 ORTHO05D005609 3.7e-31 139.8 89 78.7
arahy.Tifrunner.gnm1.ann1.H3K4HU Arachis hypogaea HOM05D004483 ORTHO05D005609 2.0e-29 134.0 88 78.4
TWI32G0329 Tripterygium wilfordii HOM05D004483 ORTHO05D005609 2.3e-28 130.6 77 83.1
Peaxi162Scf00040g00102 Petunia axillaris HOM05D004483 ORTHO05D005609 2.5e-27 127.1 88 73.9
MD02G1233900 Malus domestica HOM05D004483 ORTHO05D005609 3.3e-27 126.7 69 85.5
Medtr5g046460 Medicago truncatula HOM05D004483 ORTHO05D005609 6.2e-26 122.5 74 83.8
RcHm_v2.0_Chr3g0469881 Rosa chinensis HOM05D004483 ORTHO05D005609 3.7e-23 113.2 72 77.8
arahy.Tifrunner.gnm1.ann1.RIX38N Arachis hypogaea HOM05D004483 ORTHO05D005609 2.4e-22 110.5 82 67.1
arahy.Tifrunner.gnm1.ann1.AX0BTM Arachis hypogaea HOM05D004483 ORTHO05D005609 3.2e-22 110.2 151 43.7
CSS0040869 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D005609 2.1e-21 107.5 64 78.1
MD02G1234000 Malus domestica HOM05D004483 ORTHO05D005609 2.3e-20 104.0 64 79.7
RcHm_v2.0_Chr1g0342751 Rosa chinensis HOM05D004483 ORTHO05D005609 8.6e-20 102.1 69 73.9
Haze_25412 Corylus avellana HOM05D004483 ORTHO05D005609 3.1e-17 93.6 63 74.6
BcaC03g13840 Brassica carinata HOM05D007309 ORTHO05D040036 3.4e-08 63.5 34 85.3
CSS0035749 Camellia sinensis var. sinensis HOM05D004483 ORTHO05D111617 8.4e-07 58.9 33 81.8
A10p19460 Brassica napus HOM05D004483 ORTHO05D101033 1.9e-06 57.8 37 75.7
arahy.Tifrunner.gnm1.ann1.LP3G76 Arachis hypogaea HOM05D004483 ORTHO05D083770 7.1e-06 55.8 82 45.1


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