Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g28583 Brassica carinata HOM05D008271 ORTHO05D024079 6.3e-57 223.8 106 100.0
C01p11410 Brassica napus HOM05D008271 ORTHO05D024079 3.0e-35 151.8 84 81.0
BcaC09g51616 Brassica carinata HOM05D008271 ORTHO05D024079 5.7e-34 147.5 84 79.8
BraA01t00922Z Brassica rapa HOM05D008271 ORTHO05D024079 1.3e-33 146.4 79 79.7
Sp7g16400 Schrenkiella parvula HOM05D008271 ORTHO05D010809 4.7e-28 127.9 105 61.0
A03p50650 Brassica napus HOM05D008271 ORTHO05D010809 6.2e-28 127.5 105 60.0
BraA03t14157Z Brassica rapa HOM05D008271 ORTHO05D010809 6.2e-28 127.5 105 60.0
BcaB04g17694 Brassica carinata HOM05D008271 ORTHO05D010809 1.5e-26 122.9 105 59.0
Sp7g16410 Schrenkiella parvula HOM05D008271 ORTHO05D010809 5.8e-26 120.9 105 57.1
AL7G36860 Arabidopsis lyrata HOM05D008271 ORTHO05D010809 7.5e-26 120.6 105 58.1
BcaNung04039 Brassica carinata HOM05D008271 ORTHO05D010809 7.5e-26 120.6 104 55.8
BolC7t45407H Brassica oleracea HOM05D008271 ORTHO05D010809 7.5e-26 120.6 104 55.8
C07p48970 Brassica napus HOM05D008271 ORTHO05D010809 1.3e-25 119.8 104 55.8
C07p48980 Brassica napus HOM05D008271 ORTHO05D010809 1.3e-25 119.8 104 55.8
BolC7t45405H Brassica oleracea HOM05D008271 ORTHO05D010809 1.3e-25 119.8 104 55.8
BcaC06g33578 Brassica carinata HOM05D008271 ORTHO05D010809 1.7e-25 119.4 104 55.8
A03p50630 Brassica napus HOM05D008271 ORTHO05D010809 1.7e-25 119.4 104 55.8
C07p49000 Brassica napus HOM05D008271 ORTHO05D010809 1.7e-25 119.4 104 55.8
BolC7t45408H Brassica oleracea HOM05D008271 ORTHO05D010809 1.7e-25 119.4 104 55.8
BraA03t14155Z Brassica rapa HOM05D008271 ORTHO05D010809 1.7e-25 119.4 104 55.8
C07p49020 Brassica napus HOM05D008271 ORTHO05D010809 3.7e-25 118.2 105 57.1
BolC7t45411H Brassica oleracea HOM05D008271 ORTHO05D010809 3.7e-25 118.2 105 57.1
BcaC06g33576 Brassica carinata HOM05D008271 ORTHO05D010809 4.9e-25 117.9 104 54.8
AT4G17718 Arabidopsis thaliana HOM05D008271 ORTHO05D010809 5.4e-24 114.4 105 57.1
BolC7t45406H Brassica oleracea HOM05D008271 ORTHO05D010809 2.0e-23 112.5 105 54.3
BcaC06g33577 Brassica carinata HOM05D008271 ORTHO05D010809 1.3e-22 109.8 104 52.9
Thhalv10027032m.g Eutrema salsugineum HOM05D008271 ORTHO05D010809 8.6e-22 107.1 104 51.9
C07p49040 Brassica napus HOM05D008271 ORTHO05D010809 3.3e-21 105.1 77 59.7
A06p19450 Brassica napus HOM05D008271 ORTHO05D010809 4.7e-20 101.3 104 49.0
Sp7g16420 Schrenkiella parvula HOM05D008271 ORTHO05D010809 8.1e-20 100.5 104 50.0
BraA06t25024Z Brassica rapa HOM05D008271 ORTHO05D010809 1.1e-19 100.1 104 49.0
BraA06t27067Z Brassica rapa HOM05D008271 ORTHO05D010809 1.4e-19 99.8 104 49.0
BolC8t48473H Brassica oleracea HOM05D008271 ORTHO05D010809 1.8e-19 99.4 104 49.0
BolC8t48475H Brassica oleracea HOM05D008271 ORTHO05D010809 1.8e-19 99.4 104 49.0
BcaC07g38069 Brassica carinata HOM05D008271 ORTHO05D010809 4.0e-19 98.2 104 49.0
BraA03t14154Z Brassica rapa HOM05D008271 ORTHO05D010809 6.8e-19 97.4 90 52.2
BraA06t25023Z Brassica rapa HOM05D008271 ORTHO05D010809 2.6e-18 95.5 104 48.1
A06p19440 Brassica napus HOM05D008271 ORTHO05D010809 3.4e-18 95.1 104 48.1
Carub.0007s2365 Capsella rubella HOM05D008271 ORTHO05D010809 5.8e-18 94.4 108 50.0
AT4G17713 Arabidopsis thaliana HOM05D008271 ORTHO05D010809 9.8e-18 93.6 106 45.3
AT2G06166 Arabidopsis thaliana HOM05D008271 ORTHO05D010809 3.7e-17 91.7 88 52.3
Aa31LG6G460 Aethionema arabicum HOM05D008271 ORTHO05D010809 1.6e-15 86.3 80 50.0
C07p48960 Brassica napus HOM05D008271 ORTHO05D032231 2.3e-14 82.4 88 50.0
BolC7t45404H Brassica oleracea HOM05D008271 ORTHO05D032231 2.3e-14 82.4 88 50.0
Carub.0005s0726 Capsella rubella HOM05D008271 ORTHO05D010809 1.2e-12 76.6 103 39.8
CARHR181630 Cardamine hirsuta HOM05D008271 ORTHO05D010809 1.1e-11 73.6 104 39.4
Carub.0007s2366 Capsella rubella HOM05D008271 ORTHO05D010809 1.8e-11 72.8 104 38.5
BcaC06g33575 Brassica carinata HOM05D008271 ORTHO05D032231 1.2e-10 70.1 69 49.3
BcaC06g33584 Brassica carinata HOM05D008271 ORTHO05D010809 3.4e-10 68.6 48 64.6
BolC1t01110H Brassica oleracea HOM05D008271 ORTHO05D024079 1.3e-09 66.6 43 67.4
Thhalv10026758m.g Eutrema salsugineum HOM05D008271 ORTHO05D010809 1.7e-09 66.2 104 38.5
Sp7g16000 Schrenkiella parvula HOM05D008271 ORTHO05D024545 2.9e-09 65.5 104 35.6
A03p50640 Brassica napus HOM05D000742 ORTHO05D000924 1.3e-06 56.6 42 59.5
BraA03t14156Z Brassica rapa HOM05D000742 ORTHO05D000924 1.3e-06 56.6 42 59.5
A03p51060 Brassica napus HOM05D008271 ORTHO05D024545 1.7e-06 56.2 110 37.3
A09p15200 Brassica napus HOM05D008271 ORTHO05D010809 3.9e-06 55.1 106 34.9


User provided reference genes

Program Settings