Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g28540 Brassica carinata HOM05D008384 ORTHO05D009842 4.0e-119 431.4 214 100.0
BcaB06g28198 Brassica carinata HOM05D008384 ORTHO05D009842 6.3e-96 354.4 190 94.2
BcaB05g24894 Brassica carinata HOM05D008384 ORTHO05D009842 1.2e-67 260.4 211 62.6
BcaB03g14887 Brassica carinata HOM05D008384 ORTHO05D009842 1.4e-66 256.9 208 63.0
BolC2t07876H Brassica oleracea HOM05D008384 ORTHO05D009842 6.1e-59 231.5 201 62.2
C09p22240 Brassica napus HOM05D008384 ORTHO05D016044 3.4e-57 225.7 165 67.3
BolC9t55138H Brassica oleracea HOM05D008384 ORTHO05D016044 1.3e-56 223.8 165 66.7
BcaB01g01529 Brassica carinata HOM05D008384 ORTHO05D009842 2.2e-56 223.0 213 58.2
BcaC04g22193 Brassica carinata HOM05D008384 ORTHO05D016044 4.1e-55 218.8 165 64.8
BolC7t44105H Brassica oleracea HOM05D008384 ORTHO05D016044 5.0e-53 211.8 191 59.2
C06p27660 Brassica napus HOM05D008384 ORTHO05D009842 4.7e-51 205.3 155 68.4
C07p35890 Brassica napus HOM05D008384 ORTHO05D016044 5.7e-49 198.4 200 56.0
BraA03t11732Z Brassica rapa HOM05D008384 ORTHO05D016044 1.8e-47 193.4 160 61.2
BolC9t59717H Brassica oleracea HOM05D008384 ORTHO05D016044 4.1e-47 192.2 113 79.6
BcaB07g31665 Brassica carinata HOM05D008384 ORTHO05D009842 4.6e-38 162.2 156 55.8
BcaC08g45148 Brassica carinata HOM05D008384 ORTHO05D009842 1.9e-36 156.8 155 55.5
C05p42740 Brassica napus HOM05D008384 ORTHO05D009842 4.7e-35 152.1 155 58.7
BcaC06g33887 Brassica carinata HOM05D008384 ORTHO05D016044 9.8e-33 144.4 138 56.5
C09p69740 Brassica napus HOM05D008384 ORTHO05D016044 2.4e-31 139.8 88 76.1
C03p32500 Brassica napus HOM05D008384 ORTHO05D009842 5.0e-29 132.1 96 66.7
BolC7t44107H Brassica oleracea HOM05D008384 ORTHO05D016044 1.5e-28 130.6 118 59.3
BolC5t33000H Brassica oleracea HOM05D008384 ORTHO05D009842 5.6e-28 128.6 141 56.0
BolC6t37937H Brassica oleracea HOM05D008384 ORTHO05D009842 9.2e-23 111.3 108 57.4
BcaC09g51574 Brassica carinata HOM05D008384 ORTHO05D016044 1.2e-22 110.9 97 58.8
BcaB01g04152 Brassica carinata HOM05D008384 ORTHO05D009842 1.6e-22 110.5 62 91.9
BcaB02g06502 Brassica carinata HOM05D000480 ORTHO05D000313 2.7e-22 109.8 136 49.3
BcaC01g04902 Brassica carinata HOM05D008384 ORTHO05D009842 6.0e-14 82.0 51 74.5
BcaC05g24567 Brassica carinata HOM05D008384 ORTHO05D009842 6.9e-10 68.6 42 66.7
BcaB08g35559 Brassica carinata HOM05D008384 ORTHO05D094156 2.6e-09 66.6 85 43.5
C03p01000 Brassica napus HOM05D008384 ORTHO05D039137 2.6e-09 66.6 88 45.5
BcaB01g06169 Brassica carinata HOM05D008384 ORTHO05D039137 1.4e-07 60.8 105 39.0
BcaB02g10725 Brassica carinata HOM05D000106 ORTHO05D000160 1.2e-06 57.8 130 33.1
C06p26260 Brassica napus HOM05D008384 ORTHO05D098484 1.2e-06 57.8 65 50.8


User provided reference genes

Program Settings