Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g28260 Brassica carinata HOM05D010012 ORTHO05D012171 8.2e-76 287.0 143 100.0
A04p21920 Brassica napus HOM05D010012 ORTHO05D012171 2.0e-58 229.2 143 82.5
BcaC02g08129 Brassica carinata HOM05D010012 ORTHO05D012171 1.6e-55 219.5 143 79.7
C04p58060 Brassica napus HOM05D010012 ORTHO05D012171 1.6e-55 219.5 143 79.7
BolC4t27332H Brassica oleracea HOM05D010012 ORTHO05D012171 1.6e-55 219.5 143 79.7
BcaC01g04994 Brassica carinata HOM05D010012 ORTHO05D012171 4.0e-54 214.9 143 78.3
C03p31310 Brassica napus HOM05D010012 ORTHO05D012171 4.0e-54 214.9 143 78.3
BolC3t15480H Brassica oleracea HOM05D010012 ORTHO05D012171 4.0e-54 214.9 143 78.3
BraA03t11837Z Brassica rapa HOM05D010012 ORTHO05D012171 8.8e-54 213.8 143 78.3
A03p26230 Brassica napus HOM05D010012 ORTHO05D012171 1.2e-53 213.4 143 78.3
BcaB01g03127 Brassica carinata HOM05D010012 ORTHO05D012171 4.5e-50 201.4 143 74.1
Sp4g11680 Schrenkiella parvula HOM05D010012 ORTHO05D012171 5.9e-50 201.1 138 76.1
BcaB02g10207 Brassica carinata HOM05D010012 ORTHO05D012171 3.2e-48 195.3 132 76.5
Thhalv10017378m.g Eutrema salsugineum HOM05D010012 ORTHO05D012171 2.1e-47 192.6 149 71.1
A07p19320 Brassica napus HOM05D010012 ORTHO05D012171 5.7e-45 184.5 143 68.5
BraA07t29637Z Brassica rapa HOM05D010012 ORTHO05D012171 5.7e-45 184.5 143 68.5
CARHR122020 Cardamine hirsuta HOM05D010012 ORTHO05D012171 4.2e-40 168.3 158 62.0
BcaC02g11018 Brassica carinata HOM05D010012 ORTHO05D012171 2.3e-38 162.5 144 64.6
C04p22150 Brassica napus HOM05D010012 ORTHO05D012171 2.3e-38 162.5 144 64.6
BolC4t23735H Brassica oleracea HOM05D010012 ORTHO05D012171 2.3e-38 162.5 144 64.6
AL4G23400 Arabidopsis lyrata HOM05D010012 ORTHO05D012171 8.9e-38 160.6 160 60.6
AT2G28870 Arabidopsis thaliana HOM05D010012 ORTHO05D012171 3.7e-36 155.2 157 59.2
Carub.0004s0986 Capsella rubella HOM05D010012 ORTHO05D012171 3.8e-33 145.2 160 56.9
DCAR_005325 Daucus carota HOM05D005967 ORTHO05D005174 9.2e-11 70.9 83 48.2
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 1.5e-08 63.5 150 33.3
Dinv16991 Davidia involucrata HOM05D005967 ORTHO05D005174 3.3e-08 62.4 155 32.9
Dinv42940 Davidia involucrata HOM05D005967 ORTHO05D005174 3.3e-08 62.4 155 32.9
Dinv43160 Davidia involucrata HOM05D005967 ORTHO05D005174 3.3e-08 62.4 155 32.9
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 9.5e-08 60.8 83 48.2
Dinv12413 Davidia involucrata HOM05D005967 ORTHO05D005174 3.6e-07 58.9 150 34.0
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 4.7e-07 58.5 125 33.6
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 6.2e-07 58.2 73 45.2
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 6.2e-07 58.2 81 43.2
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 8.1e-07 57.8 81 43.2
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 8.1e-07 57.8 79 43.0
DCAR_005974 Daucus carota HOM05D005967 ORTHO05D005174 1.1e-06 57.4 87 40.2
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 2.4e-06 56.2 122 36.1
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 3.1e-06 55.8 78 43.6
Gohir.D03G126300 Gossypium hirsutum HOM05D005967 ORTHO05D005174 4.0e-06 55.5 79 41.8
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 4.0e-06 55.5 86 34.9
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 6.8e-06 54.7 81 40.7
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 6.8e-06 54.7 72 44.4


User provided reference genes

Program Settings