Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g27425 Brassica carinata HOM05D003496 ORTHO05D003909 4.4e-69 264.6 144 100.0
A07p27660 Brassica napus HOM05D003496 ORTHO05D003909 8.1e-31 137.5 123 68.3
BraA07t30407Z Brassica rapa HOM05D003496 ORTHO05D003909 8.1e-31 137.5 123 68.3
THA.LOC104810802 Tarenaya hassleriana HOM05D003496 ORTHO05D003909 4.4e-21 105.1 122 54.1
BcaC08g45430 Brassica carinata HOM05D003496 ORTHO05D003909 4.2e-19 98.6 123 53.7
C06p30630 Brassica napus HOM05D003496 ORTHO05D003909 4.2e-19 98.6 123 53.7
BolC6t38227H Brassica oleracea HOM05D003496 ORTHO05D003909 4.2e-19 98.6 123 53.7
CARHR022630 Cardamine hirsuta HOM05D003496 ORTHO05D003909 9.3e-19 97.4 123 51.2
AT1G22260 Arabidopsis thaliana HOM05D003496 ORTHO05D003909 4.6e-18 95.1 123 50.4
Carub.0001s2183 Capsella rubella HOM05D003496 ORTHO05D003909 1.0e-17 94.0 123 51.2
AT1G22275 Arabidopsis thaliana HOM05D003496 ORTHO05D003909 6.6e-17 91.3 123 48.8
AL1G35730 Arabidopsis lyrata HOM05D003496 ORTHO05D003909 8.7e-17 90.9 123 50.4
A07p43490 Brassica napus HOM05D003496 ORTHO05D003909 2.5e-16 89.4 123 49.6
BraA07t31861Z Brassica rapa HOM05D003496 ORTHO05D003909 4.3e-16 88.6 123 51.2
Carub.0001s2181 Capsella rubella HOM05D003496 ORTHO05D003909 1.3e-15 87.0 123 48.8
C06p52130 Brassica napus HOM05D003496 ORTHO05D003909 1.6e-15 86.7 126 49.2
BolC6t40236H Brassica oleracea HOM05D003496 ORTHO05D003909 1.6e-15 86.7 126 49.2
BcaC08g47393 Brassica carinata HOM05D003496 ORTHO05D003909 2.1e-15 86.3 113 54.0
BcaB03g15988 Brassica carinata HOM05D003496 ORTHO05D003909 8.1e-15 84.3 124 50.0
BcaB02g07153 Brassica carinata HOM05D003496 ORTHO05D003909 2.4e-14 82.8 123 48.8
Thhalv10018107m.g Eutrema salsugineum HOM05D003496 ORTHO05D003909 2.0e-13 79.7 123 48.0
CARHR022660 Cardamine hirsuta HOM05D003496 ORTHO05D003909 3.2e-11 72.4 102 46.1
Sp5g33310 Schrenkiella parvula HOM05D003496 ORTHO05D003909 4.6e-10 68.6 123 43.9
BcaB03g15989 Brassica carinata HOM05D003496 ORTHO05D003909 1.0e-09 67.4 124 44.4
FvH4_5g32780 Fragaria vesca HOM05D003496 ORTHO05D003909 2.3e-09 66.2 123 35.8
Atru.chr13.1191 Acer truncatum HOM05D003496 ORTHO05D003909 3.0e-09 65.9 131 36.6
Atru.chr13.1193 Acer truncatum HOM05D003496 ORTHO05D003909 3.0e-09 65.9 131 36.6
Aa31LG7G6200 Aethionema arabicum HOM05D003496 ORTHO05D003909 3.3e-08 62.4 123 39.8
RcHm_v2.0_Chr7g0243631 Rosa chinensis HOM05D003496 ORTHO05D003909 3.3e-08 62.4 104 39.4
RcHm_v2.0_Chr0c28g0501001 Rosa chinensis HOM05D003496 ORTHO05D003909 5.6e-08 61.6 131 35.1
RcHm_v2.0_Chr0c28g0501041 Rosa chinensis HOM05D003496 ORTHO05D003909 5.6e-08 61.6 131 35.1
RcHm_v2.0_Chr7g0243551 Rosa chinensis HOM05D003496 ORTHO05D003909 5.6e-08 61.6 131 35.1
RcHm_v2.0_Chr7g0243601 Rosa chinensis HOM05D003496 ORTHO05D003909 5.6e-08 61.6 131 35.1
MD15G1368600 Malus domestica HOM05D003496 ORTHO05D003909 6.2e-07 58.2 131 36.6
TWI12G1339 Tripterygium wilfordii HOM05D003496 ORTHO05D003909 4.0e-06 55.5 131 34.4
GSVIVG01009028001 Vitis vinifera HOM05D003496 ORTHO05D003909 9.0e-06 54.3 129 33.3


User provided reference genes

Program Settings