Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g27418 Brassica carinata HOM05D007774 ORTHO05D000309 5.6e-98 360.9 181 100.0
BcaC02g10427 Brassica carinata HOM05D007774 ORTHO05D000309 1.2e-28 130.6 93 71.0
BolC4t24443H Brassica oleracea HOM05D007774 ORTHO05D000309 2.6e-26 122.9 93 68.8
BcaB05g24508 Brassica carinata HOM05D001224 ORTHO05D000309 3.4e-26 122.5 89 69.7
BcaB02g11463 Brassica carinata HOM05D001224 ORTHO05D000309 4.9e-25 118.6 89 67.4
BcaB02g11517 Brassica carinata HOM05D007774 ORTHO05D000309 1.2e-23 114.0 93 61.3
BcaB06g26754 Brassica carinata HOM05D007774 ORTHO05D000309 1.2e-23 114.0 93 61.3
BcaB06g27138 Brassica carinata HOM05D007774 ORTHO05D000309 1.2e-23 114.0 93 61.3
BcaB02g11205 Brassica carinata HOM05D007774 ORTHO05D000309 3.5e-23 112.5 89 61.8
BcaB06g26683 Brassica carinata HOM05D007774 ORTHO05D000309 3.5e-23 112.5 89 61.8
BcaB05g24221 Brassica carinata HOM05D007774 ORTHO05D000309 4.6e-23 112.1 84 69.0
BcaC05g26851 Brassica carinata HOM05D007774 ORTHO05D000309 7.8e-23 111.3 89 61.8
BcaC06g36173 Brassica carinata HOM05D007774 ORTHO05D000309 7.8e-23 111.3 93 60.2
BcaC01g02929 Brassica carinata HOM05D007774 ORTHO05D000309 2.3e-22 109.8 93 60.2
BcaC08g43835 Brassica carinata HOM05D007774 ORTHO05D000309 3.9e-22 109.0 93 60.2
BcaB06g26646 Brassica carinata HOM05D007774 ORTHO05D000309 2.5e-21 106.3 93 59.1
BcaB02g11208 Brassica carinata HOM05D007774 ORTHO05D000309 7.3e-21 104.8 93 58.1
BolC2t09377H Brassica oleracea HOM05D007774 ORTHO05D000309 9.5e-21 104.4 91 52.7
BcaB01g02010 Brassica carinata HOM05D007774 ORTHO05D000309 1.6e-20 103.6 90 57.8
BcaB08g35933 Brassica carinata HOM05D007774 ORTHO05D000309 1.6e-20 103.6 90 57.8
BcaNung05585 Brassica carinata HOM05D007774 ORTHO05D000309 1.6e-20 103.6 90 57.8
BcaC03g13868 Brassica carinata HOM05D007774 ORTHO05D000309 4.7e-20 102.1 68 76.5
BcaB04g16980 Brassica carinata HOM05D007774 ORTHO05D000309 1.1e-19 100.9 92 58.7
BcaB07g33250 Brassica carinata HOM05D007774 ORTHO05D000309 1.1e-19 100.9 90 56.7
BraA02t06986Z Brassica rapa HOM05D007774 ORTHO05D000309 1.1e-19 100.9 94 54.3
BcaB06g27901 Brassica carinata HOM05D007774 ORTHO05D000309 1.8e-19 100.1 90 55.6
BcaC02g10455 Brassica carinata HOM05D007774 ORTHO05D000309 4.0e-19 99.0 84 54.8
BcaB01g02175 Brassica carinata HOM05D007774 ORTHO05D000309 5.2e-19 98.6 90 54.4
BcaC09g50600 Brassica carinata HOM05D007774 ORTHO05D000309 2.6e-18 96.3 62 79.0
BcaB06g26508 Brassica carinata HOM05D007774 ORTHO05D000309 4.4e-18 95.5 113 47.8
BcaB03g16083 Brassica carinata HOM05D007774 ORTHO05D000309 9.9e-18 94.4 90 53.3
BolC6t36100H Brassica oleracea HOM05D007774 ORTHO05D000309 9.9e-18 94.4 90 54.4
BcaC06g34090 Brassica carinata HOM05D007774 ORTHO05D000309 1.3e-17 94.0 102 50.0
BcaC08g45193 Brassica carinata HOM05D007774 ORTHO05D000309 2.2e-17 93.2 92 51.1
BcaC01g01743 Brassica carinata HOM05D007774 ORTHO05D000309 4.9e-17 92.0 90 53.3
BcaB03g16006 Brassica carinata HOM05D007774 ORTHO05D000309 1.9e-16 90.1 79 53.2
BcaB06g27506 Brassica carinata HOM05D007774 ORTHO05D000309 1.9e-16 90.1 89 52.8
BraA02t08177Z Brassica rapa HOM05D007774 ORTHO05D000309 2.4e-16 89.7 92 48.9
BcaC02g10529 Brassica carinata HOM05D007774 ORTHO05D000309 3.2e-16 89.4 92 50.0
BcaB07g33982 Brassica carinata HOM05D007774 ORTHO05D000309 7.1e-16 88.2 92 47.8
BcaNung03185 Brassica carinata HOM05D007774 ORTHO05D000309 1.6e-15 87.0 100 50.0
BcaB05g23793 Brassica carinata HOM05D007774 ORTHO05D000309 6.0e-15 85.1 85 56.5
BcaC02g09596 Brassica carinata HOM05D007774 ORTHO05D000309 6.0e-15 85.1 84 47.6
BcaB04g17488 Brassica carinata HOM05D007774 ORTHO05D000309 1.7e-14 83.6 66 69.7
BcaB06g26191 Brassica carinata HOM05D007774 ORTHO05D000309 3.9e-14 82.4 92 45.7
AL8G21820 Arabidopsis lyrata HOM05D007774 ORTHO05D000309 8.6e-14 81.3 81 50.6
A01p38280 Brassica napus HOM05D001038 ORTHO05D000395 1.9e-13 80.1 75 52.0
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 1.9e-13 80.1 88 51.1
BraA09t41073Z Brassica rapa HOM05D007774 ORTHO05D000309 1.9e-13 80.1 75 52.0
BcaB02g11020 Brassica carinata HOM05D007774 ORTHO05D000309 4.3e-13 79.0 91 42.9
BcaC04g20915 Brassica carinata HOM05D007774 ORTHO05D000309 4.3e-13 79.0 93 41.9
BcaC04g22268 Brassica carinata HOM05D007774 ORTHO05D000309 7.3e-13 78.2 84 41.7
BolC6t37988H Brassica oleracea HOM05D007774 ORTHO05D000309 9.6e-13 77.8 62 56.5
AL9U10530 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 2.1e-12 76.6 90 48.9
BolC3t19075H Brassica oleracea HOM05D007774 ORTHO05D000309 2.1e-12 76.6 93 41.9
AL3G46750 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 2.8e-12 76.3 90 48.9
AL8G10620 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 3.6e-12 75.9 90 48.9
AL1G58110 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 4.7e-12 75.5 90 48.9
AL5G19890 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 4.7e-12 75.5 90 48.9
AL5G20070 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 4.7e-12 75.5 90 48.9
BcaB01g02983 Brassica carinata HOM05D007774 ORTHO05D000309 4.7e-12 75.5 102 48.0
AL6G41320 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 6.2e-12 75.1 90 48.9
BcaC04g20923 Brassica carinata HOM05D007774 ORTHO05D000395 6.2e-12 75.1 81 51.9
BcaB05g23917 Brassica carinata HOM05D007774 ORTHO05D000309 8.1e-12 74.7 91 42.9
AL8G20120 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 1.1e-11 74.3 90 47.8
BcaB05g22492 Brassica carinata HOM05D007774 ORTHO05D000309 1.1e-11 74.3 91 39.6
BcaB05g22493 Brassica carinata HOM05D007774 ORTHO05D000309 1.1e-11 74.3 91 39.6
BcaC01g02494 Brassica carinata HOM05D009173 ORTHO05D000309 1.8e-11 73.6 83 47.0
BraA02t07615Z Brassica rapa HOM05D007774 ORTHO05D000309 1.8e-11 73.6 96 43.8
AL4G17480 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 5.2e-11 72.0 70 54.3
BcaC06g36128 Brassica carinata HOM05D007774 ORTHO05D000395 5.2e-11 72.0 83 49.4
C09p37880 Brassica napus HOM05D001038 ORTHO05D000395 5.2e-11 72.0 82 51.2
BolC9t56621H Brassica oleracea HOM05D001038 ORTHO05D000395 5.2e-11 72.0 82 51.2
BcaB08g35546 Brassica carinata HOM05D007774 ORTHO05D000309 6.8e-11 71.6 76 50.0
BolC8t49307H Brassica oleracea HOM05D007774 ORTHO05D000309 3.4e-10 69.3 66 48.5
BcaB03g15195 Brassica carinata HOM05D007774 ORTHO05D000309 4.4e-10 68.9 62 56.5
C07p07480 Brassica napus HOM05D001038 ORTHO05D000395 4.4e-10 68.9 84 48.8
BolC7t41165H Brassica oleracea HOM05D007774 ORTHO05D000309 4.4e-10 68.9 84 48.8
AL3G51240 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 5.8e-10 68.6 90 45.6
BolC8t49310H Brassica oleracea HOM05D007774 ORTHO05D000309 7.6e-10 68.2 94 44.7
AL6G38890 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 9.9e-10 67.8 71 47.9
BcaC08g43001 Brassica carinata HOM05D009173 ORTHO05D000309 9.9e-10 67.8 98 40.8
BcaC01g02366 Brassica carinata HOM05D009173 ORTHO05D000309 1.3e-09 67.4 98 40.8
BolC3t18879H Brassica oleracea HOM05D009173 ORTHO05D000309 1.3e-09 67.4 98 40.8
AL3G51480 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 1.7e-09 67.0 79 48.1
BcaB03g15304 Brassica carinata HOM05D007774 ORTHO05D000309 1.7e-09 67.0 62 48.4
BcaC08g46090 Brassica carinata HOM05D007774 ORTHO05D000309 1.7e-09 67.0 62 48.4
AL3G12590 Arabidopsis lyrata HOM05D010286 ORTHO05D012603 2.2e-09 66.6 81 46.9
BcaB03g15391 Brassica carinata HOM05D009173 ORTHO05D000309 2.9e-09 66.2 74 45.9
AL4G18060 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 3.8e-09 65.9 72 48.6
BcaC04g20956 Brassica carinata HOM05D008073 ORTHO05D000309 3.8e-09 65.9 78 39.7
BolC9t56587H Brassica oleracea HOM05D008073 ORTHO05D000309 3.8e-09 65.9 78 39.7
BraA09t38926Z Brassica rapa HOM05D009173 ORTHO05D000309 3.8e-09 65.9 93 40.9
BcaC07g38082 Brassica carinata HOM05D009173 ORTHO05D000309 6.4e-09 65.1 81 43.2
Sp5g12640 Schrenkiella parvula HOM05D009173 ORTHO05D000309 8.4e-09 64.7 74 47.3
BcaB05g24217 Brassica carinata HOM05D007774 ORTHO05D000309 1.1e-08 64.3 63 47.6
C09p37560 Brassica napus HOM05D008073 ORTHO05D000309 1.1e-08 64.3 85 38.8
C08p07520 Brassica napus HOM05D007774 ORTHO05D000309 1.4e-08 63.9 64 46.9
BcaB08g36585 Brassica carinata HOM05D007774 ORTHO05D000309 1.9e-08 63.5 92 39.1
BcaC06g35818 Brassica carinata HOM05D007774 ORTHO05D000309 2.4e-08 63.2 93 39.8
AL1G56990 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 3.2e-08 62.8 76 46.1
BcaC06g36745 Brassica carinata HOM05D008073 ORTHO05D031794 4.2e-08 62.4 79 39.2
AL3G40990 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 5.4e-08 62.0 76 42.1
AL6G49470 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 5.4e-08 62.0 76 42.1
BcaB02g11187 Brassica carinata HOM05D007774 ORTHO05D000309 1.6e-07 60.5 46 56.5
BcaB02g11450 Brassica carinata HOM05D007774 ORTHO05D000309 2.1e-07 60.1 92 40.2
BcaC02g09058 Brassica carinata HOM05D007774 ORTHO05D000309 2.7e-07 59.7 115 40.9
Hma1.2p1_0048F.1_g028060 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.7e-07 59.7 90 37.8
Hma1.2p1_1389F.1_g280030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.7e-07 59.7 90 37.8
AL2G19320 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 3.5e-07 59.3 65 49.2
BolC2t07487H Brassica oleracea HOM05D007774 ORTHO05D000309 3.5e-07 59.3 68 44.1
BolC3t20214H Brassica oleracea HOM05D007774 ORTHO05D000309 3.5e-07 59.3 68 44.1
BolC5t31047H Brassica oleracea HOM05D007774 ORTHO05D000309 3.5e-07 59.3 68 44.1
Sp5g10600 Schrenkiella parvula HOM05D009173 ORTHO05D000309 3.5e-07 59.3 81 44.4
BcaB01g01569 Brassica carinata HOM05D009173 ORTHO05D000309 4.6e-07 58.9 75 42.7
BcaC01g04381 Brassica carinata HOM05D007774 ORTHO05D000309 4.6e-07 58.9 73 47.9
BcaC04g23317 Brassica carinata HOM05D009173 ORTHO05D000309 4.6e-07 58.9 78 42.3
BcaB01g00830 Brassica carinata HOM05D008073 ORTHO05D000309 6.0e-07 58.5 77 40.3
Carub.0008s0717 Capsella rubella HOM05D010286 ORTHO05D000309 6.0e-07 58.5 82 40.2
BcaC05g25280 Brassica carinata HOM05D008073 ORTHO05D000309 1.0e-06 57.8 78 41.0
AT1G67235 Arabidopsis thaliana HOM05D008073 ORTHO05D000309 2.3e-06 56.6 68 44.1
Carub.0007s3110 Capsella rubella HOM05D010286 ORTHO05D000309 2.3e-06 56.6 88 38.6
BolC5t33238H Brassica oleracea HOM05D007774 ORTHO05D000309 3.9e-06 55.8 55 43.6
C04p28730 Brassica napus HOM05D007774 ORTHO05D000309 5.1e-06 55.5 39 61.5
BcaB04g19293 Brassica carinata HOM05D008073 ORTHO05D000309 6.6e-06 55.1 77 40.3
C06p11380 Brassica napus HOM05D009173 ORTHO05D027589 6.6e-06 55.1 81 40.7


User provided reference genes

Program Settings