Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g26470 Brassica carinata HOM05D006411 ORTHO05D007563 1.4e-125 453.0 226 100.0
Sp3g20930 Schrenkiella parvula HOM05D006411 ORTHO05D007563 1.5e-111 406.4 225 88.0
A07p09200 Brassica napus HOM05D006411 ORTHO05D007563 4.3e-111 404.8 229 90.8
C07p14190 Brassica napus HOM05D006411 ORTHO05D007563 5.6e-111 404.4 226 89.4
BraA07t28715Z Brassica rapa HOM05D006411 ORTHO05D007563 9.5e-111 403.7 227 90.7
BolC7t41915H Brassica oleracea HOM05D006411 ORTHO05D007563 6.1e-110 401.0 224 89.3
Thhalv10021467m.g Eutrema salsugineum HOM05D006411 ORTHO05D007563 1.2e-105 386.7 226 85.8
AL3G37910 Arabidopsis lyrata HOM05D006411 ORTHO05D007563 1.2e-100 370.2 227 81.9
AT3G23255 Arabidopsis thaliana HOM05D006411 ORTHO05D007563 1.3e-99 366.7 227 81.5
Aa31LG8G9800 Aethionema arabicum HOM05D006411 ORTHO05D007563 1.2e-97 360.1 228 78.1
Carub.0003s2350 Capsella rubella HOM05D006411 ORTHO05D007563 1.2e-92 343.6 227 76.2
THA.LOC104808624 Tarenaya hassleriana HOM05D006411 ORTHO05D007563 2.1e-86 322.8 228 71.1
CARHR099210 Cardamine hirsuta HOM05D006411 ORTHO05D007563 1.1e-79 300.4 195 76.9
Atru.chr12.1401 Acer truncatum HOM05D006411 ORTHO05D007563 8.7e-72 274.2 232 61.6
TWI18G1006 Tripterygium wilfordii HOM05D006411 ORTHO05D007563 2.1e-70 269.6 234 59.0
Haze_12492 Corylus avellana HOM05D006411 ORTHO05D007563 3.6e-70 268.9 232 60.8
QL03p049668 Quercus lobata HOM05D006411 ORTHO05D007563 3.6e-70 268.9 238 58.8
Duzib132G0393 Durio zibethinus HOM05D006411 ORTHO05D007563 8.1e-70 267.7 234 59.4
Cfa009441 Carpinus fangiana HOM05D006411 ORTHO05D007563 9.0e-69 264.2 231 59.7
Dinv09212 Davidia involucrata HOM05D006411 ORTHO05D007563 1.5e-68 263.5 232 58.6
TAR371G0942 Trochodendron aralioides HOM05D006411 ORTHO05D007563 2.0e-68 263.1 236 59.3
Solyc12g016210.2 Solanum lycopersicum HOM05D006411 ORTHO05D007563 4.5e-68 261.9 209 61.7
Sopen12g008000 Solanum pennellii HOM05D006411 ORTHO05D007563 4.5e-68 261.9 209 61.7
GSVIVG01004943001 Vitis vinifera HOM05D006411 ORTHO05D007563 4.5e-68 261.9 234 58.5
Carub.0137s0001 Capsella rubella HOM05D006411 ORTHO05D007563 9.9e-68 260.8 169 76.9
Manes.09G187200 Manihot esculenta HOM05D006411 ORTHO05D007563 1.7e-67 260.0 220 61.8
Gohir.A01G141100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 1.9e-66 256.5 236 58.1
Sabra03G0118900 Salix brachista HOM05D006411 ORTHO05D007563 5.5e-66 255.0 209 61.2
Thecc.02G193900 Theobroma cacao HOM05D006411 ORTHO05D007563 7.1e-66 254.6 203 64.5
CAN.G529.4 Capsicum annuum HOM05D006411 ORTHO05D007563 2.1e-65 253.1 229 55.9
Nn1g07843 Nelumbo nucifera HOM05D006411 ORTHO05D007563 2.1e-65 253.1 243 57.6
Gorai.002G163700 Gossypium raimondii HOM05D006411 ORTHO05D007563 2.7e-65 252.7 236 57.6
RhsimUnG0101400 Rhododendron simsii HOM05D006411 ORTHO05D007563 2.7e-65 252.7 211 60.7
SalBow2G2156 Salvia bowleyana HOM05D006411 ORTHO05D007563 3.5e-65 252.3 233 55.4
MD16G1129800 Malus domestica HOM05D006411 ORTHO05D007563 4.6e-65 251.9 231 56.3
Prupe.1G216800 Prunus persica HOM05D006411 ORTHO05D007563 4.6e-65 251.9 232 55.2
SalBow7G1895 Salvia bowleyana HOM05D006411 ORTHO05D007563 6.0e-65 251.5 235 54.9
Migut.K01066 Erythranthe guttata HOM05D006411 ORTHO05D007563 7.9e-65 251.1 229 58.5
Actinidia09598 Actinidia chinensis HOM05D006411 ORTHO05D007563 1.0e-64 250.8 209 60.3
Nn3g20757 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.0e-64 249.2 219 59.8
Oeu044509.2 Olea europaea HOM05D006411 ORTHO05D007563 6.7e-64 248.1 231 54.5
Lj3g0004314 Lotus japonicus HOM05D006411 ORTHO05D007563 1.1e-63 247.3 220 59.5
MD13G1129600 Malus domestica HOM05D006411 ORTHO05D007563 3.3e-63 245.7 214 57.0
CANSAT01G2250 Cannabis sativa HOM05D006411 ORTHO05D007563 1.3e-62 243.8 211 59.7
Lsat_1_v5_gn_2_17720 Lactuca sativa HOM05D006411 ORTHO05D007563 1.3e-62 243.8 229 52.8
RcHm_v2.0_Chr4g0429021 Rosa chinensis HOM05D006411 ORTHO05D007563 1.3e-62 243.8 230 54.8
FAN17G2521 Fragaria x ananassa HOM05D006411 ORTHO05D007563 1.6e-62 243.4 230 54.8
Glyma.11G109300 Glycine max HOM05D006411 ORTHO05D007563 1.6e-62 243.4 216 59.7
FvH4_4g22791 Fragaria vesca HOM05D006411 ORTHO05D007563 2.1e-62 243.0 230 54.8
MSTRG.461 Avicennia marina HOM05D006411 ORTHO05D007563 4.8e-62 241.9 231 54.1
Aqoxy5G03164 Aquilegia oxysepala HOM05D006411 ORTHO05D007563 6.2e-62 241.5 212 57.1
Ah.03g135590 Amaranthus hybridus HOM05D006411 ORTHO05D007563 8.1e-62 241.1 214 58.9
Sed0009782 Sechium edule HOM05D006411 ORTHO05D007563 1.4e-61 240.4 209 56.9
SGA_v2.0_scaffold80G25942 Striga asiatica HOM05D006411 ORTHO05D007563 1.8e-61 240.0 232 53.9
Os10g0466100 Oryza sativa ssp. japonica HOM05D006411 ORTHO05D007563 2.4e-61 239.6 233 54.9
CsaV3_6G007790 Cucumis sativus L. HOM05D006411 ORTHO05D007563 3.1e-61 239.2 209 56.0
FAN12G0338 Fragaria x ananassa HOM05D002780 ORTHO05D003254 3.1e-61 239.2 214 56.1
Ciclev10005785m.g Citrus clementina HOM05D006411 ORTHO05D007563 5.3e-61 238.4 212 59.0
Psat7g169880 Pisum sativum HOM05D006411 ORTHO05D007563 9.0e-61 237.7 233 56.7
Zm00001eb222220 Zea mays HOM05D006411 ORTHO05D007563 9.0e-61 237.7 230 55.7
VMungo1127G0609 Vigna mungo HOM05D006411 ORTHO05D007563 1.2e-60 237.3 215 59.5
EL10Ac6g13598 Beta vulgaris HOM05D006411 ORTHO05D007563 2.0e-60 236.5 246 53.3
CSS0035608 Camellia sinensis var. sinensis HOM05D006411 ORTHO05D007563 2.6e-60 236.1 237 54.9
TPR.G28023 Trifolium pratense HOM05D006411 ORTHO05D007563 2.6e-60 236.1 248 52.8
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 3.4e-60 235.7 236 53.4
AUR62031618 Chenopodium quinoa HOM05D006411 ORTHO05D007563 2.9e-59 232.6 245 53.9
HanXRQChr17g0559141 Helianthus annuus HOM05D006411 ORTHO05D007563 3.2e-58 229.2 228 52.2
Nitab4.5_0003020g0130 Nicotiana tabacum HOM05D006411 ORTHO05D007563 7.1e-58 228.0 213 55.4
Ca_18949_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 2.1e-57 226.5 208 57.7
Ca_29765_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 2.1e-57 226.5 208 57.7
Cc11_g15120 Coffea canephora HOM05D006411 ORTHO05D007563 1.3e-56 223.8 215 53.0
Hund06130 Selenicereus undatus HOM05D006411 ORTHO05D007563 1.8e-56 223.4 259 50.2
PSO349G0017 Papaver somniferum HOM05D006411 ORTHO05D007563 3.0e-56 222.6 278 46.0
Sc11g0000150 Simmondsia chinensis HOM05D006411 ORTHO05D007563 8.7e-56 221.1 194 59.3
PSO765G0094 Papaver somniferum HOM05D006411 ORTHO05D007563 1.5e-55 220.3 281 46.3
SHI04127 Sapria himalayana HOM05D006411 ORTHO05D007563 4.3e-55 218.8 216 53.2
Actinidia34001 Actinidia chinensis HOM05D006411 ORTHO05D007563 7.4e-55 218.0 179 59.8
ATR0751G011 Amborella trichopoda HOM05D006411 ORTHO05D006707 3.7e-54 215.7 232 50.9
Lalb_Chr19g0140051 Lupinus albus HOM05D006411 ORTHO05D007563 1.8e-53 213.4 220 53.2
ECA238G0094 Erigeron canadensis HOM05D006411 ORTHO05D007563 1.5e-52 210.3 218 50.0
PGR119G0335 Punica granatum HOM05D006411 ORTHO05D007563 5.8e-52 208.4 211 56.4
HPP92_007040 Vanilla planifolia HOM05D006411 ORTHO05D007563 7.6e-52 208.0 237 49.4
SEGI_29411 Sequoiadendron giganteum HOM05D006411 ORTHO05D007563 1.3e-51 207.2 214 49.1
Gohir.D01G132100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 6.5e-51 204.9 185 57.8
arahy.Tifrunner.gnm1.ann1.ZM7ZD1 Arachis hypogaea HOM05D006411 ORTHO05D007563 3.2e-50 202.6 208 55.8
Phvul.011G018400 Phaseolus vulgaris HOM05D006411 ORTHO05D007563 1.8e-48 196.8 155 65.8
CiPaw.05G102200 Carya illinoinensis HOM05D006411 ORTHO05D007563 1.9e-47 193.4 232 49.1
vmacro10313 Vaccinium macrocarpon HOM05D006411 ORTHO05D007563 9.7e-47 191.0 170 59.4
ClCG06G001760 Citrullus lanatus HOM05D006411 ORTHO05D007563 7.7e-44 181.4 174 52.9
Nn2g15361 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.3e-43 180.6 169 56.8
MELO3C022353.2 Cucumis melo HOM05D006411 ORTHO05D007563 2.9e-43 179.5 192 50.0
Medtr4g078190 Medicago truncatula HOM05D006411 ORTHO05D007563 2.1e-41 173.3 140 63.6
Pp3c2_21820 Physcomitrium patens HOM05D006411 ORTHO05D007563 4.6e-41 172.2 202 43.1
Potri.003G163500 Populus trichocarpa HOM05D006411 ORTHO05D007563 3.9e-40 169.1 147 55.1
CBR_g41204 Chara braunii HOM05D006411 ORTHO05D007563 8.8e-40 167.9 213 44.6
Nn3g17917 Nelumbo nucifera HOM05D006411 ORTHO05D007563 8.8e-40 167.9 163 54.6
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 3.3e-39 166.0 205 46.8
Mapoly0164s0017 Marchantia polymorpha HOM05D006411 ORTHO05D007563 3.1e-37 159.5 200 43.0
COL.COLO4_21790 Corchorus olitorius HOM05D006411 ORTHO05D007563 2.6e-36 156.4 230 42.6
AagrBONN_evm.TU.Sc2ySwM_344.2329 Anthoceros agrestis HOM05D014047 ORTHO05D007563 1.0e-35 154.5 198 46.5
AUR62010749 Chenopodium quinoa HOM05D006411 ORTHO05D007563 1.1e-34 151.0 146 56.8
AUR62020519 Chenopodium quinoa HOM05D006411 ORTHO05D007563 3.6e-33 146.0 141 57.4
Lj5g0007299 Lotus japonicus HOM05D006411 ORTHO05D007563 1.7e-30 137.1 160 51.9
FvH4_4g07260 Fragaria vesca HOM05D006411 ORTHO05D007563 4.4e-23 112.5 131 45.8
SHI32270 Sapria himalayana HOM05D006411 ORTHO05D007563 1.9e-18 97.1 140 45.0
SMO119G0262 Selaginella moellendorffii HOM05D006411 ORTHO05D007563 1.4e-16 90.9 155 35.5
Nn7g35834 Nelumbo nucifera HOM05D006411 ORTHO05D007563 8.8e-16 88.2 81 59.3
MCO06G175 Micromonas commoda HOM05D006411 ORTHO05D007563 4.4e-15 85.9 199 33.7
Dinv15386 Davidia involucrata HOM05D006411 ORTHO05D007563 1.3e-14 84.3 55 63.6
Nn7g35833 Nelumbo nucifera HOM05D006411 ORTHO05D007563 4.1e-13 79.3 57 70.2
AUR62015683 Chenopodium quinoa HOM05D006411 ORTHO05D007563 7.0e-13 78.6 69 56.5
SGA_v2.0_scaffold360G49865 Striga asiatica HOM05D020805 ORTHO05D007563 1.9e-10 70.5 71 50.7
Nn2g15434 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.0e-08 63.2 177 35.0
Peaxi162Scf00217g00911 Petunia axillaris HOM05D006411 ORTHO05D007563 5.2e-08 62.4 148 29.7
Glyma.12G016051 Glycine max HOM05D006411 ORTHO05D007563 1.2e-07 61.2 96 40.6
MBI02_g46060_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 9.8e-07 58.2 37 59.5
MBI05_g34743_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 9.8e-07 58.2 56 46.4
PRCOL_00001528 Prasinoderma coloniale HOM05D006411 ORTHO05D007563 1.3e-06 57.8 153 32.7
MBI04_g21533_MAGBIO Magnolia biondii HOM05D006411 ORTHO05D007563 4.9e-06 55.8 36 58.3


User provided reference genes

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