Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g26300 Brassica carinata HOM05D000843 ORTHO05D000698 5.6e-36 153.7 74 100.0
BcaB05g24811 Brassica carinata HOM05D000843 ORTHO05D000698 2.5e-28 128.3 76 85.5
C02p31400 Brassica napus HOM05D000843 ORTHO05D000698 8.4e-24 113.2 79 78.5
Thhalv10018327m.g Eutrema salsugineum HOM05D000843 ORTHO05D000698 2.8e-19 98.2 80 68.8
BcaB03g15726 Brassica carinata HOM05D000843 ORTHO05D000698 3.6e-19 97.8 84 71.4
A02p18870 Brassica napus HOM05D000843 ORTHO05D000698 1.1e-18 96.3 76 72.4
BraA02t06931Z Brassica rapa HOM05D000843 ORTHO05D000698 1.1e-18 96.3 76 72.4
BolC6t39823H Brassica oleracea HOM05D000843 ORTHO05D000698 4.5e-17 90.9 83 66.3
Sp5g28920 Schrenkiella parvula HOM05D000843 ORTHO05D000698 7.6e-17 90.1 77 72.7
BcaB03g15079 Brassica carinata HOM05D000843 ORTHO05D000698 9.9e-17 89.7 82 67.1
A07p39590 Brassica napus HOM05D000843 ORTHO05D000698 9.9e-17 89.7 83 65.1
BraA07t31508Z Brassica rapa HOM05D000843 ORTHO05D000698 9.9e-17 89.7 83 65.1
C06p47880 Brassica napus HOM05D000843 ORTHO05D000698 1.3e-16 89.4 83 65.1
BcaC08g45624 Brassica carinata HOM05D000843 ORTHO05D000698 1.1e-15 86.3 82 65.9
BraA07t30609Z Brassica rapa HOM05D000843 ORTHO05D000698 1.1e-15 86.3 82 65.9
C06p33870 Brassica napus HOM05D000843 ORTHO05D000698 1.9e-15 85.5 82 65.9
BolC6t38500H Brassica oleracea HOM05D000843 ORTHO05D000698 1.9e-15 85.5 82 65.9
A07p29690 Brassica napus HOM05D000843 ORTHO05D000698 4.2e-15 84.3 82 64.6
BcaC08g46794 Brassica carinata HOM05D000843 ORTHO05D000698 7.9e-14 80.1 70 71.4
Carub.0002s2048 Capsella rubella HOM05D000843 ORTHO05D000698 1.8e-13 79.0 82 59.8
BcaC03g15454 Brassica carinata HOM05D000843 ORTHO05D000698 8.7e-13 76.6 54 74.1
CARHR066800 Cardamine hirsuta HOM05D000843 ORTHO05D000698 2.8e-11 71.6 81 61.7
BcaC03g15451 Brassica carinata HOM05D000746 ORTHO05D000573 1.4e-10 69.3 46 78.3
Aa31LG4G4060 Aethionema arabicum HOM05D000843 ORTHO05D000698 2.0e-09 65.5 84 56.0
AL2G33530 Arabidopsis lyrata HOM05D000843 ORTHO05D000698 4.6e-06 54.3 73 52.1


User provided reference genes

Program Settings