Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23045 Brassica carinata HOM05D008277 ORTHO05D093753 2.2e-169 599.0 327 100.0
BcaB04g17639 Brassica carinata HOM05D008277 ORTHO05D011446 1.7e-76 290.4 289 60.6
BcaB08g35381 Brassica carinata HOM05D004489 ORTHO05D091739 3.7e-55 219.5 227 68.3
BcaB08g35275 Brassica carinata HOM05D004489 ORTHO05D093088 3.8e-52 209.5 256 57.8
BcaC05g27188 Brassica carinata HOM05D008277 ORTHO05D011446 3.2e-51 206.5 153 64.1
BcaB02g10530 Brassica carinata HOM05D008277 ORTHO05D011446 2.8e-47 193.4 156 63.5
C07p01670 Brassica napus HOM05D008277 ORTHO05D018788 5.9e-45 185.7 141 62.4
BcaB04g17396 Brassica carinata HOM05D004489 ORTHO05D095687 1.0e-44 184.9 168 79.2
BraA01t02693Z Brassica rapa HOM05D008277 ORTHO05D011446 8.5e-44 181.8 147 59.9
BcaB06g26545 Brassica carinata HOM05D004489 ORTHO05D095075 1.4e-43 181.0 168 67.3
BcaB06g27095 Brassica carinata HOM05D004489 ORTHO05D095035 1.9e-43 180.6 263 54.0
BcaC07g38867 Brassica carinata HOM05D008277 ORTHO05D011446 4.2e-43 179.5 143 60.8
C02p24700 Brassica napus HOM05D004489 ORTHO05D098125 4.2e-43 179.5 293 44.7
BNapus_Darmor_BZH_scaffold_103p00040 Brassica napus HOM05D008277 ORTHO05D011446 9.4e-43 178.3 152 57.9
BNapus_Darmor_BZH_scaffold_104p00040 Brassica napus HOM05D008277 ORTHO05D011446 9.4e-43 178.3 152 57.9
BraA04t16626Z Brassica rapa HOM05D008277 ORTHO05D011446 2.7e-42 176.8 164 53.7
A05p29650 Brassica napus HOM05D008277 ORTHO05D011446 2.3e-41 173.7 154 55.2
A01p27640 Brassica napus HOM05D008277 ORTHO05D011446 2.6e-40 170.2 164 52.4
BraA01t02902Z Brassica rapa HOM05D008277 ORTHO05D011446 2.6e-40 170.2 164 52.4
BraA05t21322Z Brassica rapa HOM05D008277 ORTHO05D011446 5.7e-40 169.1 151 55.0
BcaB02g10531 Brassica carinata HOM05D004489 ORTHO05D094500 2.2e-39 167.2 164 70.1
BraA07t28336Z Brassica rapa HOM05D004489 ORTHO05D018788 2.8e-39 166.8 330 37.9
A03p67720 Brassica napus HOM05D008277 ORTHO05D011446 3.5e-37 159.8 160 51.9
BcaB01g01689 Brassica carinata HOM05D004489 ORTHO05D095684 5.9e-37 159.1 144 81.2
A03p66470 Brassica napus HOM05D008277 ORTHO05D011446 1.9e-35 154.1 160 51.2
C04p13480 Brassica napus HOM05D008277 ORTHO05D011446 1.9e-35 154.1 160 51.2
A04p09680 Brassica napus HOM05D008277 ORTHO05D011446 1.2e-34 151.4 160 50.6
BraA03t14602Z Brassica rapa HOM05D008277 ORTHO05D011446 1.2e-34 151.4 131 57.3
BcaC07g38322 Brassica carinata HOM05D008277 ORTHO05D011446 4.7e-34 149.4 157 51.0
BcaB04g17006 Brassica carinata HOM05D004489 ORTHO05D092589 2.0e-32 144.1 231 54.1
BcaB05g24918 Brassica carinata HOM05D004489 ORTHO05D092070 3.3e-32 143.3 256 46.5
BcaB03g16202 Brassica carinata HOM05D004489 ORTHO05D093905 9.7e-32 141.7 110 74.5
BcaB08g35276 Brassica carinata HOM05D008277 ORTHO05D091063 8.2e-31 138.7 173 49.7
C08p08580 Brassica napus HOM05D004489 ORTHO05D010056 2.6e-29 133.7 215 51.2
C09p41300 Brassica napus HOM05D004489 ORTHO05D010056 1.0e-28 131.7 218 48.6
BcaC07g38382 Brassica carinata HOM05D004489 ORTHO05D010056 3.8e-28 129.8 332 38.6
C07p03810 Brassica napus HOM05D004489 ORTHO05D010056 5.0e-28 129.4 234 45.7
BolC7t40773H Brassica oleracea HOM05D004489 ORTHO05D010056 6.5e-28 129.0 234 45.7
BolC9t55268H Brassica oleracea HOM05D004489 ORTHO05D010056 8.5e-28 128.6 224 46.0
BcaC07g37389 Brassica carinata HOM05D004489 ORTHO05D010056 1.1e-27 128.3 227 48.5
BcaC04g20631 Brassica carinata HOM05D004489 ORTHO05D010056 4.2e-27 126.3 166 54.2
C07p01860 Brassica napus HOM05D004489 ORTHO05D010056 1.2e-26 124.8 218 44.5
BcaC04g22309 Brassica carinata HOM05D004489 ORTHO05D010056 2.1e-26 124.0 205 46.8
BcaC07g37478 Brassica carinata HOM05D004489 ORTHO05D010056 2.3e-25 120.6 169 51.5
BcaC04g22095 Brassica carinata HOM05D004489 ORTHO05D000493 3.0e-25 120.2 278 39.6
C09p20870 Brassica napus HOM05D004489 ORTHO05D010056 3.0e-25 120.2 215 44.7
BolC9t54984H Brassica oleracea HOM05D004489 ORTHO05D010056 3.0e-25 120.2 215 44.7
BraA07t28379Z Brassica rapa HOM05D008277 ORTHO05D011446 5.2e-25 119.4 114 55.3
BcaC02g11524 Brassica carinata HOM05D004489 ORTHO05D010056 8.8e-25 118.6 208 47.6
BcaC09g51020 Brassica carinata HOM05D004489 ORTHO05D010056 1.2e-24 118.2 161 52.8
BcaC05g28262 Brassica carinata HOM05D004489 ORTHO05D010056 1.5e-24 117.9 168 51.2
BraA03t15700Z Brassica rapa HOM05D008277 ORTHO05D011446 3.4e-24 116.7 109 56.0
C05p52380 Brassica napus HOM05D004489 ORTHO05D010056 5.7e-24 115.9 223 44.4
BcaC09g51560 Brassica carinata HOM05D004489 ORTHO05D010056 1.3e-23 114.8 248 40.3
BcaB03g16158 Brassica carinata HOM05D004489 ORTHO05D091594 1.4e-22 111.3 91 81.3
BcaC05g29022 Brassica carinata HOM05D004489 ORTHO05D010056 1.8e-22 110.9 166 50.0
BolC8t47699H Brassica oleracea HOM05D004489 ORTHO05D010056 2.4e-22 110.5 168 53.0
BcaC04g18700 Brassica carinata HOM05D004489 ORTHO05D010056 4.1e-22 109.8 210 47.6
BcaC08g45661 Brassica carinata HOM05D004489 ORTHO05D010056 7.0e-22 109.0 168 48.2
BolC7t42863H Brassica oleracea HOM05D004489 ORTHO05D010056 7.0e-22 109.0 201 45.8
BcaC03g16680 Brassica carinata HOM05D004489 ORTHO05D010056 1.2e-21 108.2 168 50.6
C07p23290 Brassica napus HOM05D004489 ORTHO05D010056 2.0e-21 107.5 201 45.3
BcaC03g15256 Brassica carinata HOM05D004489 ORTHO05D010056 4.5e-21 106.3 260 36.5
BolC2t08562H Brassica oleracea HOM05D004489 ORTHO05D010056 1.7e-20 104.4 240 40.4
BcaNung03342 Brassica carinata HOM05D004489 ORTHO05D010056 6.5e-20 102.4 164 48.2
BcaC04g22798 Brassica carinata HOM05D004489 ORTHO05D010056 3.2e-19 100.1 348 29.6
C02p47420 Brassica napus HOM05D004489 ORTHO05D010056 4.2e-19 99.8 122 55.7
BcaC01g00378 Brassica carinata HOM05D004489 ORTHO05D010056 5.5e-19 99.4 122 54.1
BcaC06g36646 Brassica carinata HOM05D004489 ORTHO05D010056 7.2e-19 99.0 122 54.9
BolC1t01193H Brassica oleracea HOM05D004489 ORTHO05D010056 2.1e-18 97.4 126 52.4
BcaC01g01829 Brassica carinata HOM05D004489 ORTHO05D010056 1.0e-17 95.1 122 54.1
BcaC02g10072 Brassica carinata HOM05D004489 ORTHO05D090663 1.8e-17 94.4 168 47.0
C09p34080 Brassica napus HOM05D004489 ORTHO05D010056 2.3e-17 94.0 167 49.7
BolC9t56245H Brassica oleracea HOM05D004489 ORTHO05D010056 2.3e-17 94.0 167 49.7
C03p64090 Brassica napus HOM05D004489 ORTHO05D010056 4.0e-17 93.2 188 42.6
BolC2t10703H Brassica oleracea HOM05D004489 ORTHO05D027759 4.0e-17 93.2 169 44.4
BraA05t20820Z Brassica rapa HOM05D004489 ORTHO05D027759 4.0e-17 93.2 125 52.0
BcaB04g17769 Brassica carinata HOM05D004489 ORTHO05D096269 5.2e-17 92.8 167 52.1
BolC3t18663H Brassica oleracea HOM05D004489 ORTHO05D010056 5.2e-17 92.8 187 42.8
BcaC03g16777 Brassica carinata HOM05D004489 ORTHO05D027759 1.5e-16 91.3 164 44.5
C07p20720 Brassica napus HOM05D004489 ORTHO05D010056 1.5e-16 91.3 168 50.0
BcaC03g14954 Brassica carinata HOM05D004489 ORTHO05D010056 2.0e-16 90.9 122 52.5
C01p35260 Brassica napus HOM05D004489 ORTHO05D010056 2.0e-16 90.9 168 50.6
BolC1t03483H Brassica oleracea HOM05D004489 ORTHO05D010056 2.0e-16 90.9 168 50.6
A05p19170 Brassica napus HOM05D004489 ORTHO05D027759 1.7e-15 87.8 125 49.6
BcaC06g36060 Brassica carinata HOM05D004489 ORTHO05D092528 8.3e-15 85.5 93 59.1
BcaC04g20961 Brassica carinata HOM05D004489 ORTHO05D032456 3.1e-14 83.6 161 43.5
A06p23470 Brassica napus HOM05D004489 ORTHO05D010056 4.1e-14 83.2 167 46.7
C01p35220 Brassica napus HOM05D004489 ORTHO05D010056 9.1e-14 82.0 144 47.2
BcaC04g20751 Brassica carinata HOM05D004489 ORTHO05D010056 1.2e-13 81.6 162 45.1
BcaC02g07770 Brassica carinata HOM05D004489 ORTHO05D010056 1.6e-13 81.3 100 55.0
BcaB01g01214 Brassica carinata HOM05D004489 ORTHO05D000740 2.7e-13 80.5 168 40.5
BcaC07g38503 Brassica carinata HOM05D004489 ORTHO05D010056 4.5e-13 79.7 118 48.3
BolC3t18662H Brassica oleracea HOM05D008277 ORTHO05D028234 4.5e-13 79.7 40 82.5
BraA10t42927Z Brassica rapa HOM05D008277 ORTHO05D011446 4.5e-13 79.7 85 51.8
BcaC01g02602 Brassica carinata HOM05D008277 ORTHO05D011446 5.9e-13 79.3 74 52.7
BraA08t32901Z Brassica rapa HOM05D008277 ORTHO05D011446 7.7e-13 79.0 85 51.8
A09p17520 Brassica napus HOM05D008277 ORTHO05D011446 2.3e-12 77.4 85 50.6
C06p10210 Brassica napus HOM05D004489 ORTHO05D010056 2.3e-12 77.4 167 41.3
BcaC08g44976 Brassica carinata HOM05D004489 ORTHO05D010056 6.6e-12 75.9 125 54.4
BraA07t28410Z Brassica rapa HOM05D008277 ORTHO05D011446 8.6e-12 75.5 80 52.5
BraA05t21198Z Brassica rapa HOM05D008277 ORTHO05D011446 1.5e-11 74.7 89 48.3
C09p37510 Brassica napus HOM05D004489 ORTHO05D032456 1.9e-11 74.3 201 37.8
BolC9t56581H Brassica oleracea HOM05D004489 ORTHO05D032456 1.9e-11 74.3 201 37.8
C05p26780 Brassica napus HOM05D004489 ORTHO05D010056 2.5e-11 73.9 119 47.9
BcaB07g33270 Brassica carinata HOM05D000888 ORTHO05D000740 4.2e-11 73.2 250 33.2
BraA09t38682Z Brassica rapa HOM05D008277 ORTHO05D011446 4.2e-11 73.2 83 49.4
BcaB03g16167 Brassica carinata HOM05D004489 ORTHO05D091635 5.6e-11 72.8 169 40.2
BcaC04g21271 Brassica carinata HOM05D004489 ORTHO05D039740 5.6e-11 72.8 181 38.7
BolC8t47152H Brassica oleracea HOM05D008277 ORTHO05D028234 7.2e-11 72.4 37 81.1
BcaB01g01502 Brassica carinata HOM05D004489 ORTHO05D094885 9.5e-11 72.0 102 51.0
BcaB07g33397 Brassica carinata HOM05D004489 ORTHO05D000740 2.1e-10 70.9 169 39.1
A01p28050 Brassica napus HOM05D008277 ORTHO05D028234 2.1e-10 70.9 37 81.1
BcaC09g48389 Brassica carinata HOM05D004489 ORTHO05D010056 2.8e-10 70.5 117 47.0
C09p39590 Brassica napus HOM05D004489 ORTHO05D010056 2.8e-10 70.5 213 39.0
C01p30160 Brassica napus HOM05D004489 ORTHO05D010056 3.6e-10 70.1 124 50.8
A05p21690 Brassica napus HOM05D004489 ORTHO05D100974 8.0e-10 68.9 177 41.8
BolC7t42604H Brassica oleracea HOM05D004489 ORTHO05D010056 8.0e-10 68.9 125 51.2
C08p18050 Brassica napus HOM05D004489 ORTHO05D021897 1.4e-09 68.2 217 38.7
BolC5t30898H Brassica oleracea HOM05D004489 ORTHO05D010056 1.4e-09 68.2 103 48.5
BolC8t49437H Brassica oleracea HOM05D004489 ORTHO05D021897 1.4e-09 68.2 217 38.7
C05p22010 Brassica napus HOM05D004489 ORTHO05D010056 2.3e-09 67.4 97 46.4
BolC8t47151H Brassica oleracea HOM05D004489 ORTHO05D010056 4.0e-09 66.6 205 39.5
C02p57490 Brassica napus HOM05D004489 ORTHO05D010056 5.2e-09 66.2 123 51.2
BcaB03g16455 Brassica carinata HOM05D004489 ORTHO05D005643 8.9e-09 65.5 186 37.1
C06p25970 Brassica napus HOM05D004489 ORTHO05D021897 3.4e-08 63.5 219 37.0
BcaC04g19493 Brassica carinata HOM05D004489 ORTHO05D010056 5.7e-08 62.8 123 50.4
BraA04t16648Z Brassica rapa HOM05D004489 ORTHO05D018788 1.7e-07 61.2 89 58.4
C02p21030 Brassica napus HOM05D004489 ORTHO05D010056 2.9e-07 60.5 119 44.5
BraA03t15298Z Brassica rapa HOM05D008277 ORTHO05D028234 3.7e-07 60.1 39 61.5
BcaB02g11425 Brassica carinata HOM05D000888 ORTHO05D000740 2.4e-06 57.4 158 36.7
A05p21970 Brassica napus HOM05D010967 ORTHO05D028117 3.2e-06 57.0 143 39.2
BcaNung05365 Brassica carinata HOM05D004489 ORTHO05D094850 4.1e-06 56.6 89 44.9
BraA07t28964Z Brassica rapa HOM05D004489 ORTHO05D010056 4.1e-06 56.6 93 51.6
BraA01t02558Z Brassica rapa HOM05D010967 ORTHO05D108345 5.4e-06 56.2 129 41.1
BraA01t03541Z Brassica rapa HOM05D010967 ORTHO05D028117 5.4e-06 56.2 129 41.1
C04p22330 Brassica napus HOM05D008277 ORTHO05D011446 7.0e-06 55.8 78 38.5


User provided reference genes

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