Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g11208 Brassica carinata HOM05D007774 ORTHO05D000309 9.9e-70 266.5 124 100.0
BcaB06g27138 Brassica carinata HOM05D007774 ORTHO05D000309 3.9e-66 254.6 124 96.8
BcaB02g11205 Brassica carinata HOM05D007774 ORTHO05D000309 1.1e-65 253.1 124 96.0
BcaB06g26683 Brassica carinata HOM05D007774 ORTHO05D000309 1.1e-65 253.1 124 96.0
BcaB06g26754 Brassica carinata HOM05D007774 ORTHO05D000309 1.9e-65 252.3 124 96.0
BcaB02g11517 Brassica carinata HOM05D007774 ORTHO05D000309 2.4e-63 245.4 119 96.6
BcaB06g26646 Brassica carinata HOM05D007774 ORTHO05D000309 2.4e-63 245.4 124 94.4
BcaB06g26508 Brassica carinata HOM05D007774 ORTHO05D000309 6.7e-58 227.3 113 93.8
BcaB04g16980 Brassica carinata HOM05D007774 ORTHO05D000309 7.4e-49 197.2 118 80.5
BcaB05g24508 Brassica carinata HOM05D001224 ORTHO05D000309 4.3e-41 171.4 104 74.0
BcaB02g11463 Brassica carinata HOM05D001224 ORTHO05D000309 3.7e-40 168.3 106 72.6
BcaC06g36173 Brassica carinata HOM05D007774 ORTHO05D000309 3.8e-37 158.3 120 61.7
BcaC08g43835 Brassica carinata HOM05D007774 ORTHO05D000309 1.9e-36 156.0 120 61.7
BcaC01g02929 Brassica carinata HOM05D007774 ORTHO05D000309 2.3e-34 149.1 122 59.8
BcaC02g10427 Brassica carinata HOM05D007774 ORTHO05D000309 1.0e-29 133.7 115 56.5
BcaB05g23793 Brassica carinata HOM05D007774 ORTHO05D000309 3.8e-29 131.7 113 60.2
BcaC05g26851 Brassica carinata HOM05D007774 ORTHO05D000309 3.8e-29 131.7 91 64.8
BolC4t24443H Brassica oleracea HOM05D007774 ORTHO05D000309 9.4e-28 127.1 115 55.7
BcaB05g24221 Brassica carinata HOM05D007774 ORTHO05D000309 6.7e-26 120.9 79 72.2
BcaB05g22582 Brassica carinata HOM05D007774 ORTHO05D000309 2.0e-25 119.4 55 96.4
BcaB06g27418 Brassica carinata HOM05D007774 ORTHO05D000309 9.1e-23 110.5 93 58.1
BcaB04g18433 Brassica carinata HOM05D007774 ORTHO05D000309 1.5e-20 103.2 49 93.9
BolC2t09377H Brassica oleracea HOM05D007774 ORTHO05D000309 2.5e-20 102.4 98 49.0
BcaB04g17488 Brassica carinata HOM05D007774 ORTHO05D000309 6.1e-19 97.8 70 68.6
BcaC03g13868 Brassica carinata HOM05D007774 ORTHO05D000309 3.0e-18 95.5 67 67.2
BcaC02g10455 Brassica carinata HOM05D007774 ORTHO05D000309 1.2e-17 93.6 91 48.4
BcaC01g01743 Brassica carinata HOM05D007774 ORTHO05D000309 5.7e-17 91.3 103 42.7
BolC6t36100H Brassica oleracea HOM05D007774 ORTHO05D000309 7.5e-17 90.9 96 45.8
BcaB01g02010 Brassica carinata HOM05D007774 ORTHO05D000309 9.8e-17 90.5 103 43.7
BcaB06g27901 Brassica carinata HOM05D007774 ORTHO05D000309 9.8e-17 90.5 103 43.7
BcaB08g35933 Brassica carinata HOM05D007774 ORTHO05D000309 1.3e-16 90.1 112 41.1
BcaNung05585 Brassica carinata HOM05D007774 ORTHO05D000309 1.3e-16 90.1 96 45.8
BraA02t06986Z Brassica rapa HOM05D007774 ORTHO05D000309 1.3e-16 90.1 100 44.0
BcaB07g33250 Brassica carinata HOM05D007774 ORTHO05D000309 2.2e-16 89.4 103 43.7
BcaB06g27506 Brassica carinata HOM05D007774 ORTHO05D000309 4.8e-16 88.2 83 50.6
BcaB01g02175 Brassica carinata HOM05D007774 ORTHO05D000309 8.3e-16 87.4 103 41.7
BcaB03g16083 Brassica carinata HOM05D007774 ORTHO05D000309 5.4e-15 84.7 103 41.7
BcaC02g10529 Brassica carinata HOM05D007774 ORTHO05D000309 5.4e-15 84.7 117 38.5
BcaB07g33982 Brassica carinata HOM05D007774 ORTHO05D000309 7.0e-15 84.3 113 38.1
BcaB02g11187 Brassica carinata HOM05D007774 ORTHO05D000309 1.6e-14 83.2 72 56.9
BcaC06g34090 Brassica carinata HOM05D007774 ORTHO05D000309 1.6e-14 83.2 124 39.5
BcaC08g45193 Brassica carinata HOM05D007774 ORTHO05D000309 1.6e-14 83.2 117 38.5
BcaC02g09596 Brassica carinata HOM05D007774 ORTHO05D000309 3.5e-14 82.0 88 43.2
BcaB03g16006 Brassica carinata HOM05D007774 ORTHO05D000309 4.5e-14 81.6 80 42.5
AL3G46750 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 1.3e-13 80.1 96 45.8
BcaC04g20915 Brassica carinata HOM05D007774 ORTHO05D000309 1.7e-13 79.7 92 42.4
BcaC04g22268 Brassica carinata HOM05D007774 ORTHO05D000309 2.2e-13 79.3 90 43.3
A01p38280 Brassica napus HOM05D001038 ORTHO05D000395 2.2e-13 79.3 74 50.0
BraA09t41073Z Brassica rapa HOM05D007774 ORTHO05D000309 2.2e-13 79.3 74 50.0
BraA02t08177Z Brassica rapa HOM05D007774 ORTHO05D000309 2.9e-13 79.0 117 36.8
BcaB01g02983 Brassica carinata HOM05D007774 ORTHO05D000309 3.8e-13 78.6 123 38.2
BcaC01g02494 Brassica carinata HOM05D009173 ORTHO05D000309 3.8e-13 78.6 93 40.9
AL4G18060 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 5.0e-13 78.2 87 49.4
BcaNung03185 Brassica carinata HOM05D007774 ORTHO05D000309 5.0e-13 78.2 122 38.5
AL9U10530 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 6.5e-13 77.8 96 44.8
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 1.5e-12 76.6 94 41.5
BcaB02g11020 Brassica carinata HOM05D007774 ORTHO05D000309 1.9e-12 76.3 90 42.2
BcaB05g22492 Brassica carinata HOM05D007774 ORTHO05D000309 1.9e-12 76.3 100 38.0
BcaB05g22493 Brassica carinata HOM05D007774 ORTHO05D000309 1.9e-12 76.3 100 38.0
BcaC02g09058 Brassica carinata HOM05D007774 ORTHO05D000309 2.5e-12 75.9 115 40.9
AL1G56990 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 4.2e-12 75.1 87 48.3
BcaC04g20956 Brassica carinata HOM05D008073 ORTHO05D000309 4.2e-12 75.1 80 46.2
C09p37560 Brassica napus HOM05D008073 ORTHO05D000309 4.2e-12 75.1 80 46.2
BolC3t19075H Brassica oleracea HOM05D007774 ORTHO05D000309 4.2e-12 75.1 90 42.2
BolC9t56587H Brassica oleracea HOM05D008073 ORTHO05D000309 4.2e-12 75.1 80 46.2
BcaC09g50600 Brassica carinata HOM05D007774 ORTHO05D000309 5.5e-12 74.7 63 54.0
BcaB05g23917 Brassica carinata HOM05D007774 ORTHO05D000309 9.4e-12 73.9 99 38.4
BraA09t38926Z Brassica rapa HOM05D009173 ORTHO05D000309 9.4e-12 73.9 86 41.9
C09p37880 Brassica napus HOM05D001038 ORTHO05D000395 1.6e-11 73.2 81 44.4
BolC9t56621H Brassica oleracea HOM05D001038 ORTHO05D000395 1.6e-11 73.2 81 44.4
BcaC04g20923 Brassica carinata HOM05D007774 ORTHO05D000395 2.1e-11 72.8 80 43.8
BolC8t49307H Brassica oleracea HOM05D007774 ORTHO05D000309 2.1e-11 72.8 82 41.5
BcaC07g38082 Brassica carinata HOM05D009173 ORTHO05D000309 3.6e-11 72.0 83 41.0
BolC6t37988H Brassica oleracea HOM05D007774 ORTHO05D000309 4.7e-11 71.6 86 41.9
AL8G20120 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 8.0e-11 70.9 96 41.7
AL8G21820 Arabidopsis lyrata HOM05D007774 ORTHO05D000309 1.4e-10 70.1 102 35.3
BcaC04g23317 Brassica carinata HOM05D009173 ORTHO05D000309 1.8e-10 69.7 92 37.0
BcaB08g35546 Brassica carinata HOM05D007774 ORTHO05D000309 3.0e-10 68.9 93 41.9
AL2G19320 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 5.2e-10 68.2 66 51.5
C07p07480 Brassica napus HOM05D001038 ORTHO05D000395 5.2e-10 68.2 81 42.0
BolC7t41165H Brassica oleracea HOM05D007774 ORTHO05D000309 5.2e-10 68.2 81 42.0
AL6G38890 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 6.8e-10 67.8 88 38.6
BcaC06g36128 Brassica carinata HOM05D007774 ORTHO05D000395 6.8e-10 67.8 80 41.2
BraA02t07615Z Brassica rapa HOM05D007774 ORTHO05D000309 6.8e-10 67.8 91 40.7
Sp5g12640 Schrenkiella parvula HOM05D009173 ORTHO05D000309 6.8e-10 67.8 97 41.2
AL4G17480 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 8.8e-10 67.4 84 41.7
AL5G24470 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 2.0e-09 66.2 95 40.0
BcaB03g15391 Brassica carinata HOM05D009173 ORTHO05D000309 2.0e-09 66.2 93 36.6
BolC7t43639H Brassica oleracea HOM05D008073 ORTHO05D000309 2.6e-09 65.9 91 38.5
BolC3t20228H Brassica oleracea HOM05D007774 ORTHO05D000309 5.7e-09 64.7 50 60.0
BolC8t49310H Brassica oleracea HOM05D007774 ORTHO05D000309 7.5e-09 64.3 100 37.0
BolC7t41302H Brassica oleracea HOM05D009173 ORTHO05D000309 9.8e-09 63.9 97 34.0
BcaB01g01569 Brassica carinata HOM05D009173 ORTHO05D000309 1.7e-08 63.2 76 42.1
BcaC08g43767 Brassica carinata HOM05D009173 ORTHO05D000309 2.2e-08 62.8 100 32.0
Sp5g18110 Schrenkiella parvula HOM05D009173 ORTHO05D000309 2.2e-08 62.8 78 41.0
Sp5g10600 Schrenkiella parvula HOM05D009173 ORTHO05D000309 2.8e-08 62.4 81 44.4
AL3G40990 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 3.7e-08 62.0 76 39.5
AL6G49470 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 3.7e-08 62.0 76 39.5
C06p11380 Brassica napus HOM05D009173 ORTHO05D027589 3.7e-08 62.0 84 34.5
BcaB02g10182 Brassica carinata HOM05D000012 ORTHO05D009649 8.3e-08 60.8 35 80.0
Eucgr.A00047 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.1e-07 60.5 57 45.6
Eucgr.E03636 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.1e-07 60.5 57 45.6
Eucgr.L01799 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.1e-07 60.5 57 45.6
Eucgr.L02007 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.1e-07 60.5 57 45.6
Eucgr.L02287 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.1e-07 60.5 57 45.6
Eucgr.L02571 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.4e-07 60.1 57 45.6
A07p31530 Brassica napus HOM05D008073 ORTHO05D000309 1.8e-07 59.7 79 38.0
Eucgr.E03477 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.8e-07 59.7 75 40.0
BcaB01g00830 Brassica carinata HOM05D008073 ORTHO05D000309 2.4e-07 59.3 88 37.5
BolC9t53939H Brassica oleracea HOM05D007774 ORTHO05D000309 4.1e-07 58.5 80 36.2
Eucgr.B01204 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.1e-07 58.5 56 41.1
Eucgr.B01520 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.1e-07 58.5 54 48.1
Eucgr.C02166 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.1e-07 58.5 56 44.6
Medtr3g045410 Medicago truncatula HOM05D001383 ORTHO05D000309 4.1e-07 58.5 73 37.0
Eucgr.A00957 Eucalyptus grandis HOM05D007774 ORTHO05D000309 5.4e-07 58.2 55 45.5
BcaB03g15638 Brassica carinata HOM05D008073 ORTHO05D000309 7.0e-07 57.8 71 39.4
BcaB07g33163 Brassica carinata HOM05D012943 ORTHO05D027589 7.0e-07 57.8 103 31.1
BolC2t09463H Brassica oleracea HOM05D007774 ORTHO05D000309 7.0e-07 57.8 80 36.2
EL10Ac7g16399 Beta vulgaris HOM05D008388 ORTHO05D000309 9.2e-07 57.4 77 31.2
BolC5t33238H Brassica oleracea HOM05D007774 ORTHO05D000309 9.2e-07 57.4 69 40.6
Eucgr.A00901 Eucalyptus grandis HOM05D001383 ORTHO05D000309 9.2e-07 57.4 53 45.3
EL10As8g23853 Beta vulgaris HOM05D008388 ORTHO05D000309 1.2e-06 57.0 77 31.2
BcaB06g26984 Brassica carinata HOM05D008073 ORTHO05D000309 1.2e-06 57.0 74 37.8
BcaC01g02038 Brassica carinata HOM05D009173 ORTHO05D000309 1.2e-06 57.0 75 38.7
BolC3t19182H Brassica oleracea HOM05D009173 ORTHO05D000309 1.2e-06 57.0 75 38.7
BolC6t36277H Brassica oleracea HOM05D009173 ORTHO05D027589 1.2e-06 57.0 79 35.4
Eucgr.A01387 Eucalyptus grandis HOM05D001383 ORTHO05D000309 1.2e-06 57.0 53 45.3
EL10Ac2g03965 Beta vulgaris HOM05D008388 ORTHO05D000309 1.6e-06 56.6 77 29.9
BcaB05g25086 Brassica carinata HOM05D008073 ORTHO05D000309 1.6e-06 56.6 74 37.8
BcaC05g25280 Brassica carinata HOM05D008073 ORTHO05D000309 1.6e-06 56.6 83 37.3
Carub.0004s0648 Capsella rubella HOM05D010286 ORTHO05D000309 1.6e-06 56.6 109 30.3
EL10Ac2g03864 Beta vulgaris HOM05D000060 ORTHO05D000309 2.0e-06 56.2 77 32.5
BcaB03g15304 Brassica carinata HOM05D007774 ORTHO05D000309 2.0e-06 56.2 62 40.3
BcaC08g46090 Brassica carinata HOM05D007774 ORTHO05D000309 2.0e-06 56.2 62 40.3
Eucgr.D00391 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.0e-06 56.2 55 43.6
Eucgr.L00016 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.0e-06 56.2 55 43.6
Lsat_1_v5_gn_1_26281 Lactuca sativa HOM05D009289 ORTHO05D012683 2.0e-06 56.2 87 35.6
Medtr5g021030 Medicago truncatula HOM05D001383 ORTHO05D000309 2.0e-06 56.2 80 33.8
Eucgr.H02949 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.7e-06 55.8 55 43.6
Eucgr.J01886 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.7e-06 55.8 47 44.7
Lsat_1_v5_gn_7_91201 Lactuca sativa HOM05D009289 ORTHO05D012683 2.7e-06 55.8 89 32.6
Medtr2g008290 Medicago truncatula HOM05D001383 ORTHO05D000309 2.7e-06 55.8 80 33.8
BcaB03g15195 Brassica carinata HOM05D007774 ORTHO05D000309 3.5e-06 55.5 68 41.2
BcaC07g37763 Brassica carinata HOM05D008073 ORTHO05D000309 3.5e-06 55.5 77 37.7
A02p37000 Brassica napus HOM05D008073 ORTHO05D000309 3.5e-06 55.5 73 39.7
BolC8t48149H Brassica oleracea HOM05D008073 ORTHO05D000309 3.5e-06 55.5 77 37.7
BraA02t08687Z Brassica rapa HOM05D008073 ORTHO05D000309 3.5e-06 55.5 73 39.7
Eucgr.A01677 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.5e-06 55.5 53 43.4
EL10Ac2g03745 Beta vulgaris HOM05D008388 ORTHO05D000309 4.5e-06 55.1 77 31.2
Haze_20224 Corylus avellana HOM05D000484 ORTHO05D000346 4.5e-06 55.1 50 46.0
BcaB04g19293 Brassica carinata HOM05D008073 ORTHO05D000309 5.9e-06 54.7 88 36.4
BcaB05g24067 Brassica carinata HOM05D008073 ORTHO05D031741 5.9e-06 54.7 76 39.5
Eucgr.C01025 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.9e-06 54.7 57 40.4
Eucgr.E01520 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.9e-06 54.7 55 41.8
Eucgr.K02370 Eucalyptus grandis HOM05D001383 ORTHO05D000309 5.9e-06 54.7 55 41.8
Hma1.2p1_1051F.1_g252070 Hydrangea macrophylla HOM05D008126 ORTHO05D000309 5.9e-06 54.7 43 48.8
Lsat_1_v5_gn_2_100421 Lactuca sativa HOM05D009289 ORTHO05D012683 5.9e-06 54.7 89 31.5
AT1G67235 Arabidopsis thaliana HOM05D008073 ORTHO05D000309 7.7e-06 54.3 70 40.0
BcaB02g10845 Brassica carinata HOM05D008073 ORTHO05D000309 7.7e-06 54.3 71 39.4
Medtr1g070405 Medicago truncatula HOM05D001383 ORTHO05D000309 7.7e-06 54.3 79 34.2


User provided reference genes

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