Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g10666 Brassica carinata HOM05D004617 ORTHO05D005531 3.8e-166 588.2 314 100.0
BcaC01g02324 Brassica carinata HOM05D004617 ORTHO05D005531 2.6e-151 538.9 314 91.7
BolC3t18931H Brassica oleracea HOM05D004617 ORTHO05D005531 3.8e-150 535.0 310 91.9
C03p66610 Brassica napus HOM05D004617 ORTHO05D005531 1.9e-149 532.7 310 91.6
BraA06t25690Z Brassica rapa HOM05D004617 ORTHO05D005531 6.3e-145 517.7 311 89.4
A06p27500 Brassica napus HOM05D004617 ORTHO05D005531 2.4e-144 515.8 311 89.1
Sp5g13810 Schrenkiella parvula HOM05D004617 ORTHO05D005531 7.2e-141 504.2 316 86.7
Thhalv10010559m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 2.8e-129 465.7 317 81.1
Carub.0005s1437 Capsella rubella HOM05D004617 ORTHO05D005531 2.2e-126 456.1 317 78.9
AL5G27600 Arabidopsis lyrata HOM05D004617 ORTHO05D005531 2.9e-126 455.7 316 78.2
CARHR156970 Cardamine hirsuta HOM05D004617 ORTHO05D005531 6.5e-126 454.5 319 78.7
AT3G48210 Arabidopsis thaliana HOM05D004617 ORTHO05D005531 2.5e-125 452.6 316 78.5
Thhalv10010553m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 3.7e-121 438.7 313 78.0
Aa31LG4G16830 Aethionema arabicum HOM05D004617 ORTHO05D005531 4.7e-108 395.2 316 69.0
THA.LOC104818211 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 1.0e-99 367.5 319 66.1
THA.LOC104798968 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 1.4e-91 340.5 286 65.4
Thecc.03G024100 Theobroma cacao HOM05D004617 ORTHO05D005531 1.1e-64 251.1 333 45.9
A06p19470 Brassica napus HOM05D004617 ORTHO05D005531 4.6e-63 245.7 262 57.6
Ciclev10020950m.g Citrus clementina HOM05D004617 ORTHO05D005531 1.0e-62 244.6 341 42.8
COL.COLO4_30121 Corchorus olitorius HOM05D004617 ORTHO05D005531 1.5e-61 240.7 286 47.9
Gohir.A12G272900 Gossypium hirsutum HOM05D004617 ORTHO05D005531 2.5e-61 240.0 295 46.8
CiPaw.12G028900 Carya illinoinensis HOM05D004617 ORTHO05D005531 1.6e-60 237.3 309 46.0
Duzib205G1820 Durio zibethinus HOM05D004617 ORTHO05D005531 2.1e-60 236.9 288 48.3
Gorai.008G294000 Gossypium raimondii HOM05D004617 ORTHO05D005531 8.1e-60 235.0 295 46.1
BraA06t25026Z Brassica rapa HOM05D004617 ORTHO05D005531 1.1e-59 234.6 264 56.1
GSVIVG01007687001 Vitis vinifera HOM05D004617 ORTHO05D005531 1.8e-59 233.8 314 43.9
Haze_07552 Corylus avellana HOM05D004617 ORTHO05D005531 3.1e-59 233.0 332 43.1
Cpa.g.sc153.19 Carica papaya HOM05D004617 ORTHO05D005531 6.9e-59 231.9 304 45.1
Gohir.D12G273600 Gossypium hirsutum HOM05D004617 ORTHO05D005531 6.9e-59 231.9 295 45.4
Atru.chr9.2539 Acer truncatum HOM05D004617 ORTHO05D005531 2.0e-58 230.3 340 42.9
Phvul.009G175700 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 2.0e-58 230.3 303 45.5
MD06G1170100 Malus domestica HOM05D004617 ORTHO05D005531 2.6e-58 229.9 314 47.1
Potri.015G080900 Populus trichocarpa HOM05D004617 ORTHO05D005531 1.3e-57 227.6 306 44.8
Dinv38556 Davidia involucrata HOM05D004617 ORTHO05D005531 2.2e-57 226.9 313 42.8
Lalb_Chr23g0273321 Lupinus albus HOM05D004617 ORTHO05D005531 2.2e-57 226.9 296 44.9
QL10p008526 Quercus lobata HOM05D004617 ORTHO05D005531 2.9e-57 226.5 287 46.0
Nitab4.5_0011992g0040 Nicotiana tabacum HOM05D004617 ORTHO05D005531 4.9e-57 225.7 313 42.5
QL10p008663 Quercus lobata HOM05D004617 ORTHO05D005531 6.4e-57 225.3 286 46.2
Lj4g0013782 Lotus japonicus HOM05D004617 ORTHO05D005531 3.2e-56 223.0 309 43.7
Dinv20620 Davidia involucrata HOM05D004617 ORTHO05D005531 5.4e-56 222.2 307 43.3
MSTRG.23154 Avicennia marina HOM05D004617 ORTHO05D005531 9.3e-56 221.5 312 44.2
TAR629G3522 Trochodendron aralioides HOM05D004617 ORTHO05D005531 1.2e-55 221.1 316 43.4
Gohir.A09G172500 Gossypium hirsutum HOM05D004617 ORTHO05D005531 1.6e-55 220.7 277 45.8
TWI39G0523 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 1.6e-55 220.7 293 45.1
MD14G1175700 Malus domestica HOM05D004617 ORTHO05D005531 2.1e-55 220.3 314 45.5
Nitab4.5_0001284g0070 Nicotiana tabacum HOM05D004617 ORTHO05D005531 2.1e-55 220.3 313 42.8
CsaV3_1G001290 Cucumis sativus L. HOM05D004617 ORTHO05D005531 2.7e-55 219.9 311 42.8
Sc04g0001670 Simmondsia chinensis HOM05D004617 ORTHO05D005531 3.5e-55 219.5 299 43.1
Sopen03g031610 Solanum pennellii HOM05D004617 ORTHO05D005531 1.3e-54 217.6 313 41.5
Sed0022669 Sechium edule HOM05D004617 ORTHO05D005531 1.7e-54 217.2 315 41.6
Migut.O00131 Erythranthe guttata HOM05D004617 ORTHO05D005531 3.0e-54 216.5 309 43.7
Nn4g22667 Nelumbo nucifera HOM05D004617 ORTHO05D005531 3.0e-54 216.5 260 45.8
CAN.G338.4 Capsicum annuum HOM05D004617 ORTHO05D005531 5.1e-54 215.7 306 42.2
Gorai.006G189800 Gossypium raimondii HOM05D004617 ORTHO05D005531 5.1e-54 215.7 296 43.6
Oeu001681.1 Olea europaea HOM05D004617 ORTHO05D005531 5.1e-54 215.7 309 41.4
CSS0042906 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 6.6e-54 215.3 303 42.6
MELO3C026277.2 Cucumis melo HOM05D004617 ORTHO05D005531 8.7e-54 214.9 312 43.9
Solyc03g112550.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 8.7e-54 214.9 313 40.9
PGSC0003DMG400018106 Solanum tuberosum HOM05D004617 ORTHO05D005531 1.1e-53 214.5 307 41.7
TWI23G0363 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 1.9e-53 213.8 263 47.1
CSS0013084 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 2.5e-53 213.4 319 42.3
Manes.06G108000 Manihot esculenta HOM05D004617 ORTHO05D005531 2.5e-53 213.4 305 44.6
Potri.T124408 Populus trichocarpa HOM05D004617 ORTHO05D005531 4.3e-53 212.6 296 44.3
Rhsim12G0166500 Rhododendron simsii HOM05D004617 ORTHO05D005531 5.6e-53 212.2 346 37.9
DCAR_021575 Daucus carota HOM05D004617 ORTHO05D005531 7.4e-53 211.8 319 43.9
CANSAT80G0933 Cannabis sativa HOM05D004617 ORTHO05D005531 9.6e-53 211.5 310 43.5
VMungo1309G0654 Vigna mungo HOM05D004617 ORTHO05D005531 1.3e-52 211.1 325 41.2
Potri.012G088000 Populus trichocarpa HOM05D004617 ORTHO05D005531 2.8e-52 209.9 313 42.5
MSTRG.11480 Avicennia marina HOM05D004617 ORTHO05D005531 3.6e-52 209.5 308 42.2
Cc04_g12560 Coffea canephora HOM05D004617 ORTHO05D005531 3.6e-52 209.5 303 41.9
Hund09456 Selenicereus undatus HOM05D004617 ORTHO05D005531 3.6e-52 209.5 306 40.5
arahy.Tifrunner.gnm1.ann1.B97T9I Arachis hypogaea HOM05D004617 ORTHO05D005531 1.8e-51 207.2 306 41.5
CiPaw.11G022700 Carya illinoinensis HOM05D004617 ORTHO05D005531 2.4e-51 206.8 304 42.1
ECA246G2887 Erigeron canadensis HOM05D004617 ORTHO05D005531 2.4e-51 206.8 312 40.7
PGR044G1277 Punica granatum HOM05D004617 ORTHO05D005531 2.4e-51 206.8 308 40.9
arahy.Tifrunner.gnm1.ann1.P4R84V Arachis hypogaea HOM05D004617 ORTHO05D005531 5.3e-51 205.7 302 41.4
Lsat_1_v5_gn_5_15901 Lactuca sativa HOM05D004617 ORTHO05D005531 9.0e-51 204.9 302 41.4
FAN05G0977 Fragaria x ananassa HOM05D004617 ORTHO05D005531 1.5e-50 204.1 316 41.5
Glyma.05G040000 Glycine max HOM05D004617 ORTHO05D005531 1.5e-50 204.1 310 42.6
Phvul.003G203200 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 1.5e-50 204.1 300 42.0
FvH4_5g05820 Fragaria vesca HOM05D004617 ORTHO05D005531 2.0e-50 203.8 273 43.2
ClCG06G017200 Citrullus lanatus HOM05D004617 ORTHO05D005531 3.4e-50 203.0 311 40.2
TPR.G37539 Trifolium pratense HOM05D004617 ORTHO05D005531 3.4e-50 203.0 296 42.6
vmacro16629 Vaccinium macrocarpon HOM05D004617 ORTHO05D005531 3.4e-50 203.0 331 37.5
VMungo1215G2409 Vigna mungo HOM05D004617 ORTHO05D005531 3.4e-50 203.0 308 39.9
SGA_v2.0_scaffold90G27877 Striga asiatica HOM05D004617 ORTHO05D005531 2.2e-49 200.3 300 40.7
HanXRQChr05g0154591 Helianthus annuus HOM05D004617 ORTHO05D005531 2.9e-49 199.9 316 38.3
FAN13G0632 Fragaria x ananassa HOM05D004617 ORTHO05D005531 3.8e-49 199.5 261 43.7
PSO478G3702 Papaver somniferum HOM05D004617 ORTHO05D005531 3.8e-49 199.5 302 41.4
RcHm_v2.0_Chr7g0193001 Rosa chinensis HOM05D004617 ORTHO05D005531 3.8e-49 199.5 315 40.6
Ca_21946_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 4.9e-49 199.1 313 41.2
FvH4_6g24101 Fragaria vesca HOM05D004617 ORTHO05D005531 4.2e-48 196.1 316 39.9
FAN08G0972 Fragaria x ananassa HOM05D004617 ORTHO05D005531 5.5e-48 195.7 259 44.0
Ca_29672_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 3.5e-47 193.0 275 42.2
Peaxi162Scf00089g01634 Petunia axillaris HOM05D004617 ORTHO05D005531 3.5e-47 193.0 321 38.0
Psat4g059160 Pisum sativum HOM05D004617 ORTHO05D005531 3.5e-47 193.0 298 41.3
PSO017G2275 Papaver somniferum HOM05D004617 ORTHO05D005531 4.6e-47 192.6 306 40.5
FAN18G1615 Fragaria x ananassa HOM05D004617 ORTHO05D005531 7.9e-47 191.8 229 45.0
EL10Ac5g10692 Beta vulgaris HOM05D004617 ORTHO05D005531 1.0e-46 191.4 227 43.2
Sc12g0005180 Simmondsia chinensis HOM05D004617 ORTHO05D005531 1.8e-46 190.7 311 39.2
AUR62008173 Chenopodium quinoa HOM05D004617 ORTHO05D005531 6.7e-46 188.7 254 42.1
AUR62029851 Chenopodium quinoa HOM05D004617 ORTHO05D005531 3.3e-45 186.4 310 38.4
Eucgr.K02817 Eucalyptus grandis HOM05D004617 ORTHO05D005531 9.6e-45 184.9 334 37.1
Sabra15G0104900 Salix brachista HOM05D004617 ORTHO05D005531 2.1e-44 183.7 303 38.9
BcaC07g39309 Brassica carinata HOM05D004617 ORTHO05D005531 4.8e-44 182.6 188 58.0
AUR62028750 Chenopodium quinoa HOM05D004617 ORTHO05D005531 8.1e-44 181.8 251 41.4
Hma1.2p1_0046F.1_g026830 Hydrangea macrophylla HOM05D004617 ORTHO05D005531 8.1e-44 181.8 328 36.6
Lj9A445T80 Lonicera japonica HOM05D004617 ORTHO05D005531 1.1e-43 181.4 366 35.2
Sopen06g027890 Solanum pennellii HOM05D004617 ORTHO05D005531 1.4e-43 181.0 312 38.8
Medtr4g105330 Medicago truncatula HOM05D004617 ORTHO05D005531 2.4e-43 180.3 297 39.1
Aqoxy3G01097 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 4.0e-43 179.5 303 38.9
PGSC0003DMG400027080 Solanum tuberosum HOM05D004617 ORTHO05D005531 4.0e-43 179.5 310 36.5
C08p23230 Brassica napus HOM05D004617 ORTHO05D005531 9.0e-43 178.3 201 53.7
Lj5A127T55 Lonicera japonica HOM05D004617 ORTHO05D005531 2.6e-42 176.8 245 45.3
Sabra12G0062800 Salix brachista HOM05D004617 ORTHO05D005531 3.4e-42 176.4 353 37.1
Solyc06g071600.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 3.4e-42 176.4 308 36.7
Actinidia19118 Actinidia chinensis HOM05D004617 ORTHO05D005531 1.9e-40 170.6 234 43.6
CAN.G993.37 Capsicum annuum HOM05D004617 ORTHO05D005531 3.2e-40 169.9 303 36.6
Gohir.D09G168200 Gossypium hirsutum HOM05D004617 ORTHO05D005531 4.2e-40 169.5 296 39.2
Prupe.5G169600 Prunus persica HOM05D004617 ORTHO05D005531 1.2e-39 167.9 316 38.9
SalBow5G2990 Salvia bowleyana HOM05D004617 ORTHO05D005531 3.7e-36 156.4 234 40.6
SalBow5G0770 Salvia bowleyana HOM05D004617 ORTHO05D005531 4.8e-36 156.0 234 40.6
Nitab4.5_0003918g0030 Nicotiana tabacum HOM05D004617 ORTHO05D005531 2.6e-34 150.2 303 36.3
TAR371G0263 Trochodendron aralioides HOM05D004617 ORTHO05D005531 5.9e-34 149.1 190 42.1
MBI16_g23858_MAGBIO Magnolia biondii HOM05D004617 ORTHO05D005531 2.2e-33 147.1 309 35.0
HPP92_011588 Vanilla planifolia HOM05D004617 ORTHO05D005531 2.2e-33 147.1 312 35.9
CDE05G2613 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 3.8e-33 146.4 269 35.7
unitig_0.g2533 Utricularia gibba HOM05D004617 ORTHO05D005531 6.5e-33 145.6 247 38.9
DCAR_004467 Daucus carota HOM05D004617 ORTHO05D005531 4.2e-32 142.9 223 40.4
ATR1152G034 Amborella trichopoda HOM05D004617 ORTHO05D005531 1.2e-31 141.4 305 34.8
SEGI_25965 Sequoiadendron giganteum HOM05D004617 ORTHO05D005531 4.6e-31 139.4 221 37.6
FAN02G3554 Fragaria x ananassa HOM05D004617 ORTHO05D005531 1.5e-29 134.4 137 46.0
Cpa.g.sc153.20 Carica papaya HOM05D004617 ORTHO05D005531 3.3e-29 133.3 196 40.8
CDE02G4133 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 3.1e-27 126.7 217 37.8
Psat4g095560 Pisum sativum HOM05D004617 ORTHO05D005531 7.7e-26 122.1 262 34.4
Glyma.04G186200 Glycine max HOM05D004617 ORTHO05D005531 1.3e-25 121.3 150 45.3
Os01g0973200 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 1.7e-25 120.9 273 31.9
Os05g0110700 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 1.7e-25 120.9 302 29.8
Zm00001eb139780 Zea mays HOM05D004617 ORTHO05D005531 2.7e-23 113.6 219 31.1
Zm00001eb362200 Zea mays HOM05D004617 ORTHO05D005531 1.5e-21 107.8 261 30.7
Glyma.06G179933 Glycine max HOM05D004617 ORTHO05D005531 6.9e-19 99.0 139 41.0
Aqoxy5G01948 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 3.2e-16 90.1 208 35.6
Zm00001eb355840 Zea mays HOM05D004617 ORTHO05D005531 3.2e-16 90.1 199 30.2
arahy.Tifrunner.gnm1.ann1.H09BLY Arachis hypogaea HOM05D004617 ORTHO05D005531 4.4e-13 79.7 151 36.4
Mapoly0029s0121 Marchantia polymorpha HOM05D004617 ORTHO05D005531 1.7e-12 77.8 196 30.6
Atru.chr9.2524 Acer truncatum HOM05D004617 ORTHO05D005531 2.0e-10 70.9 93 45.2
SMO200G0114 Selaginella moellendorffii HOM05D004617 ORTHO05D005531 2.6e-10 70.5 119 33.6
Pp3c3_37370 Physcomitrium patens HOM05D004617 ORTHO05D005531 5.9e-10 69.3 222 27.5
Pp3c8_1270 Physcomitrium patens HOM05D004617 ORTHO05D005531 8.5e-09 65.5 169 24.9
Glyma.17G086900 Glycine max HOM05D004617 ORTHO05D005531 1.1e-08 65.1 71 47.9
vmacro20892 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 7.2e-08 62.4 77 40.3
arahy.Tifrunner.gnm1.ann1.8UC028 Arachis hypogaea HOM05D004617 ORTHO05D005531 8.0e-07 58.9 104 34.6
PRCOL_00005442 Prasinoderma coloniale HOM05D004617 ORTHO05D005531 1.8e-06 57.8 87 36.8


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