Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g02453 Brassica carinata HOM05D011499 ORTHO05D011963 2.7e-52 208.4 104 100.0
BcaB04g17658 Brassica carinata HOM05D011499 ORTHO05D011963 3.9e-43 177.9 112 83.9
BcaB02g07232 Brassica carinata HOM05D011499 ORTHO05D011963 1.5e-42 176.0 104 86.5
BcaC03g14231 Brassica carinata HOM05D011499 ORTHO05D011963 1.9e-42 175.6 104 83.7
BcaC04g22205 Brassica carinata HOM05D011499 ORTHO05D011963 5.6e-42 174.1 104 85.6
BcaC03g16152 Brassica carinata HOM05D011499 ORTHO05D011963 9.6e-42 173.3 104 83.7
BcaB05g23057 Brassica carinata HOM05D011499 ORTHO05D011963 8.1e-41 170.2 104 83.7
BcaC08g43898 Brassica carinata HOM05D011499 ORTHO05D011963 6.4e-38 160.6 111 73.0
BcaC08g45874 Brassica carinata HOM05D011499 ORTHO05D011963 1.3e-30 136.3 111 68.5
BcaC09g49356 Brassica carinata HOM05D011499 ORTHO05D011963 4.6e-28 127.9 104 66.3
BcaB07g33626 Brassica carinata HOM05D011499 ORTHO05D011963 1.2e-20 103.2 113 51.3
BcaNung00856 Brassica carinata HOM05D011499 ORTHO05D011963 1.4e-13 79.7 118 44.9
Thhalv10002194m.g Eutrema salsugineum HOM05D006735 ORTHO05D011963 3.6e-12 75.1 89 44.9
BcaC07g38983 Brassica carinata HOM05D011499 ORTHO05D011963 4.1e-08 61.6 41 73.2
BcaB02g10963 Brassica carinata HOM05D006735 ORTHO05D011963 9.1e-08 60.5 97 38.1
BcaB04g18785 Brassica carinata HOM05D006735 ORTHO05D011963 9.1e-08 60.5 97 37.1
C07p37620 Brassica napus HOM05D006735 ORTHO05D010262 4.5e-07 58.2 103 37.9
C09p55340 Brassica napus HOM05D006735 ORTHO05D009558 4.5e-07 58.2 103 37.9
BcaC09g51566 Brassica carinata HOM05D006735 ORTHO05D009558 7.7e-07 57.4 52 44.2
C04p61000 Brassica napus HOM05D006735 ORTHO05D009558 7.7e-07 57.4 52 44.2
AT2G20625 Arabidopsis thaliana HOM05D006735 ORTHO05D011963 1.0e-06 57.0 55 50.9
BcaC04g20691 Brassica carinata HOM05D006735 ORTHO05D009558 1.0e-06 57.0 52 44.2
C09p40570 Brassica napus HOM05D006735 ORTHO05D009558 1.0e-06 57.0 52 44.2
AL3G33240 Arabidopsis lyrata HOM05D006735 ORTHO05D009558 1.3e-06 56.6 63 41.3
A09p42550 Brassica napus HOM05D006735 ORTHO05D009558 1.7e-06 56.2 52 42.3
BcaB02g10644 Brassica carinata HOM05D006735 ORTHO05D011963 2.2e-06 55.8 97 36.1
C09p22370 Brassica napus HOM05D006735 ORTHO05D009558 2.2e-06 55.8 52 46.2
BcaC03g18043 Brassica carinata HOM05D006735 ORTHO05D009558 2.9e-06 55.5 56 42.9
A07p02010 Brassica napus HOM05D006735 ORTHO05D009558 2.9e-06 55.5 93 34.4
C09p53130 Brassica napus HOM05D006735 ORTHO05D009558 2.9e-06 55.5 100 33.0
BolC8t47857H Brassica oleracea HOM05D006735 ORTHO05D009558 2.9e-06 55.5 103 37.9
AT3G19790 Arabidopsis thaliana HOM05D006735 ORTHO05D009558 3.8e-06 55.1 54 46.3
BolC9t58189H Brassica oleracea HOM05D006735 ORTHO05D009558 3.8e-06 55.1 96 33.3
BcaB03g16748 Brassica carinata HOM05D006735 ORTHO05D011963 5.0e-06 54.7 69 43.5
BcaC03g15864 Brassica carinata HOM05D006735 ORTHO05D009558 6.5e-06 54.3 52 44.2
BcaC07g38146 Brassica carinata HOM05D006735 ORTHO05D009558 6.5e-06 54.3 52 44.2
BcaC08g45821 Brassica carinata HOM05D006735 ORTHO05D009558 6.5e-06 54.3 52 44.2
A08p25190 Brassica napus HOM05D006735 ORTHO05D009558 6.5e-06 54.3 52 44.2
C01p49010 Brassica napus HOM05D006735 ORTHO05D000586 6.5e-06 54.3 52 44.2
C03p17760 Brassica napus HOM05D006735 ORTHO05D009558 6.5e-06 54.3 109 34.9
BcaB01g02897 Brassica carinata HOM05D006735 ORTHO05D009558 8.5e-06 53.9 56 42.9
A01p26730 Brassica napus HOM05D006735 ORTHO05D009558 8.5e-06 53.9 48 45.8


User provided reference genes

Program Settings