Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01643 Brassica carinata HOM05D007203 ORTHO05D011558 1.4e-149 533.1 316 100.0
BcaB08g34543 Brassica carinata HOM05D007203 ORTHO05D011558 5.6e-93 345.1 486 54.5
BcaB01g02001 Brassica carinata HOM05D007203 ORTHO05D008395 1.4e-64 250.8 140 96.4
BcaB07g32667 Brassica carinata HOM05D003147 ORTHO05D003245 4.6e-47 192.6 128 85.2
BcaB06g26429 Brassica carinata HOM05D007203 ORTHO05D011558 1.9e-40 170.6 89 100.0
BcaC05g26664 Brassica carinata HOM05D007203 ORTHO05D095942 1.8e-38 164.1 117 82.1
BcaB03g16102 Brassica carinata HOM05D007203 ORTHO05D011558 2.0e-34 150.6 86 95.3
BcaB03g16331 Brassica carinata HOM05D007203 ORTHO05D011558 8.0e-31 138.7 209 49.3
BcaC02g12420 Brassica carinata HOM05D007203 ORTHO05D027555 8.8e-30 135.2 365 34.5
BcaB03g14937 Brassica carinata HOM05D007203 ORTHO05D011558 1.1e-29 134.8 71 98.6
BcaB01g01921 Brassica carinata HOM05D007203 ORTHO05D011558 2.0e-29 134.0 212 50.0
C06p26970 Brassica napus HOM05D007203 ORTHO05D020127 4.8e-28 129.4 270 49.6
BcaC09g49573 Brassica carinata HOM05D007203 ORTHO05D011558 1.4e-27 127.9 114 67.5
BcaNung01161 Brassica carinata HOM05D007203 ORTHO05D011558 1.4e-27 127.9 114 67.5
BolC2t09636H Brassica oleracea HOM05D007203 ORTHO05D013810 1.4e-27 127.9 531 30.1
BcaB03g16432 Brassica carinata HOM05D007203 ORTHO05D011558 9.1e-27 125.2 89 78.7
BcaB01g01435 Brassica carinata HOM05D007203 ORTHO05D011558 2.0e-26 124.0 89 78.7
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 7.7e-26 122.1 498 32.9
BcaC05g27574 Brassica carinata HOM05D007203 ORTHO05D039927 7.7e-26 122.1 104 66.3
C05p35590 Brassica napus HOM05D007203 ORTHO05D039927 7.7e-26 122.1 104 66.3
A01p25660 Brassica napus HOM05D007203 ORTHO05D013810 1.1e-24 118.2 533 31.5
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 1.9e-24 117.5 95 73.7
C05p39250 Brassica napus HOM05D007203 ORTHO05D039141 1.9e-24 117.5 398 35.4
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 5.5e-24 115.9 95 72.6
BcaB02g11368 Brassica carinata HOM05D007203 ORTHO05D011558 2.7e-23 113.6 89 75.3
BolC3t17977H Brassica oleracea HOM05D007203 ORTHO05D011558 3.6e-23 113.2 111 62.2
BolC9t57189H Brassica oleracea HOM05D007203 ORTHO05D013810 8.0e-23 112.1 111 62.2
C03p33440 Brassica napus HOM05D007203 ORTHO05D027708 1.0e-22 111.7 111 62.2
BolC3t15665H Brassica oleracea HOM05D007203 ORTHO05D013810 1.0e-22 111.7 111 62.2
C06p42690 Brassica napus HOM05D007203 ORTHO05D013810 1.4e-22 111.3 110 64.5
BolC8t49801H Brassica oleracea HOM05D007203 ORTHO05D013810 1.4e-22 111.3 95 68.4
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 1.8e-22 110.9 395 32.7
BolC2t09431H Brassica oleracea HOM05D007203 ORTHO05D027708 1.8e-22 110.9 110 64.5
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 2.3e-22 110.5 95 68.4
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 2.3e-22 110.5 95 68.4
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 3.0e-22 110.2 114 62.3
BcaC08g43729 Brassica carinata HOM05D007203 ORTHO05D092975 6.8e-22 109.0 127 58.3
BcaC01g00586 Brassica carinata HOM05D007203 ORTHO05D031716 8.8e-22 108.6 112 63.4
C01p16070 Brassica napus HOM05D007203 ORTHO05D011558 1.5e-21 107.8 111 60.4
BcaC08g43405 Brassica carinata HOM05D007203 ORTHO05D094647 2.0e-21 107.5 111 60.4
BcaB03g12495 Brassica carinata HOM05D007203 ORTHO05D020127 3.4e-21 106.7 230 39.6
BcaB04g18412 Brassica carinata HOM05D007203 ORTHO05D011558 4.4e-21 106.3 321 37.4
C06p11120 Brassica napus HOM05D007203 ORTHO05D027555 4.4e-21 106.3 58 93.1
C09p43170 Brassica napus HOM05D007203 ORTHO05D013810 7.5e-21 105.5 114 60.5
A01p36020 Brassica napus HOM05D007203 ORTHO05D020137 9.8e-21 105.1 127 56.7
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 2.2e-20 104.0 123 58.5
BraA05t21718Z Brassica rapa HOM05D007203 ORTHO05D011558 3.7e-20 103.2 58 91.4
BolC6t36233H Brassica oleracea HOM05D004128 ORTHO05D024421 4.8e-20 102.8 134 55.2
BcaC01g03026 Brassica carinata HOM05D007203 ORTHO05D031716 6.3e-20 102.4 111 58.6
C03p57000 Brassica napus HOM05D007203 ORTHO05D031716 6.3e-20 102.4 111 58.6
C01p47030 Brassica napus HOM05D007203 ORTHO05D020137 8.3e-20 102.1 124 55.6
BcaC05g27919 Brassica carinata HOM05D007203 ORTHO05D039141 1.8e-19 100.9 121 53.7
BolC5t32660H Brassica oleracea HOM05D007203 ORTHO05D011558 1.8e-19 100.9 121 53.7
BolC5t32921H Brassica oleracea HOM05D004128 ORTHO05D024421 5.4e-19 99.4 123 57.7
BolC1t04671H Brassica oleracea HOM05D007203 ORTHO05D020137 1.6e-18 97.8 120 55.8
BcaC04g23792 Brassica carinata HOM05D007203 ORTHO05D014981 2.7e-18 97.1 113 56.6
BraA04t16843Z Brassica rapa HOM05D007203 ORTHO05D020137 2.7e-18 97.1 120 55.8
BcaC09g48677 Brassica carinata HOM05D007203 ORTHO05D020137 7.7e-18 95.5 120 55.0
C03p35500 Brassica napus HOM05D007203 ORTHO05D011558 1.0e-17 95.1 73 71.2
C08p21920 Brassica napus HOM05D007203 ORTHO05D011558 1.7e-17 94.4 73 71.2
BcaC04g20467 Brassica carinata HOM05D007203 ORTHO05D027708 2.2e-17 94.0 111 57.7
C04p52660 Brassica napus HOM05D007203 ORTHO05D020137 5.0e-17 92.8 118 55.1
BolC1t01561H Brassica oleracea HOM05D007203 ORTHO05D020137 5.5e-16 89.4 116 55.2
BcaC04g20469 Brassica carinata HOM05D007203 ORTHO05D014981 1.2e-15 88.2 82 65.9
BcaC08g44612 Brassica carinata HOM05D007203 ORTHO05D011558 1.2e-15 88.2 65 70.8
C06p45720 Brassica napus HOM05D007203 ORTHO05D013810 2.1e-15 87.4 121 54.5
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 4.7e-15 86.3 112 53.6
BcaB02g11369 Brassica carinata HOM05D007203 ORTHO05D094245 6.1e-15 85.9 81 67.9
BcaB02g11375 Brassica carinata HOM05D007203 ORTHO05D011558 6.1e-15 85.9 143 44.8
BcaC03g15868 Brassica carinata HOM05D007203 ORTHO05D008395 6.1e-15 85.9 67 76.1
C01p48560 Brassica napus HOM05D007203 ORTHO05D011558 6.1e-15 85.9 102 56.9
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 1.0e-14 85.1 339 30.7
C04p26230 Brassica napus HOM05D004128 ORTHO05D008395 1.4e-14 84.7 68 72.1
C09p63040 Brassica napus HOM05D007203 ORTHO05D013810 1.4e-14 84.7 69 73.9
BolC4t24183H Brassica oleracea HOM05D004128 ORTHO05D008395 1.4e-14 84.7 68 72.1
A01p36010 Brassica napus HOM05D007203 ORTHO05D011558 5.2e-14 82.8 41 97.6
BolC9t57648H Brassica oleracea HOM05D007203 ORTHO05D011558 5.2e-14 82.8 41 97.6
BolC5t32659H Brassica oleracea HOM05D007203 ORTHO05D014981 8.8e-14 82.0 67 73.1
BolC6t36235H Brassica oleracea HOM05D007203 ORTHO05D011558 1.2e-13 81.6 41 95.1
A07p08910 Brassica napus HOM05D007203 ORTHO05D014981 2.6e-13 80.5 67 73.1
C03p58910 Brassica napus HOM05D007203 ORTHO05D014981 4.4e-13 79.7 67 71.6
A08p11270 Brassica napus HOM05D007203 ORTHO05D014981 5.7e-13 79.3 67 71.6
A08p11290 Brassica napus HOM05D007203 ORTHO05D014981 5.7e-13 79.3 67 70.1
C06p32870 Brassica napus HOM05D007203 ORTHO05D102649 5.7e-13 79.3 115 48.7
BolC5t32923H Brassica oleracea HOM05D007203 ORTHO05D011558 5.7e-13 79.3 41 95.1
BraA08t33122Z Brassica rapa HOM05D007203 ORTHO05D014981 5.7e-13 79.3 67 71.6
BcaB04g19338 Brassica carinata HOM05D007203 ORTHO05D011558 9.8e-13 78.6 104 48.1
C02p38520 Brassica napus HOM05D007203 ORTHO05D014981 9.8e-13 78.6 67 70.1
C06p20840 Brassica napus HOM05D007203 ORTHO05D014981 1.7e-12 77.8 65 72.3
BolC6t37271H Brassica oleracea HOM05D007203 ORTHO05D014981 1.7e-12 77.8 65 72.3
A02p26600 Brassica napus HOM05D007203 ORTHO05D020127 2.2e-12 77.4 68 66.2
C04p49980 Brassica napus HOM05D007203 ORTHO05D027555 2.2e-12 77.4 115 49.6
BraA07t28681Z Brassica rapa HOM05D007203 ORTHO05D014981 2.8e-12 77.0 138 44.2
BraA08t33125Z Brassica rapa HOM05D007203 ORTHO05D014981 8.3e-12 75.5 65 69.2
BcaB01g03085 Brassica carinata HOM05D007203 ORTHO05D011558 1.1e-11 75.1 51 74.5
C06p20830 Brassica napus HOM05D007203 ORTHO05D041891 1.1e-11 75.1 105 47.6
BolC6t37269H Brassica oleracea HOM05D007203 ORTHO05D041891 1.1e-11 75.1 105 47.6
C01p16000 Brassica napus HOM05D007203 ORTHO05D097579 2.4e-11 73.9 70 64.3
C01p15990 Brassica napus HOM05D007203 ORTHO05D011558 2.7e-10 70.5 42 81.0
C09p28920 Brassica napus HOM05D007203 ORTHO05D100065 7.7e-10 68.9 57 71.9
C04p18990 Brassica napus HOM05D002042 ORTHO05D003928 1.7e-09 67.8 88 51.1
BraA07t28682Z Brassica rapa HOM05D007203 ORTHO05D108101 3.8e-09 66.6 63 65.1
A01p28280 Brassica napus HOM05D004128 ORTHO05D017536 1.5e-08 64.7 68 63.2
C08p21900 Brassica napus HOM05D007203 ORTHO05D020127 1.5e-08 64.7 68 63.2
C09p37460 Brassica napus HOM05D004128 ORTHO05D008395 1.5e-08 64.7 68 61.8
C01p48540 Brassica napus HOM05D004128 ORTHO05D020127 2.5e-08 63.9 68 63.2
A03p58150 Brassica napus HOM05D004128 ORTHO05D008395 4.2e-08 63.2 68 61.8
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 4.2e-08 63.2 68 61.8
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 5.6e-08 62.8 91 49.5
BolC3t17978H Brassica oleracea HOM05D007203 ORTHO05D020127 7.2e-08 62.4 68 61.8
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 9.5e-08 62.0 68 61.8
BcaB05g23656 Brassica carinata HOM05D004128 ORTHO05D008395 2.1e-07 60.8 200 32.5
BcaB05g23062 Brassica carinata HOM05D004128 ORTHO05D092751 4.7e-07 59.7 114 44.7
C08p06790 Brassica napus HOM05D008062 ORTHO05D042315 6.1e-07 59.3 55 63.6
A02p15830 Brassica napus HOM05D008062 ORTHO05D008395 1.8e-06 57.8 110 40.9
A09p64590 Brassica napus HOM05D008062 ORTHO05D011707 1.8e-06 57.8 110 40.9
C02p45980 Brassica napus HOM05D008062 ORTHO05D011707 1.8e-06 57.8 110 40.9
BraA02t06440Z Brassica rapa HOM05D008062 ORTHO05D011707 1.8e-06 57.8 110 40.9
BraA07t29497Z Brassica rapa HOM05D004128 ORTHO05D017536 4.0e-06 56.6 272 35.3
A01p25700 Brassica napus HOM05D008062 ORTHO05D008395 6.8e-06 55.8 105 41.0
BcaC03g15146 Brassica carinata HOM05D004128 ORTHO05D008395 8.9e-06 55.5 119 40.3
BolC8t47741H Brassica oleracea HOM05D039310 ORTHO05D032948 8.9e-06 55.5 58 56.9
BraA01t00733Z Brassica rapa HOM05D008062 ORTHO05D011707 8.9e-06 55.5 108 39.8


User provided reference genes

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