Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01083 Brassica carinata HOM05D004230 ORTHO05D007976 2.4e-110 402.1 199 100.0
BcaC06g34422 Brassica carinata HOM05D004230 ORTHO05D007976 1.5e-30 137.1 227 43.2
BcaB05g22709 Brassica carinata HOM05D004230 ORTHO05D007976 2.5e-30 136.3 377 34.0
BcaC05g28003 Brassica carinata HOM05D004230 ORTHO05D007976 5.7e-27 125.2 271 35.8
BolC5t32761H Brassica oleracea HOM05D004230 ORTHO05D007976 5.7e-27 125.2 332 31.9
A06p45730 Brassica napus HOM05D004230 ORTHO05D007976 4.1e-25 119.0 358 32.4
BcaB06g27526 Brassica carinata HOM05D004230 ORTHO05D007976 5.6e-22 108.6 261 37.9
C02p00010 Brassica napus HOM05D004230 ORTHO05D007976 2.1e-21 106.7 104 58.7
BolC3t20706H Brassica oleracea HOM05D004230 ORTHO05D007976 1.4e-20 104.0 67 76.1
BraA06t26555Z Brassica rapa HOM05D004230 ORTHO05D007976 1.4e-20 104.0 67 76.1
A09p29770 Brassica napus HOM05D004230 ORTHO05D007976 1.2e-19 100.9 67 73.1
C05p40190 Brassica napus HOM05D004230 ORTHO05D007976 2.0e-19 100.1 67 73.1
BraA06t25864Z Brassica rapa HOM05D004230 ORTHO05D018474 2.4e-17 93.2 61 75.4
BcaB01g03013 Brassica carinata HOM05D004230 ORTHO05D007976 1.1e-14 84.3 102 51.0
BraA09t38540Z Brassica rapa HOM05D037366 ORTHO05D107879 8.0e-13 78.2 101 50.5
AL5G20550 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 3.1e-12 76.3 318 26.1
A04p10960 Brassica napus HOM05D037366 ORTHO05D042224 2.0e-11 73.6 97 49.5
BraA04t16761Z Brassica rapa HOM05D037366 ORTHO05D042224 7.5e-11 71.6 97 48.5
BraA06t27442Z Brassica rapa HOM05D004230 ORTHO05D007976 9.8e-11 71.2 45 80.0
C07p28690 Brassica napus HOM05D004230 ORTHO05D007976 1.3e-10 70.9 70 58.6
BolC7t43407H Brassica oleracea HOM05D004230 ORTHO05D007976 1.3e-10 70.9 70 58.6
C02p00020 Brassica napus HOM05D004230 ORTHO05D028081 4.9e-10 68.9 51 70.6
C05p40180 Brassica napus HOM05D035681 ORTHO05D028081 1.1e-09 67.8 71 54.9
BcaC02g08607 Brassica carinata HOM05D004230 ORTHO05D018474 4.1e-09 65.9 66 45.5
C03p81320 Brassica napus HOM05D004230 ORTHO05D028081 4.1e-09 65.9 51 68.6
C01p41050 Brassica napus HOM05D004230 ORTHO05D024011 1.3e-07 60.8 65 44.6
BolC1t04060H Brassica oleracea HOM05D004230 ORTHO05D024011 1.3e-07 60.8 65 44.6
C04p52580 Brassica napus HOM05D004230 ORTHO05D007976 2.3e-07 60.1 66 45.5
A01p32030 Brassica napus HOM05D004230 ORTHO05D024011 3.9e-07 59.3 61 44.3
BcaC09g52278 Brassica carinata HOM05D004230 ORTHO05D007976 8.6e-07 58.2 206 28.6
BolC1t02226H Brassica oleracea HOM05D004230 ORTHO05D007976 8.6e-07 58.2 206 28.6
C01p22970 Brassica napus HOM05D004230 ORTHO05D007976 2.5e-06 56.6 66 43.9
BcaC09g49346 Brassica carinata HOM05D004230 ORTHO05D024011 3.3e-06 56.2 133 31.6


User provided reference genes

Program Settings