Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.1375 Acer truncatum HOM05D059712 ORTHO05D052474 1.4e-28 129.0 70 100.0
Atru.chr2.1354 Acer truncatum HOM05D059712 ORTHO05D051701 3.1e-20 101.3 54 100.0
Atru.chr2.1356 Acer truncatum HOM05D000825 ORTHO05D002486 9.1e-12 73.2 42 88.1
Atru.chr2.1373 Acer truncatum HOM05D000825 ORTHO05D002486 9.1e-12 73.2 42 88.1
Haze_19410 Corylus avellana HOM05D000825 ORTHO05D002486 4.0e-07 57.8 42 66.7
Cfa016435 Carpinus fangiana HOM05D000825 ORTHO05D002486 6.7e-07 57.0 42 66.7
Potri.013G059000 Populus trichocarpa HOM05D000825 ORTHO05D002486 8.8e-07 56.6 42 64.3
Thecc.05G293400 Theobroma cacao HOM05D000825 ORTHO05D002486 8.8e-07 56.6 42 61.9
Lsat_1_v5_gn_6_36801 Lactuca sativa HOM05D000825 ORTHO05D002486 2.0e-06 55.5 42 59.5
TWI34G1055 Tripterygium wilfordii HOM05D000825 ORTHO05D002486 2.0e-06 55.5 44 65.9
Haze_11188 Corylus avellana HOM05D003255 ORTHO05D003705 2.6e-06 55.1 42 64.3
Haze_11194 Corylus avellana HOM05D000001 ORTHO05D000003 2.6e-06 55.1 42 64.3
Duzib128G1217 Durio zibethinus HOM05D000825 ORTHO05D002486 2.6e-06 55.1 42 57.1
Manes.08G149800 Manihot esculenta HOM05D000326 ORTHO05D002486 4.4e-06 54.3 43 60.5
Sabra13G0052500 Salix brachista HOM05D000825 ORTHO05D002486 4.4e-06 54.3 42 61.9
Gohir.A11G258450 Gossypium hirsutum HOM05D000326 ORTHO05D002486 5.7e-06 53.9 54 53.7
Gorai.007G288300 Gossypium raimondii HOM05D000326 ORTHO05D002486 7.5e-06 53.5 43 62.8
QL07p020107 Quercus lobata HOM05D000825 ORTHO05D002486 7.5e-06 53.5 43 62.8
THA.LOC104805760 Tarenaya hassleriana HOM05D000825 ORTHO05D002486 7.5e-06 53.5 42 64.3


User provided reference genes

Program Settings