Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr13.942 Acer truncatum HOM05D005719 ORTHO05D007030 1.1e-262 909.4 467 100.0
Ciclev10000979m.g Citrus clementina HOM05D005719 ORTHO05D007030 2.6e-163 579.3 489 64.6
Sabra02G0085500 Salix brachista HOM05D005719 ORTHO05D007030 1.1e-161 573.9 489 62.6
Prupe.1G540100 Prunus persica HOM05D005719 ORTHO05D007030 4.6e-160 568.5 501 61.7
Duzib093G1837 Durio zibethinus HOM05D005719 ORTHO05D007030 1.3e-159 567.0 484 63.0
MD08G1208600 Malus domestica HOM05D005719 ORTHO05D007030 1.7e-159 566.6 501 61.3
CiPaw.08G058000 Carya illinoinensis HOM05D005719 ORTHO05D007030 3.0e-159 565.8 488 62.3
QL12p040011 Quercus lobata HOM05D005719 ORTHO05D007030 3.9e-159 565.5 498 62.2
Manes.18G055200 Manihot esculenta HOM05D005719 ORTHO05D007030 6.6e-159 564.7 503 62.0
Duzib041G0544 Durio zibethinus HOM05D005719 ORTHO05D007030 1.5e-158 563.5 466 65.5
Haze_22505 Corylus avellana HOM05D005719 ORTHO05D007030 9.6e-158 560.8 516 60.5
TWI56G1147 Tripterygium wilfordii HOM05D005719 ORTHO05D007030 1.3e-157 560.5 487 63.0
vmacro04622 Vaccinium macrocarpon HOM05D005719 ORTHO05D007030 1.3e-157 560.5 487 61.4
Gohir.A05G217800 Gossypium hirsutum HOM05D005719 ORTHO05D007030 3.6e-157 558.9 491 62.7
Thecc.08G076500 Theobroma cacao HOM05D005719 ORTHO05D007030 6.2e-157 558.1 488 62.1
Gorai.009G226700 Gossypium raimondii HOM05D005719 ORTHO05D007030 1.1e-156 557.4 492 62.6
MD15G1392600 Malus domestica HOM05D005719 ORTHO05D007030 2.4e-156 556.2 499 60.7
CiPaw.07G161600 Carya illinoinensis HOM05D005719 ORTHO05D007030 1.7e-154 550.1 468 62.2
CANSAT21G2028 Cannabis sativa HOM05D005719 ORTHO05D007030 3.8e-154 548.9 493 61.5
Gohir.D05G219700 Gossypium hirsutum HOM05D005719 ORTHO05D007030 3.8e-154 548.9 489 62.6
CSS0009932 Camellia sinensis var. sinensis HOM05D005719 ORTHO05D007030 6.4e-154 548.1 497 60.4
GSVIVG01009231001 Vitis vinifera HOM05D005719 ORTHO05D007030 3.5e-152 542.3 436 64.9
TAR628G1450 Trochodendron aralioides HOM05D005719 ORTHO05D007030 4.6e-152 542.0 494 60.5
Cfa013832 Carpinus fangiana HOM05D000446 ORTHO05D000321 1.8e-151 540.0 461 62.7
Actinidia19605 Actinidia chinensis HOM05D005719 ORTHO05D007030 3.9e-151 538.9 490 60.8
RcHm_v2.0_Chr7g0233191 Rosa chinensis HOM05D005719 ORTHO05D007030 4.3e-150 535.4 499 59.5
TAR381G0820 Trochodendron aralioides HOM05D005719 ORTHO05D007030 2.9e-146 522.7 447 62.6
Phvul.009G145500 Phaseolus vulgaris HOM05D005719 ORTHO05D007030 7.1e-145 518.1 487 58.5
ClCG11G014800 Citrullus lanatus HOM05D005719 ORTHO05D007030 1.0e-143 514.2 486 58.6
Eucgr.F02170 Eucalyptus grandis HOM05D005719 ORTHO05D007030 1.8e-143 513.5 496 58.1
FvH4_5g33860 Fragaria vesca HOM05D005719 ORTHO05D007030 3.0e-143 512.7 495 57.2
arahy.Tifrunner.gnm1.ann1.SLT0HR Arachis hypogaea HOM05D005719 ORTHO05D007030 6.7e-143 511.5 495 56.2
Psat5g018640 Pisum sativum HOM05D005719 ORTHO05D007030 7.4e-142 508.1 493 55.2
Sc02g0008400 Simmondsia chinensis HOM05D005719 ORTHO05D007030 2.8e-141 506.1 488 56.1
Glyma.06G092200 Glycine max HOM05D005719 ORTHO05D007030 3.7e-141 505.8 487 57.3
Hma1.2p1_0010F.1_g006360 Hydrangea macrophylla HOM05D005719 ORTHO05D007030 3.7e-141 505.8 487 58.1
Lalb_Chr11g0064791 Lupinus albus HOM05D005719 ORTHO05D007030 3.7e-141 505.8 486 56.4
arahy.Tifrunner.gnm1.ann1.I1WLRD Arachis hypogaea HOM05D005719 ORTHO05D007030 6.2e-141 505.0 495 55.8
TPR.G12418 Trifolium pratense HOM05D005719 ORTHO05D007030 9.0e-140 501.1 489 55.6
THA.LOC104823811 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 4.5e-139 498.8 488 56.6
Glyma.04G090400 Glycine max HOM05D005719 ORTHO05D007030 1.7e-138 496.9 485 56.7
Cc10_g08220 Coffea canephora HOM05D005719 ORTHO05D007030 2.2e-138 496.5 495 55.4
Lsat_1_v5_gn_7_55820 Lactuca sativa HOM05D005719 ORTHO05D007030 5.0e-138 495.4 506 56.3
Sed0009724 Sechium edule HOM05D005719 ORTHO05D007030 8.4e-138 494.6 464 58.2
CsaV3_3G048210 Cucumis sativus L. HOM05D005719 ORTHO05D007030 1.9e-137 493.4 487 57.5
Cpa.g.sc177.3 Carica papaya HOM05D005719 ORTHO05D007030 3.2e-137 492.7 407 63.6
EL10Ac1g02246 Beta vulgaris HOM05D005719 ORTHO05D007030 9.3e-137 491.1 491 55.4
Sp2g17320 Schrenkiella parvula HOM05D005719 ORTHO05D007030 1.2e-136 490.7 491 55.6
Oeu035376.1 Olea europaea HOM05D005719 ORTHO05D007030 1.6e-136 490.3 497 53.3
Migut.C00296 Erythranthe guttata HOM05D005719 ORTHO05D007030 2.7e-136 489.6 487 54.4
Medtr3g111330 Medicago truncatula HOM05D005719 ORTHO05D007030 4.6e-136 488.8 505 54.1
ECA240G4523 Erigeron canadensis HOM05D005719 ORTHO05D007030 7.9e-136 488.0 498 55.8
THA.LOC104805699 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 7.9e-136 488.0 487 55.4
HanXRQChr03g0065451 Helianthus annuus HOM05D005719 ORTHO05D007030 1.3e-135 487.3 490 53.9
Thhalv10004086m.g Eutrema salsugineum HOM05D005719 ORTHO05D007030 3.9e-135 485.7 489 55.6
BcaC06g30902 Brassica carinata HOM05D005719 ORTHO05D007030 1.5e-134 483.8 489 55.4
COL.COLO4_35322 Corchorus olitorius HOM05D005719 ORTHO05D007030 3.3e-134 482.6 484 57.4
PGR031G2819 Punica granatum HOM05D005719 ORTHO05D007030 4.3e-134 482.3 483 56.5
FAN08G1402 Fragaria x ananassa HOM05D005719 ORTHO05D007030 5.7e-134 481.9 563 50.1
PSO700G0171 Papaver somniferum HOM05D005719 ORTHO05D007030 2.2e-133 479.9 483 55.3
Hund05222 Selenicereus undatus HOM05D005719 ORTHO05D007030 2.2e-133 479.9 479 54.7
Nitab4.5_0001608g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 3.7e-133 479.2 492 54.3
VMungo1309G0989 Vigna mungo HOM05D005719 ORTHO05D007030 4.1e-132 475.7 461 58.1
Carub.0005s0719 Capsella rubella HOM05D005719 ORTHO05D007030 5.9e-131 471.9 489 54.6
Lj1g0010479 Lotus japonicus HOM05D005719 ORTHO05D007030 1.7e-130 470.3 490 52.4
PSO761G0268 Papaver somniferum HOM05D005719 ORTHO05D007030 5.0e-130 468.8 503 52.3
AL5G18300 Arabidopsis lyrata HOM05D005719 ORTHO05D007030 5.5e-129 465.3 488 52.9
AT3G28670 Arabidopsis thaliana HOM05D005719 ORTHO05D007030 5.5e-129 465.3 490 53.3
Aa31LG2G4530 Aethionema arabicum HOM05D005719 ORTHO05D007030 1.0e-127 461.1 491 53.2
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 1.4e-127 460.7 479 53.0
TPR.G21947 Trifolium pratense HOM05D005719 ORTHO05D007030 3.0e-127 459.5 457 54.5
A06p40410 Brassica napus HOM05D005719 ORTHO05D007030 1.5e-126 457.2 494 53.2
BraA06t26959Z Brassica rapa HOM05D005719 ORTHO05D007030 1.5e-126 457.2 494 53.2
CARHR286650 Cardamine hirsuta HOM05D005719 ORTHO05D007030 2.0e-126 456.8 490 52.2
C07p37630 Brassica napus HOM05D005719 ORTHO05D007030 2.5e-126 456.4 493 54.0
BcaC06g33632 Brassica carinata HOM05D005719 ORTHO05D007030 5.7e-126 455.3 493 53.8
MSTRG.25002 Avicennia marina HOM05D005719 ORTHO05D007030 3.7e-125 452.6 495 51.7
BolC7t44279H Brassica oleracea HOM05D005719 ORTHO05D007030 6.3e-125 451.8 494 53.8
Solyc02g014380.3 Solanum lycopersicum HOM05D005719 ORTHO05D007030 6.3e-125 451.8 493 52.5
MBI16_g44752_MAGBIO Magnolia biondii HOM05D005719 ORTHO05D007030 8.2e-125 451.4 405 59.0
Sopen02g003330 Solanum pennellii HOM05D005719 ORTHO05D007030 1.4e-124 450.7 493 52.3
FAN18G0583 Fragaria x ananassa HOM05D005719 ORTHO05D007030 4.1e-124 449.1 425 57.9
Manes.05G187400 Manihot esculenta HOM05D005719 ORTHO05D007030 7.9e-120 434.9 382 60.2
Dinv44886 Davidia involucrata HOM05D005719 ORTHO05D007030 2.6e-118 429.9 394 60.2
Nn1g05685 Nelumbo nucifera HOM05D005719 ORTHO05D007030 3.7e-117 426.0 490 50.8
unitig_749.g13864 Utricularia gibba HOM05D005719 ORTHO05D000442 1.8e-116 423.7 492 48.6
CAN.G1751.8 Capsicum annuum HOM05D005719 ORTHO05D007030 1.0e-114 417.9 519 47.4
Nitab4.5_0000681g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 8.5e-114 414.8 494 50.6
AUR62035419 Chenopodium quinoa HOM05D005719 ORTHO05D007030 3.6e-112 409.5 544 46.7
SGA_v2.0_scaffold14G07072 Striga asiatica HOM05D005719 ORTHO05D007030 6.1e-112 408.7 524 46.0
CAN.G1921.11 Capsicum annuum HOM05D005719 ORTHO05D007030 8.0e-112 408.3 499 47.9
Ca_15541_v3 Cicer arietinum L. HOM05D005719 ORTHO05D007030 8.0e-112 408.3 488 49.2
Rhsim07G0214600 Rhododendron simsii HOM05D005719 ORTHO05D007030 2.3e-111 406.8 345 63.2
HPP92_028121 Vanilla planifolia HOM05D005719 ORTHO05D007030 3.0e-111 406.4 489 46.4
HPP92_020868 Vanilla planifolia HOM05D005719 ORTHO05D007030 8.8e-111 404.8 489 46.2
MELO3C003498.2 Cucumis melo HOM05D005719 ORTHO05D007030 2.8e-109 399.8 331 64.4
PGSC0003DMG400019103 Solanum tuberosum HOM05D005719 ORTHO05D007030 2.0e-99 367.1 496 46.6
Peaxi162Scf01397g00011 Petunia axillaris HOM05D005719 ORTHO05D007030 3.5e-99 366.3 337 57.9
Ah.00g000110 Amaranthus hybridus HOM05D005719 ORTHO05D007030 1.9e-97 360.5 397 50.4
Os08g0101400 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 9.5e-89 331.6 490 41.0
CDE07G0720 Ceratophyllum demersum HOM05D005719 ORTHO05D007030 6.1e-88 328.9 489 42.5
PGSC0003DMG400019007 Solanum tuberosum HOM05D005719 ORTHO05D007030 5.2e-87 325.9 476 44.5
Potri.002G108700 Populus trichocarpa HOM05D005719 ORTHO05D007030 6.4e-85 318.9 257 66.5
SalBow7G1913 Salvia bowleyana HOM05D005719 ORTHO05D007030 7.8e-83 312.0 398 45.7
Actinidia29649 Actinidia chinensis HOM05D005719 ORTHO05D007030 4.4e-78 296.2 352 49.7
Pp3c26_6510 Physcomitrium patens HOM05D005719 ORTHO05D007030 1.2e-64 251.5 499 34.7
AUR62035705 Chenopodium quinoa HOM05D005719 ORTHO05D007030 3.7e-61 240.0 286 47.2
Mapoly0053s0027 Marchantia polymorpha HOM05D005719 ORTHO05D007030 2.4e-60 237.3 429 35.9
TAR381G0292 Trochodendron aralioides HOM05D005719 ORTHO05D007030 4.6e-59 233.0 235 55.3
TAR381G1016 Trochodendron aralioides HOM05D005719 ORTHO05D007030 2.4e-55 220.7 186 65.6
BcaB04g19478 Brassica carinata HOM05D005719 ORTHO05D007030 1.3e-53 214.9 279 47.7
HanXRQChr16g0499811 Helianthus annuus HOM05D005719 ORTHO05D007030 1.3e-53 214.9 317 42.0
Os10g0188900 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 6.6e-50 202.6 270 43.7
Lju279A4T8 Lonicera japonica HOM05D005719 ORTHO05D007030 3.2e-44 183.7 156 59.6
Zm00001eb198670 Zea mays HOM05D005719 ORTHO05D007030 2.7e-43 180.6 270 41.1
ATR0144G003 Amborella trichopoda HOM05D005719 ORTHO05D007030 1.3e-42 178.3 240 44.2
SMO118G0237 Selaginella moellendorffii HOM05D005719 ORTHO05D007030 2.8e-40 170.6 418 32.5
Duzib116G0315 Durio zibethinus HOM05D005719 ORTHO05D007030 3.5e-35 153.7 113 70.8
AagrBONN_evm.TU.Sc2ySwM_369.438 Anthoceros agrestis HOM05D005719 ORTHO05D007030 5.6e-33 146.4 340 32.6
AUR62035707 Chenopodium quinoa HOM05D005719 ORTHO05D007030 1.1e-31 142.1 113 68.1
Oeu035375.1 Olea europaea HOM05D005719 ORTHO05D007030 8.4e-29 132.5 181 43.6
CBR_g38241 Chara braunii HOM05D005719 ORTHO05D007030 1.4e-28 131.7 372 26.6
COL.COLO4_23153 Corchorus olitorius HOM05D005719 ORTHO05D007030 9.3e-28 129.0 143 57.3
Hund16029 Selenicereus undatus HOM05D005719 ORTHO05D007030 6.0e-27 126.3 232 37.1
Lju170A15T24 Lonicera japonica HOM05D005719 ORTHO05D007030 7.9e-27 125.9 109 66.1
Lju170A15T23 Lonicera japonica HOM05D005719 ORTHO05D007030 3.3e-25 120.6 108 60.2
ATR0800G070 Amborella trichopoda HOM05D005719 ORTHO05D007030 2.1e-24 117.9 112 56.2
Peaxi162Scf01397g00010 Petunia axillaris HOM05D005719 ORTHO05D007030 5.9e-22 109.8 134 45.5
SEGI_36882 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 1.8e-18 98.2 118 51.7
Lju279C4T1 Lonicera japonica HOM05D005719 ORTHO05D007030 1.2e-14 85.5 109 53.2
SEGI_23985 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 1.4e-12 78.6 106 37.7
C05p32060 Brassica napus HOM05D005719 ORTHO05D007030 6.1e-11 73.2 89 55.1
BolC5t31933H Brassica oleracea HOM05D005719 ORTHO05D007030 6.1e-11 73.2 89 55.1
Cre12.g551000 Chlamydomonas reinhardtii HOM05D005719 ORTHO05D007030 1.5e-09 68.6 428 21.0


User provided reference genes

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