Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr13.1406 Acer truncatum HOM05D003443 ORTHO05D009887 2.3e-254 881.7 430 100.0
QL09p035320 Quercus lobata HOM05D003443 ORTHO05D009887 8.0e-151 537.7 436 64.0
Manes.02G161000 Manihot esculenta HOM05D003443 ORTHO05D009887 1.5e-149 533.5 429 62.7
TWI56G0082 Tripterygium wilfordii HOM05D003443 ORTHO05D009887 4.9e-148 528.5 429 61.3
GSVIVG01008903001 Vitis vinifera HOM05D003443 ORTHO05D009887 4.1e-147 525.4 426 63.1
Thecc.08G121100 Theobroma cacao HOM05D003443 ORTHO05D009887 1.2e-146 523.9 427 61.4
TAR628G0851 Trochodendron aralioides HOM05D003443 ORTHO05D009887 6.1e-143 511.5 427 60.0
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 4.0e-142 508.8 423 62.2
Prupe.1G501800 Prunus persica HOM05D003443 ORTHO05D009887 3.4e-141 505.8 432 59.3
Gohir.A05G233300 Gossypium hirsutum HOM05D003443 ORTHO05D009887 7.5e-141 504.6 426 60.8
Gorai.009G244000 Gossypium raimondii HOM05D003443 ORTHO05D009887 1.7e-140 503.4 425 60.5
FvH4_2g26511 Fragaria vesca HOM05D003443 ORTHO05D009887 1.5e-136 490.3 438 58.4
RcHm_v2.0_Chr6g0295331 Rosa chinensis HOM05D003443 ORTHO05D009887 1.2e-135 487.3 431 57.8
MD08G1168100 Malus domestica HOM05D003443 ORTHO05D009887 2.1e-135 486.5 432 58.6
QL09p036517 Quercus lobata HOM05D003443 ORTHO05D009887 8.0e-135 484.6 405 62.5
FAN15G1193 Fragaria x ananassa HOM05D002169 ORTHO05D006927 2.3e-134 483.0 427 57.6
ClCG11G015590 Citrullus lanatus HOM05D003443 ORTHO05D009887 3.1e-134 482.6 426 58.0
Sabra05G0132100 Salix brachista HOM05D003443 ORTHO05D009887 3.4e-133 479.2 445 55.5
Sed0010337 Sechium edule HOM05D003443 ORTHO05D009887 1.9e-131 473.4 426 56.3
CANSAT25G3703 Cannabis sativa HOM05D003443 ORTHO05D009887 1.6e-130 470.3 434 56.5
Hund16841 Selenicereus undatus HOM05D003443 ORTHO05D009887 2.1e-130 469.9 423 58.4
CsaV3_4G028430 Cucumis sativus L. HOM05D003443 ORTHO05D009887 3.5e-130 469.2 426 57.0
Nn5g28161 Nelumbo nucifera HOM05D003443 ORTHO05D009887 6.6e-129 464.9 427 55.5
RhsimUnG0094800 Rhododendron simsii HOM05D003443 ORTHO05D009887 1.2e-127 460.7 461 52.1
Eucgr.F03767 Eucalyptus grandis HOM05D003443 ORTHO05D009887 1.6e-127 460.3 427 55.5
MELO3C010459.2 Cucumis melo HOM05D003443 ORTHO05D009887 3.6e-127 459.1 433 56.1
Lalb_Chr10g0101921 Lupinus albus HOM05D003443 ORTHO05D009887 9.9e-125 451.1 436 53.9
VMungo0647G1328 Vigna mungo HOM05D003443 ORTHO05D009887 2.2e-124 449.9 430 54.9
Psat2g078480 Pisum sativum HOM05D003443 ORTHO05D009887 6.0e-122 441.8 431 52.9
Medtr5g059070 Medicago truncatula HOM05D003443 ORTHO05D009887 5.6e-120 435.3 426 53.1
Ca_03725_v3 Cicer arietinum L. HOM05D003443 ORTHO05D009887 4.7e-119 432.2 429 53.4
FAN27G2831 Fragaria x ananassa HOM05D003443 ORTHO05D009887 1.1e-118 431.0 394 55.3
Lj1g0008620 Lotus japonicus HOM05D003443 ORTHO05D009887 1.1e-118 431.0 431 51.0
Phvul.008G165600 Phaseolus vulgaris HOM05D003443 ORTHO05D009887 1.1e-118 431.0 432 53.7
arahy.Tifrunner.gnm1.ann1.5F0RSX Arachis hypogaea HOM05D003443 ORTHO05D009887 8.9e-118 427.9 439 50.8
arahy.Tifrunner.gnm1.ann1.JR3K98 Arachis hypogaea HOM05D003443 ORTHO05D009887 2.0e-117 426.8 439 50.6
DCAR_003542 Daucus carota HOM05D003443 ORTHO05D009887 2.6e-117 426.4 431 48.7
CAN.G48.26 Capsicum annuum HOM05D003443 ORTHO05D009887 9.9e-117 424.5 424 50.9
Migut.C01151 Erythranthe guttata HOM05D003443 ORTHO05D009887 1.9e-115 420.2 431 50.1
MSTRG.1462 Avicennia marina HOM05D003443 ORTHO05D009887 1.0e-113 414.5 430 50.2
Lsat_1_v5_gn_1_8320 Lactuca sativa HOM05D003443 ORTHO05D009887 1.7e-113 413.7 428 50.0
Duzib093G0763 Durio zibethinus HOM05D003443 ORTHO05D009887 1.5e-112 410.6 353 58.9
Lj7C333G3 Lonicera japonica HOM05D003443 ORTHO05D009887 5.6e-112 408.7 369 55.6
Nitab4.5_0002816g0090 Nicotiana tabacum HOM05D003443 ORTHO05D009887 5.6e-112 408.7 433 50.1
HanXRQChr04g0111631 Helianthus annuus HOM05D003443 ORTHO05D009887 4.0e-110 402.5 426 49.1
PGSC0003DMG400014817 Solanum tuberosum HOM05D003443 ORTHO05D009887 4.0e-110 402.5 429 49.7
Solyc03g093210.3 Solanum lycopersicum HOM05D003443 ORTHO05D009887 2.7e-106 389.8 455 47.5
TPR.G8502 Trifolium pratense HOM05D003443 ORTHO05D009887 7.8e-106 388.3 394 52.0
SalBow7G0745 Salvia bowleyana HOM05D003443 ORTHO05D009887 8.7e-105 384.8 430 47.2
Haze_00482 Corylus avellana HOM05D003443 ORTHO05D009887 1.3e-103 380.9 426 49.3
Glyma.14G162900 Glycine max HOM05D003443 ORTHO05D009887 2.8e-103 379.8 377 52.5
Nitab4.5_0010023g0010 Nicotiana tabacum HOM05D003443 ORTHO05D009887 4.8e-103 379.0 502 43.4
SalBow7G1610 Salvia bowleyana HOM05D003443 ORTHO05D009887 1.1e-102 377.9 430 46.7
ECA247G0446 Erigeron canadensis HOM05D003443 ORTHO05D009887 2.1e-98 363.6 397 48.4
Sc01g0001370 Simmondsia chinensis HOM05D003443 ORTHO05D009887 1.3e-97 360.9 384 49.7
SGA_v2.0_scaffold52G18985 Striga asiatica HOM05D003443 ORTHO05D009887 3.9e-97 359.4 430 44.7
EL10Ac1g00011 Beta vulgaris HOM05D003443 ORTHO05D009887 1.9e-96 357.1 435 47.1
AUR62004719 Chenopodium quinoa HOM05D003443 ORTHO05D009887 2.8e-95 353.2 390 48.5
Actinidia25684 Actinidia chinensis HOM05D003443 ORTHO05D009887 8.7e-89 331.6 309 54.4
Medtr5g459020 Medicago truncatula HOM05D003443 ORTHO05D009887 3.3e-88 329.7 343 51.0
vmacro00815 Vaccinium macrocarpon HOM05D003443 ORTHO05D009887 4.8e-87 325.9 454 42.7
Potri.005G174900 Populus trichocarpa HOM05D003443 ORTHO05D009887 2.4e-86 323.6 426 43.2
Oeu050896.1 Olea europaea HOM05D003443 ORTHO05D009887 5.3e-86 322.4 463 42.1
AUR62023638 Chenopodium quinoa HOM05D003443 ORTHO05D009887 1.1e-83 314.7 378 45.2
Peaxi162Scf00241g00037 Petunia axillaris HOM05D003443 ORTHO05D009887 6.3e-79 298.9 440 40.2
MBI06_g02575_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 2.2e-76 290.4 431 41.8
Aqoxy5G02443 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 2.3e-73 280.4 251 58.2
Cc10_g11010 Coffea canephora HOM05D003443 ORTHO05D009887 1.6e-66 257.7 264 51.9
Gohir.D05G235701 Gossypium hirsutum HOM05D003443 ORTHO05D009887 1.2e-61 241.5 208 57.7
Sopen03g024010 Solanum pennellii HOM05D003443 ORTHO05D009887 3.5e-61 240.0 328 42.7
ATR0684G011 Amborella trichopoda HOM05D003443 ORTHO05D009887 4.5e-53 213.0 258 41.1
MBI06_g35594_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 4.5e-53 213.0 223 50.2
Actinidia29454 Actinidia chinensis HOM05D003443 ORTHO05D009887 1.0e-52 211.8 221 49.3
Cc10_g11020 Coffea canephora HOM05D003443 ORTHO05D009887 9.1e-46 188.7 152 57.9
MBI06_g44274_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 7.5e-40 169.1 321 35.2
Lj7E334T0 Lonicera japonica HOM05D003443 ORTHO05D009887 2.0e-32 144.4 90 73.3
Os04g0450500 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D009887 2.4e-30 137.5 271 32.8
Aqoxy5G02442 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 7.3e-27 125.9 156 46.8
COL.COLO4_12190 Corchorus olitorius HOM05D003443 ORTHO05D009887 1.7e-23 114.8 65 75.4
PGSC0003DMG400021471 Solanum tuberosum HOM05D003443 ORTHO05D009887 6.4e-23 112.8 84 63.1
MBI06_g35595_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 4.6e-21 106.7 138 43.5
SEGI_24688 Sequoiadendron giganteum HOM05D003443 ORTHO05D009887 6.6e-12 76.3 182 29.7
Hma1.2p1_0248F.1_g102080 Hydrangea macrophylla HOM05D003443 ORTHO05D009887 1.6e-10 71.6 35 88.6
Migut.K01194 Erythranthe guttata HOM05D003443 ORTHO05D009887 2.8e-10 70.9 226 25.2
Zm00001eb081310 Zea mays HOM05D003443 ORTHO05D009887 7.6e-08 62.8 120 29.2


User provided reference genes

Program Settings