Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.1394 Acer truncatum HOM05D006326 ORTHO05D007589 1.3e-280 969.1 513 100.0
GSVIVG01033643001 Vitis vinifera HOM05D006326 ORTHO05D007589 1.3e-147 527.3 518 61.6
Dinv05303 Davidia involucrata HOM05D006326 ORTHO05D007589 9.3e-138 494.6 508 60.8
CiPaw.09G048500 Carya illinoinensis HOM05D006326 ORTHO05D007589 6.2e-134 481.9 505 59.4
Thecc.05G128800 Theobroma cacao HOM05D006326 ORTHO05D007589 5.3e-133 478.8 505 60.0
Dinv07946 Davidia involucrata HOM05D006326 ORTHO05D007589 3.8e-131 472.6 512 58.8
Actinidia17957 Actinidia chinensis HOM05D006326 ORTHO05D007589 6.2e-126 455.3 512 59.0
CSS0039389 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 8.4e-123 444.9 505 56.4
RcHm_v2.0_Chr6g0276151 Rosa chinensis HOM05D006326 ORTHO05D007589 3.5e-121 439.5 509 55.6
MD14G1089900 Malus domestica HOM05D006326 ORTHO05D007589 5.1e-120 435.6 503 55.3
Potri.016G036000 Populus trichocarpa HOM05D006326 ORTHO05D007589 1.5e-116 424.1 496 57.1
Ciclev10011438m.g Citrus clementina HOM05D006326 ORTHO05D007589 2.0e-116 423.7 451 58.8
Haze_20235 Corylus avellana HOM05D006326 ORTHO05D007589 8.4e-115 418.3 473 58.6
TAR623G0088 Trochodendron aralioides HOM05D006326 ORTHO05D007589 1.9e-114 417.2 532 52.3
CsaV3_4G029490 Cucumis sativus L. HOM05D006326 ORTHO05D007589 5.5e-114 415.6 493 55.6
Actinidia37880 Actinidia chinensis HOM05D006326 ORTHO05D007589 4.3e-111 406.0 455 56.7
QL07p011201 Quercus lobata HOM05D006326 ORTHO05D007589 6.3e-110 402.1 506 54.7
Gohir.D09G115200 Gossypium hirsutum HOM05D006326 ORTHO05D007589 3.1e-109 399.8 512 53.7
ClCG04G005630 Citrullus lanatus HOM05D006326 ORTHO05D007589 2.0e-108 397.1 524 52.1
Cpa.g.sc92.89 Carica papaya HOM05D006326 ORTHO05D007589 1.3e-107 394.4 514 52.7
Manes.09G004100 Manihot esculenta HOM05D006326 ORTHO05D007589 1.3e-107 394.4 448 57.1
Gorai.006G132800 Gossypium raimondii HOM05D006326 ORTHO05D007589 1.1e-106 391.3 518 52.7
COL.COLO4_37458 Corchorus olitorius HOM05D006326 ORTHO05D007589 2.5e-106 390.2 492 52.8
FAN20G2839 Fragaria x ananassa HOM05D006326 ORTHO05D007589 2.7e-105 386.7 509 51.3
FAN15G3215 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.3e-102 377.9 489 51.3
CiPaw.10G040500 Carya illinoinensis HOM05D006326 ORTHO05D007589 2.4e-101 373.6 453 56.1
Prupe.7G034100 Prunus persica HOM05D006326 ORTHO05D007589 9.1e-101 371.7 495 50.1
Potri.006G039900 Populus trichocarpa HOM05D006326 ORTHO05D007589 8.5e-99 365.2 507 51.3
FvH4_2g14070 Fragaria vesca HOM05D006326 ORTHO05D007589 7.2e-98 362.1 509 49.3
Lj5g0016845 Lotus japonicus HOM05D006326 ORTHO05D007589 9.4e-98 361.7 504 51.2
Duzib128G1973 Durio zibethinus HOM05D006326 ORTHO05D007589 6.1e-97 359.0 388 56.4
Ca_05361_v3 Cicer arietinum L. HOM05D006326 ORTHO05D007589 1.5e-90 337.8 504 49.8
Sabra06G0026900 Salix brachista HOM05D006326 ORTHO05D007589 7.2e-90 335.5 503 49.1
SabraUnG0002500 Salix brachista HOM05D006326 ORTHO05D007589 7.2e-90 335.5 503 49.1
Oeu057785.1 Olea europaea HOM05D006326 ORTHO05D007589 1.1e-87 328.2 497 47.5
Oeu057784.1 Olea europaea HOM05D006326 ORTHO05D007589 9.7e-87 325.1 501 47.5
Oeu022970.2 Olea europaea HOM05D006326 ORTHO05D007589 8.2e-86 322.0 520 45.6
TWI74G0746 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 1.2e-84 318.2 455 49.9
SalBow6G7225 Salvia bowleyana HOM05D006326 ORTHO05D007589 3.5e-84 316.6 496 47.8
Nitab4.5_0002982g0070 Nicotiana tabacum HOM05D006326 ORTHO05D007589 4.5e-84 316.2 511 47.6
Nitab4.5_0000237g0060 Nicotiana tabacum HOM05D006326 ORTHO05D007589 1.0e-83 315.1 513 46.0
Eucgr.B03116 Eucalyptus grandis HOM05D006326 ORTHO05D007589 1.3e-83 314.7 457 47.3
Gohir.A09G118300 Gossypium hirsutum HOM05D006326 ORTHO05D007589 2.2e-83 313.9 457 49.5
Peaxi162Scf00076g00325 Petunia axillaris HOM05D006326 ORTHO05D007589 2.5e-82 310.5 541 44.2
CAN.G51.3 Capsicum annuum HOM05D006326 ORTHO05D007589 4.2e-82 309.7 500 45.6
Aqoxy1G00376 Aquilegia oxysepala HOM05D006326 ORTHO05D007589 1.2e-81 308.1 517 45.8
Lalb_Chr02g0156611 Lupinus albus HOM05D006326 ORTHO05D007589 6.1e-81 305.8 508 46.7
FAN24G3485 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.0e-80 305.1 457 47.0
DCAR_013645 Daucus carota HOM05D002003 ORTHO05D002037 6.8e-80 302.4 506 46.8
Glyma.02G166100 Glycine max HOM05D006326 ORTHO05D007589 1.5e-79 301.2 452 47.8
Phvul.007G233400 Phaseolus vulgaris HOM05D006326 ORTHO05D007589 2.6e-79 300.4 508 45.3
MELO3C019097.2 Cucumis melo HOM05D006326 ORTHO05D007589 1.3e-78 298.1 441 48.8
arahy.Tifrunner.gnm1.ann1.Z1KKER Arachis hypogaea HOM05D006326 ORTHO05D007589 3.7e-78 296.6 508 44.3
CANSAT64G1393 Cannabis sativa HOM05D006326 ORTHO05D007589 1.1e-77 295.0 456 47.8
Psat6g129480 Pisum sativum HOM05D006326 ORTHO05D007589 3.1e-77 293.5 509 46.0
MSTRG.19798 Avicennia marina HOM05D006326 ORTHO05D007589 1.2e-76 291.6 510 45.9
arahy.Tifrunner.gnm1.ann1.0NJ1V1 Arachis hypogaea HOM05D006326 ORTHO05D007589 5.9e-76 289.3 505 44.4
VMungo0720G1800 Vigna mungo HOM05D006326 ORTHO05D007589 3.8e-75 286.6 463 46.9
Dinv01681 Davidia involucrata HOM05D006326 ORTHO05D007589 2.3e-72 277.3 397 50.9
TWI53G1954 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 4.0e-72 276.6 449 47.2
Hma1.2p1_0252F.1_g102780 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 9.8e-71 271.9 435 44.6
ATR0317G072 Amborella trichopoda HOM05D006326 ORTHO05D007589 2.0e-68 264.2 552 40.8
Glyma.10G102200 Glycine max HOM05D006326 ORTHO05D007589 7.7e-68 262.3 454 44.7
Medtr1g050510 Medicago truncatula HOM05D006326 ORTHO05D007589 1.9e-66 257.7 491 44.0
Rhsim03G0036800 Rhododendron simsii HOM05D006326 ORTHO05D007589 4.3e-66 256.5 647 36.8
CSS0038712 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 4.7e-65 253.1 363 49.0
Nn7g36809 Nelumbo nucifera HOM05D006326 ORTHO05D007589 1.4e-64 251.5 442 44.6
Sopen12g010520 Solanum pennellii HOM05D006326 ORTHO05D007589 1.4e-64 251.5 448 44.2
vmacro07781 Vaccinium macrocarpon HOM05D006326 ORTHO05D007589 5.2e-64 249.6 509 41.5
Aa31LG10G11560 Aethionema arabicum HOM05D006326 ORTHO05D007589 1.5e-63 248.1 528 39.8
SGA_v2.0_scaffold69G23160 Striga asiatica HOM05D006326 ORTHO05D007589 4.1e-61 240.0 500 40.8
Sed0018260 Sechium edule HOM05D006326 ORTHO05D007589 1.6e-60 238.0 399 46.1
Sp5g05840 Schrenkiella parvula HOM05D006326 ORTHO05D007589 1.0e-59 235.3 508 38.8
unitig_60.g25479 Utricularia gibba HOM05D006326 ORTHO05D007589 8.6e-59 232.3 497 42.1
AUR62030307 Chenopodium quinoa HOM05D006326 ORTHO05D007589 2.5e-58 230.7 508 39.8
AUR62018355 Chenopodium quinoa HOM05D006326 ORTHO05D007589 2.1e-57 227.6 510 40.0
CARHR166860 Cardamine hirsuta HOM05D006326 ORTHO05D007589 1.8e-56 224.6 506 38.1
Migut.J01646 Erythranthe guttata HOM05D006326 ORTHO05D007589 3.1e-56 223.8 443 41.3
Hund19089 Selenicereus undatus HOM05D006326 ORTHO05D007589 6.8e-56 222.6 545 39.3
HPP92_019182 Vanilla planifolia HOM05D006326 ORTHO05D007589 2.0e-55 221.1 510 39.6
Lsat_1_v5_gn_9_29721 Lactuca sativa HOM05D006326 ORTHO05D007589 5.8e-55 219.5 517 40.2
Solyc12g020000.3 Solanum lycopersicum HOM05D006326 ORTHO05D007589 1.3e-54 218.4 465 41.1
Cc06_g19610 Coffea canephora HOM05D006326 ORTHO05D007589 1.7e-51 208.0 456 37.9
Carub.0005s2347 Capsella rubella HOM05D006326 ORTHO05D007589 6.6e-51 206.1 511 38.9
AL5G38090 Arabidopsis lyrata HOM05D006326 ORTHO05D007589 9.5e-50 202.2 508 36.6
ECA247G0820 Erigeron canadensis HOM05D006326 ORTHO05D007589 8.1e-49 199.1 503 38.0
EL10Ac3g07247 Beta vulgaris HOM05D006326 ORTHO05D007589 9.8e-47 192.2 507 36.7
PSO339G2802 Papaver somniferum HOM05D006326 ORTHO05D007589 3.7e-46 190.3 466 39.5
PSO384G3095 Papaver somniferum HOM05D006326 ORTHO05D007589 3.7e-46 190.3 459 39.9
Sc13g0001090 Simmondsia chinensis HOM05D006326 ORTHO05D007589 3.2e-45 187.2 457 38.5
Ah.13g076820 Amaranthus hybridus HOM05D002003 ORTHO05D002037 1.6e-44 184.9 506 36.2
SGA_v2.0_scaffold1000G53781 Striga asiatica HOM05D006326 ORTHO05D007589 6.0e-44 183.0 311 43.1
BcaC07g40122 Brassica carinata HOM05D006326 ORTHO05D007589 1.7e-43 181.4 492 36.8
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 1.7e-43 181.4 490 37.3
SEGI_11590 Sequoiadendron giganteum HOM05D006326 ORTHO05D007589 3.3e-42 177.2 579 34.2
Hma1.2p1_0975F.1_g243130 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 4.3e-42 176.8 347 41.8
CDE04G2458 Ceratophyllum demersum HOM05D006326 ORTHO05D007589 3.6e-41 173.7 169 58.6
THA.LOC104815890 Tarenaya hassleriana HOM05D006326 ORTHO05D007589 6.2e-41 172.9 454 35.9
Thhalv10005957m.g Eutrema salsugineum HOM05D006326 ORTHO05D007589 8.1e-41 172.6 459 36.6
Hma1.2p1_0975F.1_g243140 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 1.1e-40 172.2 343 41.7
HanXRQChr15g0491141 Helianthus annuus HOM05D006326 ORTHO05D007589 5.2e-40 169.9 279 46.6
BolC8t50813H Brassica oleracea HOM05D006326 ORTHO05D007589 1.1e-37 162.2 342 40.1
SGA_v2.0_scaffold66G22355 Striga asiatica HOM05D006326 ORTHO05D007589 2.1e-36 157.9 146 57.5
unitig_0.g603 Utricularia gibba HOM05D006326 ORTHO05D007589 3.0e-35 154.1 219 49.8
BcaC07g39981 Brassica carinata HOM05D006326 ORTHO05D007589 6.6e-35 152.9 350 38.3
TPR.G7607 Trifolium pratense HOM05D006326 ORTHO05D007589 8.1e-33 146.0 510 34.3
Pp3c14_4840 Physcomitrium patens HOM05D006326 ORTHO05D007589 1.1e-32 145.6 138 60.1
PGR142G2735 Punica granatum HOM05D006326 ORTHO05D007589 1.8e-32 144.8 452 33.8
Mapoly0069s0088 Marchantia polymorpha HOM05D006326 ORTHO05D007589 1.2e-31 142.1 199 49.2
Medtr0722s0010 Medicago truncatula HOM05D006326 ORTHO05D007589 5.8e-23 113.2 78 78.2
Pp3c1_21670 Physcomitrium patens HOM05D006326 ORTHO05D007589 4.2e-21 107.1 114 53.5
Actinidia01833 Actinidia chinensis HOM05D006326 ORTHO05D007589 5.4e-21 106.7 75 77.3
SMO351G0508 Selaginella moellendorffii HOM05D006326 ORTHO05D007589 2.1e-20 104.8 145 46.9
SGA_v2.0_scaffold66G22262 Striga asiatica HOM05D006326 ORTHO05D007589 1.0e-19 102.4 500 32.0
AagrBONN_evm.TU.Sc2ySwM_344.979 Anthoceros agrestis HOM05D006326 ORTHO05D007589 3.9e-19 100.5 622 29.6
A09p49570 Brassica napus HOM05D006326 ORTHO05D007589 1.1e-18 99.0 299 33.1
BraA09t40410Z Brassica rapa HOM05D006326 ORTHO05D007589 1.1e-18 99.0 299 33.1
Zm00001eb185630 Zea mays HOM05D006326 ORTHO05D007589 1.5e-18 98.6 461 30.6
CSS0022371 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 2.4e-16 91.3 63 71.4
CBR_g50470 Chara braunii HOM05D006326 ORTHO05D007589 2.2e-14 84.7 318 32.4
Actinidia01832 Actinidia chinensis HOM05D006326 ORTHO05D007589 2.9e-14 84.3 196 36.2
SGA_v2.0_scaffold66G22360 Striga asiatica HOM05D006326 ORTHO05D007589 8.2e-09 66.2 331 32.9
Mapoly0021s0060 Marchantia polymorpha HOM05D006326 ORTHO05D007589 2.6e-07 61.2 107 39.3
AT3G56720 Arabidopsis thaliana HOM05D006326 ORTHO05D007589 1.3e-06 58.9 404 28.2


User provided reference genes

Program Settings