Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G03959 Aquilegia oxysepala HOM05D001329 ORTHO05D004946 0.0e+00 1317.0 682 100.0
TAR626G1508 Trochodendron aralioides HOM05D001329 ORTHO05D004946 1.6e-238 829.7 698 64.9
TAR626G1659 Trochodendron aralioides HOM05D001329 ORTHO05D004946 4.7e-238 828.2 698 65.0
Nn8g39015 Nelumbo nucifera HOM05D001329 ORTHO05D004946 3.6e-222 775.4 712 62.2
Potri.001G191200 Populus trichocarpa HOM05D001329 ORTHO05D004946 8.4e-203 711.1 624 63.5
Eucgr.J02692 Eucalyptus grandis HOM05D001329 ORTHO05D004946 1.6e-201 706.8 600 63.8
GSVIVG01016954001 Vitis vinifera HOM05D001329 ORTHO05D004946 2.1e-201 706.4 493 74.0
Eucgr.J02926 Eucalyptus grandis HOM05D001329 ORTHO05D004946 6.0e-201 704.9 600 63.7
Nitab4.5_0004969g0080 Nicotiana tabacum HOM05D001329 ORTHO05D004946 6.6e-200 701.4 556 66.9
PSO478G0947 Papaver somniferum HOM05D001329 ORTHO05D004946 1.1e-199 700.7 501 73.9
QL05p019057 Quercus lobata HOM05D001329 ORTHO05D004946 1.1e-199 700.7 489 72.6
TWI18G0587 Tripterygium wilfordii HOM05D001329 ORTHO05D004946 2.5e-199 699.5 711 57.4
Peaxi162Scf00038g01146 Petunia axillaris HOM05D001329 ORTHO05D004946 1.6e-198 696.8 541 67.3
CAN.G1143.24 Capsicum annuum HOM05D001329 ORTHO05D004946 4.8e-198 695.3 521 68.9
Nitab4.5_0005085g0040 Nicotiana tabacum HOM05D001329 ORTHO05D004946 4.8e-198 695.3 556 66.7
Ciclev10025165m.g Citrus clementina HOM05D001329 ORTHO05D004946 1.8e-197 693.3 551 67.2
MBI02_g35318_MAGBIO Magnolia biondii HOM05D001329 ORTHO05D004946 3.1e-197 692.6 672 58.2
Sopen03g039950 Solanum pennellii HOM05D001329 ORTHO05D004946 4.0e-197 692.2 522 68.2
PGSC0003DMG400002521 Solanum tuberosum HOM05D001329 ORTHO05D004946 4.0e-197 692.2 524 68.3
Solyc03g121120.4 Solanum lycopersicum HOM05D001329 ORTHO05D004946 9.0e-197 691.0 522 68.2
PGR102G1644 Punica granatum HOM05D001329 ORTHO05D004946 9.9e-196 687.6 692 57.2
PSO782G0993 Papaver somniferum HOM05D001329 ORTHO05D004946 3.8e-195 685.6 682 57.3
MD17G1180500 Malus domestica HOM05D001329 ORTHO05D004946 4.9e-195 685.3 702 57.1
THA.LOC104803142 Tarenaya hassleriana HOM05D001329 ORTHO05D004946 6.4e-195 684.9 599 61.6
Thecc.06G102200 Theobroma cacao HOM05D001329 ORTHO05D004946 6.4e-195 684.9 605 62.0
Cc04_g02430 Coffea canephora HOM05D001329 ORTHO05D004946 1.9e-194 683.3 484 72.7
Lsat_1_v5_gn_4_98041 Lactuca sativa HOM05D001329 ORTHO05D004946 9.3e-194 681.0 475 72.6
Sc12g0010100 Simmondsia chinensis HOM05D001329 ORTHO05D004946 1.8e-192 676.8 675 55.3
ClCG07G013420 Citrullus lanatus HOM05D001329 ORTHO05D004946 1.5e-191 673.7 687 55.3
ClCG07G013460 Citrullus lanatus HOM05D001329 ORTHO05D004946 1.5e-191 673.7 687 55.3
arahy.Tifrunner.gnm1.ann1.KL0FMA Arachis hypogaea HOM05D001329 ORTHO05D002618 5.6e-191 671.8 484 71.5
Duzib235G0146 Durio zibethinus HOM05D001329 ORTHO05D004946 1.6e-190 670.2 683 56.5
Medtr8g014670 Medicago truncatula HOM05D001329 ORTHO05D004946 1.1e-189 667.5 515 67.2
Gorai.011G070300 Gossypium raimondii HOM05D001329 ORTHO05D004946 2.4e-189 666.4 592 61.7
HanXRQChr05g0139791 Helianthus annuus HOM05D001329 ORTHO05D004946 5.3e-189 665.2 516 66.9
TPR.G15143 Trifolium pratense HOM05D001329 ORTHO05D004946 5.3e-189 665.2 521 67.6
ATR0705G162 Amborella trichopoda HOM05D001329 ORTHO05D004946 9.0e-189 664.5 535 65.0
Aa31LG3G5830 Aethionema arabicum HOM05D001329 ORTHO05D004946 1.5e-188 663.7 492 68.3
Psat4g196800 Pisum sativum HOM05D001329 ORTHO05D004946 2.0e-188 663.3 488 69.7
Sed0006591 Sechium edule HOM05D001329 ORTHO05D004946 2.0e-188 663.3 491 69.0
CiPaw.01G230000 Carya illinoinensis HOM05D001329 ORTHO05D004946 7.6e-188 661.4 545 65.9
Phvul.010G143800 Phaseolus vulgaris HOM05D001329 ORTHO05D004946 9.9e-188 661.0 488 69.7
CANSAT56G2668 Cannabis sativa HOM05D001329 ORTHO05D004946 3.8e-187 659.1 682 55.3
Lalb_Chr04g0263001 Lupinus albus HOM05D001329 ORTHO05D004946 1.1e-186 657.5 507 67.3
Manes.11G031600 Manihot esculenta HOM05D001329 ORTHO05D004946 1.1e-186 657.5 708 54.5
Migut.I00963 Erythranthe guttata HOM05D001329 ORTHO05D004946 2.5e-186 656.4 683 56.2
VMungo0331G1514 Vigna mungo HOM05D001329 ORTHO05D004946 7.1e-186 654.8 483 69.2
Glyma.08G199700 Glycine max HOM05D001329 ORTHO05D004946 1.2e-185 654.1 490 70.0
Prupe.3G056500 Prunus persica HOM05D001329 ORTHO05D004946 3.5e-185 652.5 631 59.9
Rhsim08G0228700 Rhododendron simsii HOM05D001329 ORTHO05D004946 1.3e-184 650.6 779 51.5
Carub.0008s1040 Capsella rubella HOM05D001329 ORTHO05D004946 2.3e-184 649.8 497 65.8
Ah.01g017270 Amaranthus hybridus HOM05D001329 ORTHO05D004946 3.0e-184 649.4 517 65.2
arahy.Tifrunner.gnm1.ann1.B6KHKZ Arachis hypogaea HOM05D001329 ORTHO05D002618 5.1e-184 648.7 466 71.7
vmacro18841 Vaccinium macrocarpon HOM05D001329 ORTHO05D004946 1.5e-183 647.1 716 54.3
AL8G24420 Arabidopsis lyrata HOM05D001329 ORTHO05D004946 7.4e-183 644.8 510 64.7
BcaC01g04813 Brassica carinata HOM05D001329 ORTHO05D004946 7.4e-183 644.8 493 66.3
A03p27790 Brassica napus HOM05D001329 ORTHO05D004946 1.3e-182 644.0 524 63.5
BraA03t11990Z Brassica rapa HOM05D001329 ORTHO05D004946 1.3e-182 644.0 524 63.5
AT5G50340 Arabidopsis thaliana HOM05D001329 ORTHO05D004946 2.1e-182 643.3 493 65.7
Sp6g12440 Schrenkiella parvula HOM05D001329 ORTHO05D004946 2.8e-182 642.9 497 65.6
BolC3t15673H Brassica oleracea HOM05D001329 ORTHO05D004946 8.2e-182 641.3 499 65.5
C03p33520 Brassica napus HOM05D001329 ORTHO05D004946 1.1e-181 641.0 499 65.5
Ca_23279_v3 Cicer arietinum L. HOM05D001329 ORTHO05D004946 1.1e-181 641.0 497 68.2
RcHm_v2.0_Chr2g0141101 Rosa chinensis HOM05D001329 ORTHO05D004946 1.8e-181 640.2 685 55.9
Dinv30424 Davidia involucrata HOM05D001329 ORTHO05D004946 4.0e-181 639.0 591 62.1
COL.COLO4_30535 Corchorus olitorius HOM05D001329 ORTHO05D004946 2.6e-180 636.3 599 57.1
FvH4_6g32620 Fragaria vesca HOM05D001329 ORTHO05D004946 5.8e-180 635.2 558 61.5
unitig_88.g27600 Utricularia gibba HOM05D001329 ORTHO05D004946 7.6e-180 634.8 530 63.6
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 1.7e-179 633.6 525 64.0
Sabra01G0150400 Salix brachista HOM05D001329 ORTHO05D004946 2.9e-179 632.9 750 52.0
EL10Ac9g21183 Beta vulgaris HOM05D001329 ORTHO05D004946 1.9e-178 630.2 536 63.4
Thhalv10013055m.g Eutrema salsugineum HOM05D001329 ORTHO05D004946 9.3e-178 627.9 498 64.7
Gohir.A10G064700 Gossypium hirsutum HOM05D001329 ORTHO05D004946 4.6e-177 625.5 595 58.7
Lalb_Chr24g0396201 Lupinus albus HOM05D001329 ORTHO05D004946 4.5e-172 609.0 490 64.5
Os06g0151600 Oryza sativa ssp. japonica HOM05D001329 ORTHO05D004946 4.5e-172 609.0 480 64.8
AUR62031953 Chenopodium quinoa HOM05D001329 ORTHO05D004946 1.3e-171 607.4 586 56.7
MELO3C013011.2 Cucumis melo HOM05D001329 ORTHO05D004946 1.7e-171 607.1 685 52.6
TPR.G6578 Trifolium pratense HOM05D001329 ORTHO05D004946 2.2e-171 606.7 522 60.7
CsaV3_3G023430 Cucumis sativus L. HOM05D001329 ORTHO05D004946 6.5e-171 605.1 568 59.2
BcaB01g02899 Brassica carinata HOM05D001329 ORTHO05D004946 5.5e-170 602.1 485 64.3
Glyma.15G021000 Glycine max HOM05D001329 ORTHO05D004946 9.4e-170 601.3 546 59.2
Phvul.005G165000 Phaseolus vulgaris HOM05D001329 ORTHO05D004946 2.1e-169 600.1 546 58.1
GSVIVG01016953001 Vitis vinifera HOM05D001329 ORTHO05D004946 2.1e-169 600.1 545 62.4
Lj3g0004043 Lotus japonicus HOM05D001329 ORTHO05D004946 6.1e-169 598.6 541 59.0
arahy.Tifrunner.gnm1.ann1.V5Z0HR Arachis hypogaea HOM05D001329 ORTHO05D004946 1.3e-166 590.9 526 58.7
VMungo1080G1498 Vigna mungo HOM05D001329 ORTHO05D004946 2.2e-166 590.1 483 62.1
Medtr2g100640 Medicago truncatula HOM05D001329 ORTHO05D004946 4.8e-166 589.0 547 57.6
Hund07630 Selenicereus undatus HOM05D001329 ORTHO05D004946 5.9e-164 582.0 568 57.0
FAN05G0851 Fragaria x ananassa HOM05D001329 ORTHO05D004946 1.1e-162 577.8 557 58.3
SGA_v2.0_scaffold45G16999 Striga asiatica HOM05D001329 ORTHO05D004946 2.1e-161 573.5 515 61.4
SalBow2G1072 Salvia bowleyana HOM05D001329 ORTHO05D004946 6.7e-160 568.5 693 50.8
Lj3g0020598 Lotus japonicus HOM05D001329 ORTHO05D004946 1.3e-158 564.3 392 74.7
DCAR_007591 Daucus carota HOM05D001329 ORTHO05D004946 9.1e-157 558.1 608 53.1
SGA_v2.0_scaffold265G46056 Striga asiatica HOM05D001329 ORTHO05D004946 6.1e-153 545.4 524 58.4
Mapoly0008s0091 Marchantia polymorpha HOM05D001329 ORTHO05D004946 3.9e-152 542.7 511 56.4
Gohir.D10G066200 Gossypium hirsutum HOM05D001329 ORTHO05D004946 7.0e-149 531.9 391 71.4
Ca_01173_v3 Cicer arietinum L. HOM05D001329 ORTHO05D004946 1.6e-148 530.8 528 56.2
Lj9C514G19 Lonicera japonica HOM05D001329 ORTHO05D004946 5.2e-144 515.8 428 66.4
Pp3c1_36770 Physcomitrium patens HOM05D001329 ORTHO05D004946 1.8e-141 507.3 501 53.7
SEGI_18109 Sequoiadendron giganteum HOM05D001329 ORTHO05D004946 2.7e-140 503.4 383 65.5
FAN14G3013 Fragaria x ananassa HOM05D001329 ORTHO05D004946 4.5e-140 502.7 489 58.3
AUR62022239 Chenopodium quinoa HOM05D001329 ORTHO05D004946 3.2e-138 496.5 549 50.6
Psat5g295200 Pisum sativum HOM05D001329 ORTHO05D004946 2.6e-135 486.9 467 57.4
Actinidia32112 Actinidia chinensis HOM05D001329 ORTHO05D004946 9.8e-127 458.4 300 79.0
Zm00001eb270700 Zea mays HOM05D001329 ORTHO05D004946 2.2e-126 457.2 361 64.5
SMO146G0024 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 8.3e-126 455.3 488 51.2
VMungo1080G0220 Vigna mungo HOM05D001329 ORTHO05D004946 1.3e-123 448.0 465 53.5
Atru.chr1.3485 Acer truncatum HOM05D001329 ORTHO05D004946 2.6e-119 433.7 308 72.1
CBR_g52747 Chara braunii HOM05D001329 ORTHO05D004946 6.8e-112 409.1 529 44.8
AUR62022260 Chenopodium quinoa HOM05D001329 ORTHO05D004946 9.2e-109 398.7 478 50.0
CDE02G2442 Ceratophyllum demersum HOM05D001329 ORTHO05D004946 4.0e-104 383.3 317 61.8
AagrBONN_evm.TU.Sc2ySwM_340.358 Anthoceros agrestis HOM05D001329 ORTHO05D004946 4.4e-103 379.8 369 55.3
MCO02G474 Micromonas commoda HOM05D001329 ORTHO05D004946 2.3e-99 367.5 492 43.3
arahy.Tifrunner.gnm1.ann1.VU8J7C Arachis hypogaea HOM05D001329 ORTHO05D004946 5.6e-98 362.8 497 44.5
CSS0007570 Camellia sinensis var. sinensis HOM05D001329 ORTHO05D004946 4.0e-96 356.7 319 61.4
CSS0049032 Camellia sinensis var. sinensis HOM05D001329 ORTHO05D004946 8.4e-94 349.0 281 67.6
PRCOL_00001245 Prasinoderma coloniale HOM05D001329 ORTHO05D004946 2.3e-91 340.9 557 39.1
Ah.16g103270 Amaranthus hybridus HOM05D001329 ORTHO05D004946 1.6e-89 334.7 267 64.8
Psat5g239480 Pisum sativum HOM05D001329 ORTHO05D004946 1.3e-86 325.1 327 57.5
Cpa.g.sc25.37 Carica papaya HOM05D001329 ORTHO05D004946 1.2e-84 318.5 195 82.6
CARHR258160 Cardamine hirsuta HOM05D001329 ORTHO05D004946 3.5e-84 317.0 268 61.6
CSS0047870 Camellia sinensis var. sinensis HOM05D001329 ORTHO05D004946 7.9e-84 315.8 414 48.8
Haze_15874 Corylus avellana HOM05D001329 ORTHO05D004946 3.9e-83 313.5 306 56.5
Haze_15870 Corylus avellana HOM05D001329 ORTHO05D004946 3.3e-82 310.5 306 55.9
HPP92_003950 Vanilla planifolia HOM05D001329 ORTHO05D004946 1.3e-78 298.5 260 61.5
Actinidia21724 Actinidia chinensis HOM05D001329 ORTHO05D004946 2.4e-64 251.1 385 43.6
CANSAT56G4024 Cannabis sativa HOM05D001329 ORTHO05D004946 5.3e-64 250.0 192 67.7
Cre07.g317908 Chlamydomonas reinhardtii HOM05D001329 ORTHO05D004946 5.8e-63 246.5 655 30.8
AL58U10020 Arabidopsis lyrata HOM05D001329 ORTHO05D004946 7.6e-63 246.1 194 62.9
RcHm_v2.0_Chr2g0141091 Rosa chinensis HOM05D001329 ORTHO05D004946 1.3e-62 245.4 242 58.7
SHI11143 Sapria himalayana HOM05D000023 ORTHO05D000014 1.1e-61 242.3 470 36.6
CDE02G0018 Ceratophyllum demersum HOM05D001329 ORTHO05D004946 5.5e-61 240.0 178 70.2
SMO173G0075 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 1.2e-55 222.2 266 48.1
SMO173G0086 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 3.6e-52 210.7 244 48.8
SMO173G0029 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 4.6e-52 210.3 245 49.0
CANSAT56G3773 Cannabis sativa HOM05D001329 ORTHO05D004946 2.3e-51 208.0 155 70.3
Lsat_1_v5_gn_1_63401 Lactuca sativa HOM05D001329 ORTHO05D004946 6.7e-51 206.5 147 74.1
Lsat_1_v5_gn_9_94461 Lactuca sativa HOM05D001329 ORTHO05D004946 1.2e-47 195.7 129 76.7
Haze_15873 Corylus avellana HOM05D001329 ORTHO05D004946 2.3e-43 181.4 157 65.6
Oeu063750.1 Olea europaea HOM05D001329 ORTHO05D004946 3.3e-42 177.6 117 74.4
SMO146G0193 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 1.5e-37 162.2 228 44.7
SMO173G0090 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 2.7e-36 157.9 239 41.4
SEGI_08653 Sequoiadendron giganteum HOM05D001329 ORTHO05D004946 5.7e-34 150.2 169 48.5
PSO675G5297 Papaver somniferum HOM05D001329 ORTHO05D004946 3.8e-30 137.5 253 38.7
Haze_15869 Corylus avellana HOM05D001329 ORTHO05D004946 5.0e-30 137.1 150 56.0
Psat5g295400 Pisum sativum HOM05D001329 ORTHO05D004946 1.0e-27 129.4 171 42.1
Glyma.13G353300 Glycine max HOM05D001329 ORTHO05D004946 3.0e-27 127.9 119 55.5
Hma1.2p1_0430F.1_g151230 Hydrangea macrophylla HOM05D001329 ORTHO05D004946 3.0e-27 127.9 289 33.6
Cpa.g.sc25.35 Carica papaya HOM05D001329 ORTHO05D004946 1.0e-19 102.8 239 33.1
Eucgr.G00548 Eucalyptus grandis HOM05D001329 ORTHO05D004946 6.3e-17 93.6 59 79.7
arahy.Tifrunner.gnm1.ann1.3W2ZUL Arachis hypogaea HOM05D001329 ORTHO05D010271 2.4e-16 91.7 74 63.5
Gohir.A05G129875 Gossypium hirsutum HOM05D001329 ORTHO05D004946 1.2e-15 89.4 69 62.3
PGR102G0501 Punica granatum HOM05D001329 ORTHO05D004946 1.6e-15 89.0 141 40.4
SHI11148 Sapria himalayana HOM05D000105 ORTHO05D000023 1.0e-14 86.3 120 43.3
Cpa.g.sc2949.1 Carica papaya HOM05D001329 ORTHO05D004946 2.9e-14 84.7 51 80.4
SMO173G0016 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 1.6e-12 79.0 73 49.3
Cfa015409 Carpinus fangiana HOM05D007753 ORTHO05D009385 4.7e-12 77.4 76 52.6
SHI11147 Sapria himalayana HOM05D000105 ORTHO05D000023 1.5e-10 72.4 81 49.4
SMO173G0061 Selaginella moellendorffii HOM05D001549 ORTHO05D003098 1.5e-10 72.4 49 67.3
Cpa.g.c44864 Carica papaya HOM05D001329 ORTHO05D004946 3.4e-10 71.2 51 62.7
SalBow8G0867 Salvia bowleyana HOM05D001329 ORTHO05D004946 3.4e-10 71.2 122 38.5
arahy.Tifrunner.gnm1.ann1.R9IHKK Arachis hypogaea HOM05D001329 ORTHO05D010271 4.4e-10 70.9 52 69.2
Glyma.08G248800 Glycine max HOM05D001329 ORTHO05D004946 9.8e-10 69.7 54 72.2
BcaB01g06145 Brassica carinata HOM05D001329 ORTHO05D004946 2.2e-09 68.6 43 65.1
C04p54240 Brassica napus HOM05D001329 ORTHO05D004946 2.9e-09 68.2 109 38.5
arahy.Tifrunner.gnm1.ann1.H8VH8W Arachis hypogaea HOM05D008137 ORTHO05D010271 4.9e-09 67.4 51 62.7
Oeu043914.1 Olea europaea HOM05D001329 ORTHO05D004946 6.4e-09 67.0 51 58.8
BcaC02g08434 Brassica carinata HOM05D001329 ORTHO05D004946 8.3e-09 66.6 43 62.8
RcHm_v2.0_Chr2g0141071 Rosa chinensis HOM05D001329 ORTHO05D004946 3.2e-08 64.7 53 58.5
arahy.Tifrunner.gnm1.ann1.6Z8QT9 Arachis hypogaea HOM05D001329 ORTHO05D010271 1.0e-06 59.7 52 59.6
arahy.Tifrunner.gnm1.ann1.4Z5MNN Arachis hypogaea HOM05D001329 ORTHO05D004946 3.0e-06 58.2 27 96.3


User provided reference genes

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