Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01846 Aquilegia oxysepala HOM05D004036 ORTHO05D004576 4.0e-84 314.7 157 100.0
Ciclev10009480m.g Citrus clementina HOM05D004036 ORTHO05D004576 1.0e-26 124.0 179 43.6
Manes.16G068200 Manihot esculenta HOM05D004036 ORTHO05D004576 3.8e-26 122.1 181 45.3
CAN.G21.9 Capsicum annuum HOM05D004036 ORTHO05D004576 1.5e-25 120.2 184 41.8
Nitab4.5_0006579g0060 Nicotiana tabacum HOM05D004036 ORTHO05D004576 3.2e-25 119.0 186 40.3
Peaxi162Scf00105g01426 Petunia axillaris HOM05D004036 ORTHO05D004576 3.2e-25 119.0 180 40.0
QL12p031289 Quercus lobata HOM05D004036 ORTHO05D004576 3.2e-25 119.0 182 41.2
TAR624G0048 Trochodendron aralioides HOM05D004036 ORTHO05D004576 5.5e-25 118.2 196 41.3
TAR626G0352 Trochodendron aralioides HOM05D004036 ORTHO05D004576 5.5e-25 118.2 200 38.5
Nitab4.5_0000125g0270 Nicotiana tabacum HOM05D004036 ORTHO05D004576 7.2e-25 117.9 186 40.3
Oeu045176.1 Olea europaea HOM05D004036 ORTHO05D004576 1.2e-24 117.1 193 38.9
Manes.03G064800 Manihot esculenta HOM05D004036 ORTHO05D004576 1.6e-24 116.7 188 40.4
Cfa013210 Carpinus fangiana HOM05D004036 ORTHO05D004576 3.6e-24 115.5 184 42.9
TWI63G0992 Tripterygium wilfordii HOM05D004036 ORTHO05D004576 3.6e-24 115.5 175 44.6
CiPaw.08G015700 Carya illinoinensis HOM05D004036 ORTHO05D004576 1.4e-23 113.6 186 42.5
Atru.chr7.2325 Acer truncatum HOM05D004036 ORTHO05D004576 1.8e-23 113.2 181 40.9
Potri.006G246600 Populus trichocarpa HOM05D004036 ORTHO05D004576 1.8e-23 113.2 177 40.1
Thecc.09G144100 Theobroma cacao HOM05D004036 ORTHO05D004576 1.8e-23 113.2 184 44.6
Gohir.D06G047900 Gossypium hirsutum HOM05D004036 ORTHO05D004576 2.3e-23 112.8 184 40.8
Hma1.2p1_0003F.1_g003650 Hydrangea macrophylla HOM05D004036 ORTHO05D004576 3.0e-23 112.5 176 43.2
Duzib187G1985 Durio zibethinus HOM05D004036 ORTHO05D004576 6.8e-23 111.3 188 42.6
COL.COLO4_24066 Corchorus olitorius HOM05D004036 ORTHO05D004576 8.8e-23 110.9 189 42.9
HanXRQChr13g0409481 Helianthus annuus HOM05D004036 ORTHO05D004576 2.0e-22 109.8 172 43.0
Gohir.A06G047900 Gossypium hirsutum HOM05D004036 ORTHO05D004576 4.4e-22 108.6 184 39.1
Dinv35883 Davidia involucrata HOM05D004036 ORTHO05D004576 5.7e-22 108.2 96 63.5
Sopen08g021750 Solanum pennellii HOM05D004036 ORTHO05D004576 1.3e-21 107.1 184 38.6
CANSAT56G2568 Cannabis sativa HOM05D004036 ORTHO05D004576 2.2e-21 106.3 178 41.6
Cc08_g08300 Coffea canephora HOM05D004036 ORTHO05D004576 2.2e-21 106.3 195 40.0
Sabra18G0035300 Salix brachista HOM05D004036 ORTHO05D004576 2.8e-21 105.9 181 44.2
ECA240G1837 Erigeron canadensis HOM05D004036 ORTHO05D004576 3.7e-21 105.5 176 39.8
MSTRG.14001 Avicennia marina HOM05D004036 ORTHO05D004576 4.8e-21 105.1 193 37.8
Gohir.D01G158400 Gossypium hirsutum HOM05D004036 ORTHO05D004576 4.8e-21 105.1 155 43.9
Gohir.D09G023175 Gossypium hirsutum HOM05D004036 ORTHO05D004576 4.8e-21 105.1 171 42.1
Lsat_1_v5_gn_3_108141 Lactuca sativa HOM05D004036 ORTHO05D004576 4.8e-21 105.1 152 46.7
PGSC0003DMG400033628 Solanum tuberosum HOM05D004036 ORTHO05D004576 4.8e-21 105.1 185 37.3
Gohir.A12G126300 Gossypium hirsutum HOM05D004036 ORTHO05D004576 6.3e-21 104.8 171 42.1
Solyc08g067810.3 Solanum lycopersicum HOM05D004036 ORTHO05D004576 6.3e-21 104.8 184 38.0
TWI34G1922 Tripterygium wilfordii HOM05D004036 ORTHO05D004576 6.3e-21 104.8 170 42.4
Hma1.2p1_0175F.1_g077210 Hydrangea macrophylla HOM05D004036 ORTHO05D004576 8.3e-21 104.4 169 41.4
arahy.Tifrunner.gnm1.ann1.7NC9IZ Arachis hypogaea HOM05D004036 ORTHO05D004576 1.1e-20 104.0 174 37.9
Haze_21623 Corylus avellana HOM05D004036 ORTHO05D004576 1.1e-20 104.0 222 36.9
Gorai.008G052900 Gossypium raimondii HOM05D004036 ORTHO05D004576 1.4e-20 103.6 162 43.2
Gorai.009G011700 Gossypium raimondii HOM05D004036 ORTHO05D004576 1.4e-20 103.6 171 41.5
Gohir.A11G185400 Gossypium hirsutum HOM05D004036 ORTHO05D004576 1.8e-20 103.2 171 41.5
Gohir.D05G335100 Gossypium hirsutum HOM05D004036 ORTHO05D004576 1.8e-20 103.2 170 42.4
Gohir.D09G022200 Gossypium hirsutum HOM05D004036 ORTHO05D004576 1.8e-20 103.2 171 41.5
Carub.0006s2340 Capsella rubella HOM05D004036 ORTHO05D004576 2.4e-20 102.8 172 39.0
Gohir.A05G010600 Gossypium hirsutum HOM05D004036 ORTHO05D004576 2.4e-20 102.8 176 41.5
AT5G25540 Arabidopsis thaliana HOM05D004036 ORTHO05D004576 3.1e-20 102.4 167 38.3
Duzib150G0431 Durio zibethinus HOM05D004036 ORTHO05D004576 3.1e-20 102.4 184 39.7
RcHm_v2.0_Chr6g0312751 Rosa chinensis HOM05D004036 ORTHO05D004576 3.1e-20 102.4 182 40.1
FAN20G2367 Fragaria x ananassa HOM05D004036 ORTHO05D004576 4.1e-20 102.1 184 38.6
arahy.Tifrunner.gnm1.ann1.AAJ54F Arachis hypogaea HOM05D004036 ORTHO05D004576 5.4e-20 101.7 174 38.5
MSTRG.1647 Avicennia marina HOM05D004036 ORTHO05D004576 5.4e-20 101.7 193 36.8
DCAR_003061 Daucus carota HOM05D004036 ORTHO05D004576 5.4e-20 101.7 188 38.8
FAN15G1681 Fragaria x ananassa HOM05D004036 ORTHO05D004576 7.0e-20 101.3 183 39.9
Gohir.D12G195700 Gossypium hirsutum HOM05D004036 ORTHO05D004576 9.1e-20 100.9 171 41.5
FvH4_2g30160 Fragaria vesca HOM05D004036 ORTHO05D004576 1.2e-19 100.5 184 37.5
FAN24G0425 Fragaria x ananassa HOM05D004036 ORTHO05D004576 1.2e-19 100.5 184 37.5
SGA_v2.0_scaffold163G38098 Striga asiatica HOM05D004036 ORTHO05D004576 1.2e-19 100.5 183 38.8
Migut.E01501 Erythranthe guttata HOM05D004036 ORTHO05D004576 1.6e-19 100.1 181 39.2
Gorai.004G151900 Gossypium raimondii HOM05D004036 ORTHO05D004576 1.6e-19 100.1 169 41.4
FAN27G0504 Fragaria x ananassa HOM05D004036 ORTHO05D004576 2.7e-19 99.4 184 37.5
PSO063G5334 Papaver somniferum HOM05D004036 ORTHO05D004576 2.7e-19 99.4 186 35.5
GSVIVG01015440001 Vitis vinifera HOM05D004036 ORTHO05D004576 2.7e-19 99.4 85 61.2
Thhalv10004997m.g Eutrema salsugineum HOM05D004036 ORTHO05D004576 3.5e-19 99.0 154 39.0
QL02p086217 Quercus lobata HOM05D004036 ORTHO05D004576 3.5e-19 99.0 97 58.8
C07p42280 Brassica napus HOM05D004036 ORTHO05D004576 4.5e-19 98.6 158 38.0
CiPaw.03G235800 Carya illinoinensis HOM05D004036 ORTHO05D004576 5.9e-19 98.2 187 38.0
Eucgr.C01818 Eucalyptus grandis HOM05D004036 ORTHO05D004576 5.9e-19 98.2 188 35.6
A06p36250 Brassica napus HOM05D004036 ORTHO05D004576 7.7e-19 97.8 156 38.5
BraA06t26547Z Brassica rapa HOM05D004036 ORTHO05D004576 7.7e-19 97.8 156 38.5
Phvul.001G055700 Phaseolus vulgaris HOM05D004036 ORTHO05D004576 7.7e-19 97.8 186 37.6
AL6G37340 Arabidopsis lyrata HOM05D004036 ORTHO05D004576 1.0e-18 97.4 170 38.2
BolC7t44757H Brassica oleracea HOM05D004036 ORTHO05D004576 1.0e-18 97.4 158 38.0
Gohir.A12G241700 Gossypium hirsutum HOM05D004036 ORTHO05D004576 1.7e-18 96.7 171 40.4
Psat6g031000 Pisum sativum HOM05D004036 ORTHO05D004576 1.7e-18 96.7 183 36.6
Glyma.17G203900 Glycine max HOM05D004036 ORTHO05D004576 2.3e-18 96.3 189 37.0
Gohir.D05G011350 Gossypium hirsutum HOM05D004036 ORTHO05D004576 2.3e-18 96.3 136 47.1
VMungo0647G1622 Vigna mungo HOM05D004036 ORTHO05D004576 2.3e-18 96.3 186 37.6
Lalb_Chr08g0243781 Lupinus albus HOM05D004036 ORTHO05D004576 2.9e-18 95.9 161 37.3
Medtr1g011280 Medicago truncatula HOM05D004036 ORTHO05D004576 2.9e-18 95.9 180 37.8
Prupe.1G466700 Prunus persica HOM05D004036 ORTHO05D004576 2.9e-18 95.9 185 38.9
THA.LOC104799217 Tarenaya hassleriana HOM05D004036 ORTHO05D004576 2.9e-18 95.9 170 37.6
MBI01_g10034_MAGBIO Magnolia biondii HOM05D004036 ORTHO05D004576 3.8e-18 95.5 196 35.7
Glyma.14G129200 Glycine max HOM05D004036 ORTHO05D004576 8.6e-18 94.4 188 36.7
SalBow8G4507 Salvia bowleyana HOM05D004036 ORTHO05D004576 8.6e-18 94.4 188 35.1
SalBow8G4816 Salvia bowleyana HOM05D004036 ORTHO05D004576 8.6e-18 94.4 188 35.1
vmacro05446 Vaccinium macrocarpon HOM05D004036 ORTHO05D004576 8.6e-18 94.4 218 33.9
Sp2g22000 Schrenkiella parvula HOM05D004036 ORTHO05D004576 1.9e-17 93.2 157 34.4
TPR.G20095 Trifolium pratense HOM05D004036 ORTHO05D004576 2.5e-17 92.8 180 35.0
Sabra06G0192900 Salix brachista HOM05D004036 ORTHO05D004576 3.3e-17 92.4 111 48.6
BcaC03g13367 Brassica carinata HOM05D004036 ORTHO05D004576 4.2e-17 92.0 142 37.3
BcaC04g19226 Brassica carinata HOM05D004036 ORTHO05D004576 5.5e-17 91.7 153 38.6
C09p65420 Brassica napus HOM05D004036 ORTHO05D004576 5.5e-17 91.7 153 38.6
BolC9t59367H Brassica oleracea HOM05D004036 ORTHO05D004576 5.5e-17 91.7 153 38.6
PSO782G2888 Papaver somniferum HOM05D004036 ORTHO05D004576 5.5e-17 91.7 183 32.8
Cpa.g.sc91.6 Carica papaya HOM05D004036 ORTHO05D004576 7.2e-17 91.3 96 52.1
Aa31LG3G15750 Aethionema arabicum HOM05D004036 ORTHO05D004576 1.6e-16 90.1 163 38.7
PGR031G0366 Punica granatum HOM05D004036 ORTHO05D004576 1.6e-16 90.1 190 34.7
EL10Ac2g02537 Beta vulgaris HOM05D004036 ORTHO05D004576 2.1e-16 89.7 157 40.1
CsaV3_3G046690 Cucumis sativus L. HOM05D004036 ORTHO05D004576 2.1e-16 89.7 188 34.6
Lj5g0012132 Lotus japonicus HOM05D004036 ORTHO05D004576 4.7e-16 88.6 174 34.5
Sc23g0007020 Simmondsia chinensis HOM05D004036 ORTHO05D004576 6.1e-16 88.2 120 47.5
AL6G22100 Arabidopsis lyrata HOM05D004036 ORTHO05D004576 1.0e-15 87.4 137 37.2
BcaNung01927 Brassica carinata HOM05D004036 ORTHO05D004576 1.4e-15 87.0 144 36.1
CARHR201790 Cardamine hirsuta HOM05D004036 ORTHO05D004576 1.8e-15 86.7 161 35.4
Aa31LG11G4630 Aethionema arabicum HOM05D004036 ORTHO05D004576 3.0e-15 85.9 167 33.5
Ah.12g063370 Amaranthus hybridus HOM05D004036 ORTHO05D004576 3.0e-15 85.9 155 39.4
AUR62024838 Chenopodium quinoa HOM05D004036 ORTHO05D004576 3.0e-15 85.9 156 36.5
BolC2t12008H Brassica oleracea HOM05D004036 ORTHO05D004576 5.2e-15 85.1 152 36.8
AUR62032381 Chenopodium quinoa HOM05D004036 ORTHO05D004576 5.2e-15 85.1 152 36.2
Lalb_Chr23g0269031 Lupinus albus HOM05D004036 ORTHO05D004576 8.9e-15 84.3 173 35.8
BcaNung07259 Brassica carinata HOM05D000175 ORTHO05D000481 1.5e-14 83.6 122 41.8
C02p59450 Brassica napus HOM05D004036 ORTHO05D004576 2.0e-14 83.2 144 38.9
AT5G11440 Arabidopsis thaliana HOM05D004036 ORTHO05D004576 2.6e-14 82.8 127 37.0
Actinidia14638 Actinidia chinensis HOM05D004036 ORTHO05D004576 3.4e-14 82.4 90 51.1
A10p26310 Brassica napus HOM05D004036 ORTHO05D004576 3.4e-14 82.4 153 37.9
HanXRQChr03g0077811 Helianthus annuus HOM05D004036 ORTHO05D004576 5.7e-14 81.6 85 56.5
MD08G1136600 Malus domestica HOM05D004036 ORTHO05D004576 5.7e-14 81.6 82 54.9
A02p01010 Brassica napus HOM05D004036 ORTHO05D004576 9.8e-14 80.9 146 34.9
BraA02t05082Z Brassica rapa HOM05D004036 ORTHO05D004576 9.8e-14 80.9 146 34.9
Oeu031563.3 Olea europaea HOM05D004036 ORTHO05D004576 9.8e-14 80.9 123 40.7
Sp6g32160 Schrenkiella parvula HOM05D004036 ORTHO05D004576 9.8e-14 80.9 156 35.3
Sed0023915 Sechium edule HOM05D004036 ORTHO05D004576 9.8e-14 80.9 190 33.2
CARHR187840 Cardamine hirsuta HOM05D004036 ORTHO05D004576 1.7e-13 80.1 143 37.1
A02p39670 Brassica napus HOM05D004036 ORTHO05D004576 2.2e-13 79.7 144 36.8
BraA02t08932Z Brassica rapa HOM05D004036 ORTHO05D004576 2.2e-13 79.7 144 36.8
THA.LOC104815044 Tarenaya hassleriana HOM05D004036 ORTHO05D004576 2.2e-13 79.7 171 35.1
ClCG05G017210 Citrullus lanatus HOM05D004036 ORTHO05D004576 2.8e-13 79.3 189 34.9
DCAR_007682 Daucus carota HOM05D004036 ORTHO05D004576 2.8e-13 79.3 110 42.7
BcaB04g19786 Brassica carinata HOM05D004036 ORTHO05D004576 3.7e-13 79.0 135 38.5
C02p05040 Brassica napus HOM05D004036 ORTHO05D004576 3.7e-13 79.0 154 33.1
BcaB01g06306 Brassica carinata HOM05D004036 ORTHO05D004576 4.9e-13 78.6 153 35.9
BcaB07g29991 Brassica carinata HOM05D004036 ORTHO05D004576 6.3e-13 78.2 133 36.1
Thhalv10014836m.g Eutrema salsugineum HOM05D004036 ORTHO05D004576 6.3e-13 78.2 161 34.2
Hund25658 Selenicereus undatus HOM05D004036 ORTHO05D004576 6.3e-13 78.2 156 37.2
CSS0014753 Camellia sinensis var. sinensis HOM05D004036 ORTHO05D004576 1.4e-12 77.0 179 32.4
Carub.0006s0989 Capsella rubella HOM05D004036 ORTHO05D004576 1.8e-12 76.6 152 36.2
BcaB08g37059 Brassica carinata HOM05D004036 ORTHO05D004576 5.4e-12 75.1 158 34.2
SGA_v2.0_scaffold169G38632 Striga asiatica HOM05D004036 ORTHO05D004576 7.0e-12 74.7 189 34.4
Gorai.010G053700 Gossypium raimondii HOM05D004036 ORTHO05D004576 2.0e-11 73.2 143 34.3
A03p05000 Brassica napus HOM05D004036 ORTHO05D004576 5.9e-11 71.6 141 34.0
Nn2g11835 Nelumbo nucifera HOM05D004036 ORTHO05D004576 7.8e-11 71.2 148 32.4
BraA10t44688Z Brassica rapa HOM05D004036 ORTHO05D004576 1.7e-10 70.1 154 35.1
MBI04_g26645_MAGBIO Magnolia biondii HOM05D004036 ORTHO05D004576 2.9e-10 69.3 196 28.6
Glyma.06G073400 Glycine max HOM05D004036 ORTHO05D004576 3.8e-10 68.9 144 32.6
Gohir.A07G032200 Gossypium hirsutum HOM05D004036 ORTHO05D004576 5.0e-10 68.6 128 37.5
Gohir.A08G237500 Gossypium hirsutum HOM05D004036 ORTHO05D004576 5.0e-10 68.6 128 37.5
C09p06800 Brassica napus HOM05D004036 ORTHO05D004576 6.6e-10 68.2 124 34.7
BolC9t53601H Brassica oleracea HOM05D004036 ORTHO05D004576 6.6e-10 68.2 124 34.7
BcaB01g05484 Brassica carinata HOM05D004036 ORTHO05D004576 1.9e-09 66.6 141 33.3
BolC3t13087H Brassica oleracea HOM05D004036 ORTHO05D004576 1.9e-09 66.6 141 33.3
MELO3C003669.2 Cucumis melo HOM05D004036 ORTHO05D004576 1.9e-09 66.6 139 33.1
C03p05740 Brassica napus HOM05D004036 ORTHO05D004576 3.3e-09 65.9 141 33.3
Nn8g39276 Nelumbo nucifera HOM05D004036 ORTHO05D004576 9.5e-09 64.3 151 33.1
Prupe.7G234300 Prunus persica HOM05D004036 ORTHO05D004576 1.2e-08 63.9 148 33.1
TAR383G0233 Trochodendron aralioides HOM05D004036 ORTHO05D004576 4.7e-08 62.0 81 45.7
BolC7t40715H Brassica oleracea HOM05D004036 ORTHO05D004576 6.1e-08 61.6 100 33.0
BcaC09g50856 Brassica carinata HOM05D004036 ORTHO05D004576 1.0e-07 60.8 100 33.0
C01p19860 Brassica napus HOM05D004036 ORTHO05D004576 1.8e-07 60.1 105 32.4
BolC1t01914H Brassica oleracea HOM05D004036 ORTHO05D004576 1.8e-07 60.1 105 32.4
C07p03200 Brassica napus HOM05D004036 ORTHO05D004576 4.0e-07 58.9 103 34.0
Lalb_Chr24g0393701 Lupinus albus HOM05D000001 ORTHO05D004044 1.2e-06 57.4 108 36.1
Gohir.D04G088301 Gossypium hirsutum HOM05D004036 ORTHO05D004576 1.5e-06 57.0 51 52.9
Gohir.D12G143101 Gossypium hirsutum HOM05D004036 ORTHO05D004576 1.5e-06 57.0 51 52.9
Oeu019418.1 Olea europaea HOM05D004036 ORTHO05D004576 2.0e-06 56.6 255 24.3
FvH4_2g30791 Fragaria vesca HOM05D000001 ORTHO05D004044 4.4e-06 55.5 93 35.5
FAN20G1082 Fragaria x ananassa HOM05D000001 ORTHO05D004044 4.4e-06 55.5 93 35.5
FAN24G2651 Fragaria x ananassa HOM05D000001 ORTHO05D004044 4.4e-06 55.5 93 35.5
Gohir.A13G188300 Gossypium hirsutum HOM05D000001 ORTHO05D004044 4.4e-06 55.5 120 30.0
Lsat_1_v5_gn_8_149721 Lactuca sativa HOM05D000001 ORTHO05D004044 4.4e-06 55.5 51 47.1
ATR0037G046 Amborella trichopoda HOM05D004036 ORTHO05D004576 5.8e-06 55.1 201 26.9
DCAR_003727 Daucus carota HOM05D000001 ORTHO05D004044 5.8e-06 55.1 101 37.6
Gohir.D13G195200 Gossypium hirsutum HOM05D000001 ORTHO05D004044 5.8e-06 55.1 113 29.2
Gorai.013G221300 Gossypium raimondii HOM05D000001 ORTHO05D004044 5.8e-06 55.1 113 29.2
Lj5g0004443 Lotus japonicus HOM05D000001 ORTHO05D004044 5.8e-06 55.1 103 34.0
Phvul.009G097900 Phaseolus vulgaris HOM05D004036 ORTHO05D050263 5.8e-06 55.1 76 38.2
Lalb_Chr22g0349641 Lupinus albus HOM05D000001 ORTHO05D004044 7.5e-06 54.7 57 43.9


User provided reference genes

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