Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 1.2e-148 530.0 304 100.0
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 7.8e-100 367.9 303 69.3
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 4.7e-97 358.6 307 63.5
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 8.0e-97 357.8 307 63.5
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 1.4e-96 357.1 304 62.8
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 1.8e-96 356.7 310 62.9
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.2e-95 354.0 302 64.9
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 2.6e-95 352.8 302 62.3
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 3.4e-95 352.4 302 65.2
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 2.2e-94 349.7 307 62.5
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 6.4e-94 348.2 302 69.2
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 1.1e-93 347.4 304 69.1
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.9e-93 346.7 308 61.4
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 9.2e-93 344.4 308 60.7
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 9.2e-93 344.4 308 60.7
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 9.2e-93 344.4 305 63.0
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 4.6e-92 342.0 308 60.4
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 4.6e-92 342.0 304 62.2
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 6.0e-92 341.7 304 62.8
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 1.0e-91 340.9 304 62.5
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 2.3e-91 339.7 340 57.1
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 3.9e-91 339.0 304 60.5
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 3.9e-91 339.0 304 60.9
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 8.6e-91 337.8 305 60.7
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 8.6e-91 337.8 303 61.1
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 1.1e-90 337.4 305 71.5
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 1.5e-90 337.0 309 63.8
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 1.9e-90 336.7 304 64.5
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 3.3e-90 335.9 254 69.3
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 5.6e-90 335.1 302 58.9
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 7.3e-90 334.7 317 59.3
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 1.2e-89 334.0 303 58.4
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 3.6e-89 332.4 305 59.3
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 2.3e-88 329.7 303 59.1
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 2.3e-88 329.7 303 59.1
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 6.8e-88 328.2 305 59.7
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 4.4e-87 325.5 303 57.1
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 5.8e-87 325.1 304 59.2
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 7.5e-87 324.7 304 60.2
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 1.3e-86 323.9 304 58.6
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 1.3e-86 323.9 315 57.5
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 2.2e-86 323.2 305 61.0
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 6.4e-86 321.6 304 60.9
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 8.3e-86 321.2 304 61.8
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 1.1e-85 320.9 317 57.7
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 2.4e-85 319.7 304 61.2
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 2.4e-85 319.7 305 67.5
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 2.4e-85 319.7 302 60.9
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 2.4e-85 319.7 304 58.2
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 3.2e-85 319.3 301 57.1
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 5.4e-85 318.5 309 57.9
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 7.1e-85 318.2 304 56.2
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 7.1e-85 318.2 304 59.2
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 9.2e-85 317.8 305 58.7
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.1e-84 316.6 300 58.7
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 3.5e-84 315.8 304 62.2
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 1.1e-82 310.8 305 62.6
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 1.1e-82 310.8 303 56.1
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 1.9e-82 310.1 315 55.6
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 1.9e-82 310.1 312 58.0
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 5.6e-82 308.5 303 55.8
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 9.5e-82 307.8 317 55.8
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 3.6e-81 305.8 316 55.4
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 3.6e-81 305.8 304 57.2
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 3.6e-81 305.8 307 55.0
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 4.7e-81 305.4 316 54.7
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 1.1e-80 304.3 316 54.1
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 1.1e-80 304.3 316 54.1
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 1.1e-80 304.3 304 55.9
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 1.4e-80 303.9 316 54.1
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 1.4e-80 303.9 316 54.1
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 5.2e-80 302.0 316 53.5
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 5.2e-80 302.0 309 57.0
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 8.9e-80 301.2 305 64.9
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 5.8e-79 298.5 315 54.0
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 7.6e-79 298.1 316 53.8
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 9.9e-79 297.7 317 54.3
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 2.2e-78 296.6 316 54.1
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 2.2e-78 296.6 306 55.2
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 3.7e-78 295.8 303 64.4
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 1.9e-77 293.5 304 55.9
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 4.1e-77 292.4 312 52.9
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 1.2e-76 290.8 308 54.2
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 1.3e-75 287.3 307 53.4
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 3.0e-75 286.2 315 52.4
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 2.5e-74 283.1 302 53.0
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 4.0e-72 275.8 293 53.9
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 2.0e-71 273.5 305 62.0
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 2.6e-71 273.1 310 55.5
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 4.4e-71 272.3 305 52.5
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 4.9e-70 268.9 265 55.1
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 8.4e-70 268.1 201 70.1
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 1.4e-69 267.3 307 58.3
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 1.2e-68 264.2 301 55.5
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 1.3e-65 254.2 258 54.3
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 4.8e-65 252.3 260 53.5
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 1.4e-64 250.8 266 51.9
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 9.0e-64 248.1 280 51.4
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 1.2e-63 247.7 201 64.7
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 4.2e-61 239.2 318 48.4
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 1.7e-59 233.8 306 57.5
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 2.5e-58 229.9 248 62.5
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 1.0e-51 208.0 278 46.4
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 2.5e-50 203.4 308 53.9
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 9.0e-48 194.9 305 41.0
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 1.3e-46 191.0 226 48.7
MBI07_g45742_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 4.2e-45 186.0 304 42.4
Sopen03g003300 Solanum pennellii HOM05D000974 ORTHO05D007456 2.1e-44 183.7 188 60.1
AagrBONN_evm.TU.Sc2ySwM_117.3541 Anthoceros agrestis HOM05D000974 ORTHO05D007456 3.5e-44 183.0 268 41.8
PGSC0003DMG400009074 Solanum tuberosum HOM05D000974 ORTHO05D007456 6.0e-44 182.2 208 54.8
CiPaw.05G257400 Carya illinoinensis HOM05D000974 ORTHO05D007456 2.0e-39 167.2 135 65.2
Mapoly0123s0011 Marchantia polymorpha HOM05D000974 ORTHO05D007456 2.6e-39 166.8 269 38.3
SMO347G0394 Selaginella moellendorffii HOM05D000974 ORTHO05D007456 6.7e-35 152.1 309 35.9
Pp3c2_19140 Physcomitrium patens HOM05D000974 ORTHO05D007456 8.7e-35 151.8 273 37.7
Lalb_Chr08g0240561 Lupinus albus HOM05D000974 ORTHO05D007456 1.1e-32 144.8 127 59.8
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.2e-30 137.1 178 47.2
Oeu060977.1 Olea europaea HOM05D000974 ORTHO05D007456 2.9e-30 136.7 120 61.7
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.9e-30 136.7 178 47.8
ATR0589G055 Amborella trichopoda HOM05D000974 ORTHO05D007456 5.5e-29 132.5 120 56.7
Hma1.2p1_1655F.1_g295980 Hydrangea macrophylla HOM05D000974 ORTHO05D007456 1.0e-27 128.3 187 40.1
Actinidia08630 Actinidia chinensis HOM05D000974 ORTHO05D007456 9.7e-26 121.7 113 61.1
Lalb_Chr08g0240551 Lupinus albus HOM05D000974 ORTHO05D007456 4.8e-25 119.4 121 52.1
CiPaw.05G257300 Carya illinoinensis HOM05D000974 ORTHO05D007456 2.6e-23 113.6 139 52.5
Pp3c3_31670 Physcomitrium patens HOM05D000974 ORTHO05D007456 3.2e-21 106.7 158 43.0
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 5.5e-21 105.9 308 32.5
TAR629G1462 Trochodendron aralioides HOM05D000974 ORTHO05D007456 1.4e-19 101.3 79 62.0
CDE10G0750 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 5.9e-15 85.9 129 53.5
vmacro10109 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 1.3e-14 84.7 154 37.0
Lalb_Chr08g0240541 Lupinus albus HOM05D000974 ORTHO05D007456 1.9e-13 80.9 79 58.2
ATR0589G008 Amborella trichopoda HOM05D000974 ORTHO05D007456 2.3e-11 73.9 78 59.0
Atru.chr1.262 Acer truncatum HOM05D000974 ORTHO05D007456 2.8e-09 67.0 79 53.2
DCAR_022594 Daucus carota HOM05D000974 ORTHO05D007456 4.1e-08 63.2 72 56.9


User provided reference genes

Program Settings