Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 3.2e-195 684.9 336 100.0
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.4e-150 536.6 335 79.1
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 4.5e-149 531.6 336 75.9
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 4.2e-147 525.0 335 77.6
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 5.5e-147 524.6 336 76.5
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 1.0e-145 520.4 337 75.1
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.5e-144 516.5 337 73.6
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 2.5e-144 515.8 337 75.1
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 2.2e-143 512.7 317 78.5
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 1.8e-142 509.6 332 74.4
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 4.1e-142 508.4 322 75.8
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 9.1e-142 507.3 333 74.2
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 2.0e-141 506.1 337 72.4
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 4.5e-141 505.0 320 76.2
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.3e-140 503.4 337 72.1
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 1.7e-140 503.1 325 74.2
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 2.9e-140 502.3 337 71.8
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 2.9e-140 502.3 335 72.5
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 5.5e-139 498.0 335 71.6
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.2e-138 496.9 326 74.5
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 1.2e-138 496.9 334 72.8
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 6.1e-138 494.6 337 72.1
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 1.0e-137 493.8 334 72.2
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 1.0e-137 493.8 334 72.5
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 3.9e-137 491.9 331 73.1
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 5.1e-137 491.5 324 72.8
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 1.5e-136 490.0 333 71.8
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 5.7e-136 488.0 294 79.6
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 7.4e-136 487.6 317 73.5
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 1.3e-135 486.9 329 72.3
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.7e-135 486.5 331 71.0
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 1.4e-134 483.4 320 71.2
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 4.1e-134 481.9 319 70.8
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 1.2e-133 480.3 325 70.5
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 2.6e-133 479.2 318 72.0
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 2.6e-133 479.2 333 68.5
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 2.6e-133 479.2 325 71.1
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 5.9e-133 478.0 321 70.7
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 1.0e-132 477.2 337 70.0
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 1.0e-132 477.2 326 70.6
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 1.3e-132 476.9 333 68.8
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 5.0e-132 474.9 336 69.6
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 6.5e-132 474.6 334 67.7
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 1.1e-131 473.8 331 70.4
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 1.4e-131 473.4 321 69.8
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 1.9e-131 473.0 330 68.2
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 4.2e-131 471.9 330 67.9
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 7.2e-131 471.1 334 67.4
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 2.1e-130 469.5 335 67.5
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 3.6e-130 468.8 319 70.2
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.0e-129 467.2 330 68.2
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 1.4e-129 466.8 331 68.0
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 1.8e-129 466.5 319 69.0
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 3.9e-129 465.3 330 67.6
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 5.2e-129 464.9 334 67.4
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 6.7e-129 464.5 313 69.6
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 1.1e-128 463.8 319 68.7
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 2.0e-128 463.0 330 67.3
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 2.6e-128 462.6 335 67.8
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 3.3e-128 462.2 338 68.6
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 7.4e-128 461.1 335 67.2
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 9.7e-128 460.7 313 70.6
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 1.7e-127 459.9 318 69.5
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 8.2e-127 457.6 334 66.5
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 1.1e-126 457.2 328 67.7
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 5.3e-126 454.9 330 67.0
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 1.5e-123 446.8 310 68.1
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 3.2e-123 445.7 337 64.7
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 5.5e-123 444.9 318 68.2
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 5.5e-123 444.9 336 66.4
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 1.2e-122 443.7 331 68.3
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 2.1e-122 443.0 319 67.7
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 2.7e-122 442.6 316 67.1
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 2.7e-122 442.6 316 67.1
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 2.7e-122 442.6 316 67.1
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 2.7e-122 442.6 321 67.0
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 3.6e-122 442.2 316 67.1
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 3.6e-122 442.2 316 67.1
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 4.7e-122 441.8 325 65.8
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 4.7e-122 441.8 320 66.6
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 1.0e-121 440.7 333 66.1
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 4.0e-121 438.7 316 66.5
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 5.2e-121 438.3 316 66.1
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 4.4e-120 435.3 309 68.6
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 5.7e-120 434.9 335 63.6
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 8.3e-119 431.0 320 64.7
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 3.5e-117 425.6 320 63.4
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 1.3e-108 397.1 336 61.3
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 5.0e-108 395.2 308 61.7
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 6.8e-105 384.8 313 58.1
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 3.7e-103 379.0 293 64.2
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 6.3e-103 378.3 323 60.1
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 2.5e-99 366.3 318 59.1
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 9.5e-99 364.4 209 82.8
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.9e-86 323.6 236 69.1
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 2.3e-84 316.6 215 72.6
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 2.3e-84 316.6 336 50.6
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 4.3e-83 312.4 318 50.3
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 3.1e-81 306.2 305 52.5
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 7.1e-78 295.0 203 69.0
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.2e-69 267.7 163 77.9
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 3.9e-68 262.7 164 73.2
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 2.8e-66 256.5 185 65.4
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 2.8e-66 256.5 177 66.1
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 7.3e-59 231.9 134 78.4
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.5e-56 224.2 155 70.3
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 2.4e-54 216.9 256 50.4
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.5e-51 207.6 284 43.7
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.9e-46 190.7 131 70.2
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 8.7e-44 181.8 126 73.8
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 5.3e-41 172.6 92 82.6
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.3e-36 157.1 144 58.3
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.2e-26 124.0 126 53.2
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 3.0e-20 103.6 106 48.1
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 6.3e-18 95.9 308 30.2
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.4e-17 94.0 72 63.9
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 3.9e-12 76.6 70 54.3
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 6.7e-12 75.9 120 40.0
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 9.1e-09 65.5 132 34.1
Cre16.g655900 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 1.1e-06 58.5 253 26.1


User provided reference genes

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