Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01022 Aquilegia oxysepala HOM05D002579 ORTHO05D002775 1.4e-53 212.6 105 100.0
TAR381G0482 Trochodendron aralioides HOM05D002579 ORTHO05D002775 1.1e-08 63.5 57 59.6
HPP92_004414 Vanilla planifolia HOM05D002579 ORTHO05D002775 5.4e-08 61.2 51 56.9
Prupe.8G032800 Prunus persica HOM05D002579 ORTHO05D002775 7.0e-08 60.8 52 51.9
HPP92_004413 Vanilla planifolia HOM05D002579 ORTHO05D002775 7.0e-08 60.8 51 54.9
Gohir.A05G270500 Gossypium hirsutum HOM05D002579 ORTHO05D002775 9.2e-08 60.5 61 49.2
MD10G1028300 Malus domestica HOM05D002579 ORTHO05D002775 1.2e-07 60.1 62 53.2
Gohir.D05G272550 Gossypium hirsutum HOM05D002579 ORTHO05D002775 1.6e-07 59.7 42 61.9
Gorai.009G285600 Gossypium raimondii HOM05D002579 ORTHO05D002775 1.6e-07 59.7 42 61.9
Potri.002G067000 Populus trichocarpa HOM05D002579 ORTHO05D002775 1.6e-07 59.7 62 51.6
Cc10_g14470 Coffea canephora HOM05D002579 ORTHO05D002775 3.5e-07 58.5 54 48.1
Medtr6g043700 Medicago truncatula HOM05D002579 ORTHO05D002775 3.5e-07 58.5 38 65.8
Eucgr.F04231 Eucalyptus grandis HOM05D002579 ORTHO05D002775 4.5e-07 58.2 41 63.4
QL11p027658 Quercus lobata HOM05D002579 ORTHO05D002775 4.5e-07 58.2 67 47.8
MD10G1027900 Malus domestica HOM05D002579 ORTHO05D002775 5.9e-07 57.8 60 51.7
Lj4C697T11 Lonicera japonica HOM05D002579 ORTHO05D002775 7.7e-07 57.4 42 57.1
Lj2g0021875 Lotus japonicus HOM05D002579 ORTHO05D002775 7.7e-07 57.4 55 50.9
Potri.005G193200 Populus trichocarpa HOM05D002579 ORTHO05D002775 7.7e-07 57.4 56 55.4
CiPaw.15G015300 Carya illinoinensis HOM05D002579 ORTHO05D002775 1.0e-06 57.0 59 50.8
CSS0044839 Camellia sinensis var. sinensis HOM05D002579 ORTHO05D002775 1.3e-06 56.6 42 57.1
Cfa018316 Carpinus fangiana HOM05D002579 ORTHO05D002775 1.3e-06 56.6 41 58.5
Cfa018317 Carpinus fangiana HOM05D002579 ORTHO05D002775 1.3e-06 56.6 41 58.5
Ca_11501_v3 Cicer arietinum L. HOM05D002579 ORTHO05D002775 1.3e-06 56.6 52 51.9
Solyc11g005480.2 Solanum lycopersicum HOM05D002579 ORTHO05D002775 2.3e-06 55.8 52 42.3
Actinidia29534 Actinidia chinensis HOM05D002579 ORTHO05D002775 2.9e-06 55.5 52 57.7
FAN24G2874 Fragaria x ananassa HOM05D002579 ORTHO05D002775 2.9e-06 55.5 54 55.6
Dinv41074 Davidia involucrata HOM05D002579 ORTHO05D002775 3.8e-06 55.1 63 52.4
PGR044G0513 Punica granatum HOM05D002579 ORTHO05D002775 3.8e-06 55.1 48 52.1
PGR100G0001 Punica granatum HOM05D002579 ORTHO05D002775 3.8e-06 55.1 48 52.1
TPR.G24439 Trifolium pratense HOM05D002579 ORTHO05D002775 3.8e-06 55.1 42 57.1
Gohir.D05G272651 Gossypium hirsutum HOM05D002579 ORTHO05D002775 5.0e-06 54.7 41 58.5
Gorai.009G285700 Gossypium raimondii HOM05D002579 ORTHO05D002775 5.0e-06 54.7 41 58.5
MD10G1031000 Malus domestica HOM05D002579 ORTHO05D002775 5.0e-06 54.7 58 50.0
RcHm_v2.0_Chr6g0275151 Rosa chinensis HOM05D002579 ORTHO05D002775 5.0e-06 54.7 53 52.8
Actinidia17786 Actinidia chinensis HOM05D002579 ORTHO05D002775 6.6e-06 54.3 48 50.0
Oeu023260.1 Olea europaea HOM05D002579 ORTHO05D002775 6.6e-06 54.3 68 47.1


User provided reference genes

Program Settings