Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G04246 Aquilegia oxysepala HOM05D002306 ORTHO05D006484 3.0e-54 214.9 110 100.0
Aqoxy3G03743 Aquilegia oxysepala HOM05D002306 ORTHO05D006484 2.9e-36 155.2 110 75.5
PSO135G0367 Papaver somniferum HOM05D002306 ORTHO05D006484 1.9e-35 152.5 108 71.3
Haze_00198 Corylus avellana HOM05D002306 ORTHO05D005773 1.6e-34 149.4 103 75.7
ECA233G2756 Erigeron canadensis HOM05D002476 ORTHO05D006484 1.6e-34 149.4 102 72.5
PSO384G3554 Papaver somniferum HOM05D002306 ORTHO05D006484 1.6e-34 149.4 110 68.2
Prupe.2G312900 Prunus persica HOM05D002306 ORTHO05D006484 3.5e-34 148.3 103 75.7
CSS0043540 Camellia sinensis var. sinensis HOM05D002306 ORTHO05D006484 6.0e-34 147.5 102 74.5
arahy.Tifrunner.gnm1.ann1.K9F3KZ Arachis hypogaea HOM05D002306 ORTHO05D006484 1.7e-33 146.0 93 75.3
Nn8g40946 Nelumbo nucifera HOM05D002306 ORTHO05D006484 1.7e-33 146.0 101 71.3
FAN10G3342 Fragaria x ananassa HOM05D002306 ORTHO05D006484 2.3e-33 145.6 103 74.8
Nn3g18952 Nelumbo nucifera HOM05D002306 ORTHO05D006484 3.0e-33 145.2 90 80.0
QL09p008635 Quercus lobata HOM05D002306 ORTHO05D006484 3.9e-33 144.8 102 73.5
vmacro10128 Vaccinium macrocarpon HOM05D002306 ORTHO05D006484 3.9e-33 144.8 110 70.9
COL.COLO4_16787 Corchorus olitorius HOM05D002306 ORTHO05D006484 6.6e-33 144.1 92 77.2
RcHm_v2.0_Chr1g0381471 Rosa chinensis HOM05D002306 ORTHO05D006484 6.6e-33 144.1 87 82.8
arahy.Tifrunner.gnm1.ann1.84THGE Arachis hypogaea HOM05D002306 ORTHO05D006484 1.1e-32 143.3 90 76.7
Dinv29265 Davidia involucrata HOM05D002306 ORTHO05D006484 1.1e-32 143.3 110 71.8
Actinidia08660 Actinidia chinensis HOM05D002306 ORTHO05D006484 1.5e-32 142.9 110 70.9
CANSAT21G2118 Cannabis sativa HOM05D002306 ORTHO05D006484 1.5e-32 142.9 86 81.4
PSO782G0677 Papaver somniferum HOM05D002306 ORTHO05D006484 1.5e-32 142.9 110 69.1
Duzib084G1054 Durio zibethinus HOM05D002306 ORTHO05D006484 1.9e-32 142.5 101 72.3
Phvul.001G057400 Phaseolus vulgaris HOM05D002306 ORTHO05D006484 1.9e-32 142.5 94 75.5
Cfa016242 Carpinus fangiana HOM05D002306 ORTHO05D006484 2.5e-32 142.1 87 80.5
FAN10G1840 Fragaria x ananassa HOM05D002306 ORTHO05D006484 4.3e-32 141.4 103 73.8
MBI07_g24774_MAGBIO Magnolia biondii HOM05D002306 ORTHO05D006484 4.3e-32 141.4 108 69.4
Medtr1g007870 Medicago truncatula HOM05D002306 ORTHO05D006484 7.3e-32 140.6 90 77.8
MD07G1293100 Malus domestica HOM05D002306 ORTHO05D006484 9.5e-32 140.2 101 71.3
Manes.05G190300 Manihot esculenta HOM05D002306 ORTHO05D006484 9.5e-32 140.2 99 72.7
Potri.015G011500 Populus trichocarpa HOM05D002306 ORTHO05D006484 1.6e-31 139.4 84 78.6
Atru.chr1.2784 Acer truncatum HOM05D002306 ORTHO05D006484 2.1e-31 139.0 86 77.9
ECA232G1226 Erigeron canadensis HOM05D002306 ORTHO05D006484 2.1e-31 139.0 85 78.8
Gohir.A09G184900 Gossypium hirsutum HOM05D002306 ORTHO05D006484 2.8e-31 138.7 92 75.0
Psat5g075320 Pisum sativum HOM05D002306 ORTHO05D006484 2.8e-31 138.7 95 73.7
Thecc.03G200700 Theobroma cacao HOM05D002306 ORTHO05D006484 3.6e-31 138.3 92 76.1
PSO170G5717 Papaver somniferum HOM05D002306 ORTHO05D006484 4.7e-31 137.9 89 75.3
TPR.G33626 Trifolium pratense HOM05D002306 ORTHO05D006484 4.7e-31 137.9 90 74.4
Medtr3g091850 Medicago truncatula HOM05D002306 ORTHO05D006484 8.1e-31 137.1 94 74.5
vmacro06392 Vaccinium macrocarpon HOM05D002306 ORTHO05D006484 8.1e-31 137.1 102 69.6
arahy.Tifrunner.gnm1.ann1.CGD4UQ Arachis hypogaea HOM05D002306 ORTHO05D006484 1.1e-30 136.7 90 73.3
CAN.G481.25 Capsicum annuum HOM05D002306 ORTHO05D006484 1.1e-30 136.7 95 74.7
MD01G1222500 Malus domestica HOM05D002306 ORTHO05D006484 1.4e-30 136.3 103 69.9
Solyc03g083020.3 Solanum lycopersicum HOM05D002306 ORTHO05D006484 1.4e-30 136.3 84 79.8
Sopen03g022830 Solanum pennellii HOM05D002306 ORTHO05D006484 1.4e-30 136.3 84 79.8
TWI39G0647 Tripterygium wilfordii HOM05D002306 ORTHO05D006484 1.4e-30 136.3 100 72.0
Gohir.D09G179800 Gossypium hirsutum HOM05D002306 ORTHO05D006484 1.8e-30 136.0 101 71.3
Lsat_1_v5_gn_8_5361 Lactuca sativa HOM05D002306 ORTHO05D006484 1.8e-30 136.0 92 77.2
Gorai.006G201800 Gossypium raimondii HOM05D002306 ORTHO05D006484 2.3e-30 135.6 101 71.3
Lalb_Chr11g0066981 Lupinus albus HOM05D002306 ORTHO05D006484 3.1e-30 135.2 90 71.1
MSTRG.8645 Avicennia marina HOM05D002306 ORTHO05D006484 5.2e-30 134.4 84 77.4
Glyma.11G174073 Glycine max HOM05D002306 ORTHO05D006484 5.2e-30 134.4 87 75.9
Glyma.17G200500 Glycine max HOM05D002306 ORTHO05D006484 5.2e-30 134.4 87 75.9
Sed0012841 Sechium edule HOM05D002306 ORTHO05D006484 5.2e-30 134.4 106 64.2
PGSC0003DMG402018530 Solanum tuberosum HOM05D002306 ORTHO05D006484 5.2e-30 134.4 84 78.6
Migut.F00201 Erythranthe guttata HOM05D002306 ORTHO05D006484 8.9e-30 133.7 101 70.3
Lj6g0020019 Lotus japonicus HOM05D002306 ORTHO05D006484 8.9e-30 133.7 87 75.9
Oeu037053.1 Olea europaea HOM05D002306 ORTHO05D006484 8.9e-30 133.7 81 80.2
Hund11652 Selenicereus undatus HOM05D002306 ORTHO05D006484 1.2e-29 133.3 91 72.5
TPR.G12084 Trifolium pratense HOM05D002306 ORTHO05D006484 3.4e-29 131.7 90 73.3
GSVIVG01038565001 Vitis vinifera HOM05D002306 ORTHO05D006484 3.4e-29 131.7 85 76.5
Ciclev10023672m.g Citrus clementina HOM05D002306 ORTHO05D006484 4.4e-29 131.3 99 67.7
Sabra12G0015400 Salix brachista HOM05D002306 ORTHO05D006484 4.4e-29 131.3 84 75.0
SGA_v2.0_scaffold44G16812 Striga asiatica HOM05D002306 ORTHO05D005773 7.5e-29 130.6 110 61.8
CDE11G0760 Ceratophyllum demersum HOM05D002306 ORTHO05D006484 9.9e-29 130.2 80 80.0
MELO3C008504.2 Cucumis melo HOM05D002306 ORTHO05D006484 9.9e-29 130.2 92 69.6
Eucgr.K00393 Eucalyptus grandis HOM05D002306 ORTHO05D006484 9.9e-29 130.2 86 75.6
FvH4_7g31970 Fragaria vesca HOM05D002306 ORTHO05D006484 9.9e-29 130.2 85 80.0
FAN06G3491 Fragaria x ananassa HOM05D002306 ORTHO05D006484 1.3e-28 129.8 83 81.9
Peaxi162Scf00740g00131 Petunia axillaris HOM05D002306 ORTHO05D006484 1.3e-28 129.8 92 71.7
CiPaw.05G197900 Carya illinoinensis HOM05D002306 ORTHO05D006484 1.7e-28 129.4 81 80.2
DCAR_008946 Daucus carota HOM05D002306 ORTHO05D006484 2.2e-28 129.0 81 76.5
PGR042G2650 Punica granatum HOM05D002306 ORTHO05D006484 2.2e-28 129.0 87 72.4
Rhsim03G0209800 Rhododendron simsii HOM05D002306 ORTHO05D006484 2.2e-28 129.0 83 79.5
Rhsim03G0210000 Rhododendron simsii HOM05D002306 ORTHO05D006484 2.2e-28 129.0 83 79.5
Rhsim03G0210100 Rhododendron simsii HOM05D002306 ORTHO05D006484 2.2e-28 129.0 99 69.7
Sc13g0009850 Simmondsia chinensis HOM05D002306 ORTHO05D006484 2.2e-28 129.0 85 72.9
Ah.07g205530 Amaranthus hybridus HOM05D002306 ORTHO05D006484 6.4e-28 127.5 80 77.5
AUR62006081 Chenopodium quinoa HOM05D002306 ORTHO05D006484 6.4e-28 127.5 82 75.6
Sabra15G0009400 Salix brachista HOM05D002306 ORTHO05D006484 8.3e-28 127.1 78 80.8
Cc02_g01390 Coffea canephora HOM05D002306 ORTHO05D006484 1.1e-27 126.7 98 64.3
Aa31LG3G9430 Aethionema arabicum HOM05D002306 ORTHO05D006484 1.4e-27 126.3 96 67.7
THA.LOC104825151 Tarenaya hassleriana HOM05D002306 ORTHO05D006484 1.4e-27 126.3 87 70.1
ClCG05G009020 Citrullus lanatus HOM05D002306 ORTHO05D006484 1.9e-27 125.9 92 67.4
arahy.Tifrunner.gnm1.ann1.XWYM96 Arachis hypogaea HOM05D002476 ORTHO05D002652 2.4e-27 125.6 93 68.8
BcaB08g35664 Brassica carinata HOM05D002306 ORTHO05D006484 3.2e-27 125.2 97 66.0
CsaV3_3G019760 Cucumis sativus L. HOM05D002306 ORTHO05D006484 3.2e-27 125.2 86 72.1
unitig_8.g4777 Utricularia gibba HOM05D002306 ORTHO05D006484 4.1e-27 124.8 84 76.2
A10p10530 Brassica napus HOM05D002306 ORTHO05D006484 5.4e-27 124.4 97 64.9
BraA10t43137Z Brassica rapa HOM05D002306 ORTHO05D006484 5.4e-27 124.4 97 64.9
Thhalv10022935m.g Eutrema salsugineum HOM05D002306 ORTHO05D006484 5.4e-27 124.4 86 68.6
TWI14G0402 Tripterygium wilfordii HOM05D002306 ORTHO05D006484 7.1e-27 124.0 104 66.3
Nitab4.5_0000548g0070 Nicotiana tabacum HOM05D002306 ORTHO05D006484 9.2e-27 123.6 78 80.8
Os02g0305800 Oryza sativa ssp. japonica HOM05D002306 ORTHO05D006484 9.2e-27 123.6 87 67.8
BcaC04g20513 Brassica carinata HOM05D002306 ORTHO05D006484 1.2e-26 123.2 97 63.9
C09p42750 Brassica napus HOM05D002306 ORTHO05D006484 1.2e-26 123.2 97 63.9
BolC9t57151H Brassica oleracea HOM05D002306 ORTHO05D006484 1.2e-26 123.2 97 63.9
HanXRQChr15g0485701 Helianthus annuus HOM05D002306 ORTHO05D006484 1.2e-26 123.2 81 76.5
Sp6g15200 Schrenkiella parvula HOM05D002306 ORTHO05D006484 1.2e-26 123.2 97 63.9
VMungo0647G0954 Vigna mungo HOM05D002306 ORTHO05D006484 2.7e-26 122.1 81 75.3
ATR1127G174 Amborella trichopoda HOM05D002306 ORTHO05D006484 3.5e-26 121.7 88 71.6
ATR0602G202 Amborella trichopoda HOM05D002306 ORTHO05D006484 6.0e-26 120.9 90 70.0
CSS0043767 Camellia sinensis var. sinensis HOM05D002306 ORTHO05D006484 1.0e-25 120.2 81 75.3
Ciclev10024526m.g Citrus clementina HOM05D002306 ORTHO05D006484 1.3e-25 119.8 89 69.7
A03p15460 Brassica napus HOM05D002306 ORTHO05D006484 1.7e-25 119.4 86 64.0
BraA03t10836Z Brassica rapa HOM05D002306 ORTHO05D006484 1.7e-25 119.4 86 64.0
BraA03t10838Z Brassica rapa HOM05D002306 ORTHO05D006484 1.7e-25 119.4 86 64.0
BraA03t10841Z Brassica rapa HOM05D002306 ORTHO05D006484 1.7e-25 119.4 86 64.0
CARHR266060 Cardamine hirsuta HOM05D002306 ORTHO05D006484 1.7e-25 119.4 97 62.9
Thhalv10015123m.g Eutrema salsugineum HOM05D002306 ORTHO05D006484 1.7e-25 119.4 97 62.9
EL10Ac3g05270 Beta vulgaris HOM05D002306 ORTHO05D006484 2.3e-25 119.0 81 77.8
AL8G27670 Arabidopsis lyrata HOM05D002306 ORTHO05D006484 3.0e-25 118.6 97 60.8
AT5G53045 Arabidopsis thaliana HOM05D002306 ORTHO05D006484 3.0e-25 118.6 97 61.9
A03p15430 Brassica napus HOM05D002306 ORTHO05D006484 3.0e-25 118.6 86 64.0
Carub.0008s1324 Capsella rubella HOM05D002306 ORTHO05D006484 3.0e-25 118.6 84 66.7
Ciclev10023496m.g Citrus clementina HOM05D002306 ORTHO05D006484 3.9e-25 118.2 88 69.3
Potri.012G017000 Populus trichocarpa HOM05D002306 ORTHO05D006484 3.9e-25 118.2 73 80.8
Duzib068G0867 Durio zibethinus HOM05D002306 ORTHO05D006484 5.1e-25 117.9 98 66.3
Lsat_1_v5_gn_9_49781 Lactuca sativa HOM05D002306 ORTHO05D006484 6.6e-25 117.5 81 74.1
Lj1g0020624 Lotus japonicus HOM05D002306 ORTHO05D006484 8.6e-25 117.1 80 75.0
BraA03t10832Z Brassica rapa HOM05D002306 ORTHO05D006484 1.1e-24 116.7 83 65.1
BraA03t10833Z Brassica rapa HOM05D002306 ORTHO05D006484 1.1e-24 116.7 83 65.1
Psat6g034920 Pisum sativum HOM05D002306 ORTHO05D006484 5.6e-24 114.4 75 74.7
HPP92_020719 Vanilla planifolia HOM05D002306 ORTHO05D006484 2.8e-23 112.1 98 58.2
AUR62019413 Chenopodium quinoa HOM05D002306 ORTHO05D006484 4.7e-23 111.3 74 75.7
BcaC01g06216 Brassica carinata HOM05D002306 ORTHO05D006484 5.2e-22 107.8 79 64.6
C03p18020 Brassica napus HOM05D002306 ORTHO05D006484 5.2e-22 107.8 79 64.6
BolC3t14207H Brassica oleracea HOM05D002306 ORTHO05D006484 5.2e-22 107.8 79 64.6
Glyma.14G131800 Glycine max HOM05D002306 ORTHO05D006484 2.0e-21 105.9 80 68.8
THA.LOC104803913 Tarenaya hassleriana HOM05D002306 ORTHO05D006484 2.0e-21 105.9 75 69.3
CSS0003606 Camellia sinensis var. sinensis HOM05D002306 ORTHO05D006484 1.3e-20 103.2 81 66.7
SGA_v2.0_scaffold192G40528 Striga asiatica HOM05D005626 ORTHO05D007032 3.8e-20 101.7 73 72.6
Mapoly0129s0038 Marchantia polymorpha HOM05D002306 ORTHO05D006484 1.1e-19 100.1 79 62.0
Pp3c15_21670 Physcomitrium patens HOM05D002306 ORTHO05D006484 1.1e-19 100.1 78 65.4
SMO351G0263 Selaginella moellendorffii HOM05D002306 ORTHO05D006484 4.1e-19 98.2 78 64.1
Dinv35345 Davidia involucrata HOM05D002306 ORTHO05D006484 5.4e-19 97.8 78 66.7
AagrBONN_evm.TU.Sc2ySwM_228.5884 Anthoceros agrestis HOM05D002306 ORTHO05D006484 2.3e-17 92.4 77 62.3
AagrBONN_evm.TU.Sc2ySwM_228.5887 Anthoceros agrestis HOM05D002306 ORTHO05D006484 2.5e-16 89.0 85 56.5
Ciclev10023204m.g Citrus clementina HOM05D002306 ORTHO05D006484 1.4e-14 83.2 57 70.2
Rhsim09G0206300 Rhododendron simsii HOM05D002306 ORTHO05D006484 5.2e-14 81.3 62 67.7
Os02g0306250 Oryza sativa ssp. japonica HOM05D002306 ORTHO05D006484 6.9e-14 80.9 56 69.6
Os08g0534400 Oryza sativa ssp. japonica HOM05D002306 ORTHO05D006484 6.9e-14 80.9 56 69.6
BcaB01g04219 Brassica carinata HOM05D002306 ORTHO05D006484 4.4e-13 78.2 83 51.8
CBR_g50381 Chara braunii HOM05D002306 ORTHO05D006484 4.4e-13 78.2 86 46.5
Zm00001eb152100 Zea mays HOM05D002306 ORTHO05D006484 8.4e-12 73.9 51 66.7
Glyma.14G130501 Glycine max HOM05D002306 ORTHO05D006484 9.6e-08 60.5 40 72.5


User provided reference genes

Program Settings