Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G02610 Aquilegia oxysepala HOM05D003979 ORTHO05D005530 0.0e+00 1230.3 615 100.0
Aqoxy2G03779 Aquilegia oxysepala HOM05D003979 ORTHO05D005530 0.0e+00 1194.9 616 97.6
TAR365G0531 Trochodendron aralioides HOM05D003979 ORTHO05D005530 4.3e-291 1004.2 568 87.3
Nn1g03146 Nelumbo nucifera HOM05D003979 ORTHO05D005530 1.5e-288 995.7 558 87.5
CSS0040719 Camellia sinensis var. sinensis HOM05D003979 ORTHO05D005530 2.2e-287 991.9 591 82.2
Actinidia34623 Actinidia chinensis HOM05D003979 ORTHO05D005530 3.8e-287 991.1 558 87.3
MSTRG.24631 Avicennia marina HOM05D003979 ORTHO05D005530 6.5e-287 990.3 583 83.7
Solyc12g043020.2 Solanum lycopersicum HOM05D003979 ORTHO05D005530 8.4e-287 989.9 623 80.4
CSS0027237 Camellia sinensis var. sinensis HOM05D003979 ORTHO05D005530 1.1e-286 989.6 591 82.1
Sopen12g022260 Solanum pennellii HOM05D003979 ORTHO05D005530 1.1e-286 989.6 621 80.8
Dinv38268 Davidia involucrata HOM05D003979 ORTHO05D005530 1.4e-286 989.2 605 82.1
PGSC0003DMG400019163 Solanum tuberosum HOM05D003979 ORTHO05D005530 9.3e-286 986.5 558 86.0
Actinidia35951 Actinidia chinensis HOM05D003979 ORTHO05D005530 1.6e-285 985.7 603 81.8
Migut.N00344 Erythranthe guttata HOM05D003979 ORTHO05D005530 1.6e-285 985.7 615 80.2
Cc03_g07310 Coffea canephora HOM05D003979 ORTHO05D005530 3.5e-285 984.6 599 81.1
Solyc05g053540.3 Solanum lycopersicum HOM05D003979 ORTHO05D005530 1.0e-284 983.0 593 82.0
TAR624G0299 Trochodendron aralioides HOM05D003979 ORTHO05D005530 3.9e-284 981.1 552 88.0
AUR62020350 Chenopodium quinoa HOM05D003979 ORTHO05D005530 5.1e-284 980.7 592 81.8
HanXRQChr14g0435331 Helianthus annuus HOM05D003979 ORTHO05D005530 5.1e-284 980.7 619 79.0
PSO017G0981 Papaver somniferum HOM05D003979 ORTHO05D005530 5.1e-284 980.7 562 85.4
Sopen05g032060 Solanum pennellii HOM05D003979 ORTHO05D005530 8.7e-284 979.9 558 85.7
PSO063G3024 Papaver somniferum HOM05D003979 ORTHO05D005530 1.5e-283 979.2 573 83.9
Cfa014896 Carpinus fangiana HOM05D003979 ORTHO05D005530 1.9e-283 978.8 606 80.9
Hund24848 Selenicereus undatus HOM05D003979 ORTHO05D005530 1.9e-283 978.8 558 85.1
Cc02_g25590 Coffea canephora HOM05D003979 ORTHO05D005530 3.3e-283 978.0 558 84.9
AUR62015873 Chenopodium quinoa HOM05D003979 ORTHO05D005530 2.1e-282 975.3 592 81.4
Medtr2g089340 Medicago truncatula HOM05D003979 ORTHO05D005530 4.8e-282 974.2 580 82.2
CiPaw.02G067900 Carya illinoinensis HOM05D003979 ORTHO05D005530 6.3e-282 973.8 579 83.4
Ciclev10004565m.g Citrus clementina HOM05D003979 ORTHO05D005530 6.3e-282 973.8 597 81.1
HanXRQChr02g0059571 Helianthus annuus HOM05D003979 ORTHO05D005530 6.3e-282 973.8 557 85.1
arahy.Tifrunner.gnm1.ann1.ZGF32Z Arachis hypogaea HOM05D003979 ORTHO05D005530 1.4e-281 972.6 605 79.2
Hma1.2p1_0691F.1_g204250 Hydrangea macrophylla HOM05D003979 ORTHO05D005530 1.4e-281 972.6 625 79.2
Potri.003G176600 Populus trichocarpa HOM05D003979 ORTHO05D005530 1.4e-281 972.6 558 85.3
CANSAT78G1204 Cannabis sativa HOM05D003979 ORTHO05D005530 1.8e-281 972.2 584 82.4
ECA233G3228 Erigeron canadensis HOM05D003979 ORTHO05D005530 1.8e-281 972.2 587 81.1
Glyma.13G207900 Glycine max HOM05D003979 ORTHO05D005530 4.1e-281 971.1 580 82.1
Lsat_1_v5_gn_6_63381 Lactuca sativa HOM05D003979 ORTHO05D005530 4.1e-281 971.1 557 84.4
Prupe.1G003100 Prunus persica HOM05D003979 ORTHO05D005530 9.0e-281 969.9 569 83.3
Peaxi162Scf00073g02029 Petunia axillaris HOM05D003979 ORTHO05D005530 1.2e-280 969.5 566 84.3
Phvul.006G152700 Phaseolus vulgaris HOM05D003979 ORTHO05D005530 2.6e-280 968.4 592 80.9
PGR031G0232 Punica granatum HOM05D003979 ORTHO05D005530 3.4e-280 968.0 603 79.1
RcHm_v2.0_Chr1g0328531 Rosa chinensis HOM05D003979 ORTHO05D005530 4.5e-280 967.6 598 79.8
Duzib212G0229 Durio zibethinus HOM05D003979 ORTHO05D005530 5.9e-280 967.2 617 79.4
Gorai.005G035200 Gossypium raimondii HOM05D003979 ORTHO05D005530 5.9e-280 967.2 615 78.5
MELO3C006331.2 Cucumis melo HOM05D003979 ORTHO05D005530 7.6e-280 966.8 586 81.1
MD04G1003600 Malus domestica HOM05D003979 ORTHO05D005530 7.6e-280 966.8 600 80.5
CAN.G765.2 Capsicum annuum HOM05D003979 ORTHO05D005530 1.0e-279 966.5 566 84.1
DCAR_031519 Daucus carota HOM05D003979 ORTHO05D005530 1.0e-279 966.5 603 80.6
Psat1g182280 Pisum sativum HOM05D003979 ORTHO05D005530 1.0e-279 966.5 558 83.9
Potri.001G051700 Populus trichocarpa HOM05D003979 ORTHO05D005530 1.0e-279 966.5 624 77.6
Gohir.A02G024400 Gossypium hirsutum HOM05D003979 ORTHO05D005530 1.3e-279 966.1 617 78.8
FAN10G0585 Fragaria x ananassa HOM05D003979 ORTHO05D005530 2.2e-279 965.3 558 84.4
Ca_00636_v3 Cicer arietinum L. HOM05D003979 ORTHO05D005530 3.8e-279 964.5 586 81.1
Ca_29705_v3 Cicer arietinum L. HOM05D003979 ORTHO05D005530 3.8e-279 964.5 586 81.1
FAN01G2046 Fragaria x ananassa HOM05D003979 ORTHO05D005530 3.8e-279 964.5 558 84.4
FvH4_7g04190 Fragaria vesca HOM05D003979 ORTHO05D005530 6.5e-279 963.8 576 82.1
Thecc.04G210300 Theobroma cacao HOM05D003979 ORTHO05D005530 6.5e-279 963.8 615 78.7
COL.COLO4_20310 Corchorus olitorius HOM05D003979 ORTHO05D005530 8.5e-279 963.4 617 79.1
FAN06G4745 Fragaria x ananassa HOM05D003979 ORTHO05D005530 1.1e-278 963.0 558 84.2
CsaV3_3G011200 Cucumis sativus L. HOM05D003979 ORTHO05D005530 1.4e-278 962.6 586 80.5
Lj6g0025731 Lotus japonicus HOM05D003979 ORTHO05D005530 2.5e-278 961.8 597 78.7
VMungo0540G1831 Vigna mungo HOM05D003979 ORTHO05D005530 2.5e-278 961.8 577 81.8
ClCG05G003530 Citrullus lanatus HOM05D003979 ORTHO05D005530 3.2e-278 961.4 622 78.0
Duzib151G0303 Durio zibethinus HOM05D003979 ORTHO05D005530 3.2e-278 961.4 575 81.9
Gohir.D02G031700 Gossypium hirsutum HOM05D003979 ORTHO05D005530 4.2e-278 961.1 615 78.0
Sed0009934 Sechium edule HOM05D003979 ORTHO05D005530 4.2e-278 961.1 624 77.4
Sabra01G0036200 Salix brachista HOM05D003979 ORTHO05D005530 5.5e-278 960.7 558 83.9
ATR0787G169 Amborella trichopoda HOM05D003979 ORTHO05D005530 1.2e-277 959.5 581 81.8
Manes.15G050825 Manihot esculenta HOM05D003979 ORTHO05D005530 2.1e-277 958.7 558 84.2
Ah.04g166150 Amaranthus hybridus HOM05D003979 ORTHO05D005530 2.7e-277 958.4 568 82.7
Sc25g0005860 Simmondsia chinensis HOM05D003979 ORTHO05D005530 3.6e-277 958.0 580 81.7
Carub.0003s2458 Capsella rubella HOM05D003979 ORTHO05D005530 4.6e-277 957.6 601 79.7
QL07p012465 Quercus lobata HOM05D003979 ORTHO05D005530 4.6e-277 957.6 586 80.7
Lalb_Chr18g0056121 Lupinus albus HOM05D003979 ORTHO05D005530 6.1e-277 957.2 558 82.6
RhsimUnG0135800 Rhododendron simsii HOM05D003979 ORTHO05D005530 1.0e-276 956.4 591 80.9
AL3G39610 Arabidopsis lyrata HOM05D003979 ORTHO05D005530 1.8e-276 955.7 601 79.5
AT3G23940 Arabidopsis thaliana HOM05D003979 ORTHO05D005530 1.8e-276 955.7 600 79.8
CiPaw.01G125500 Carya illinoinensis HOM05D003979 ORTHO05D005530 5.1e-276 954.1 594 80.0
Haze_11573 Corylus avellana HOM05D003979 ORTHO05D005530 5.1e-276 954.1 614 78.3
Duzib268G0146 Durio zibethinus HOM05D003979 ORTHO05D005530 6.7e-276 953.7 622 77.7
CARHR100330 Cardamine hirsuta HOM05D003979 ORTHO05D005530 1.1e-275 953.0 588 80.3
Thhalv10002451m.g Eutrema salsugineum HOM05D003979 ORTHO05D005530 1.1e-275 953.0 597 79.1
Os08g0559600 Oryza sativa ssp. japonica HOM05D003979 ORTHO05D005530 4.3e-275 951.0 566 82.0
EL10Ac4g07703 Beta vulgaris HOM05D003979 ORTHO05D005530 1.6e-274 949.1 616 77.1
C01p39410 Brassica napus HOM05D003979 ORTHO05D005530 1.6e-274 949.1 601 78.9
BolC1t03890H Brassica oleracea HOM05D003979 ORTHO05D005530 1.6e-274 949.1 601 78.9
BcaB04g20393 Brassica carinata HOM05D003979 ORTHO05D005530 4.8e-274 947.6 581 80.7
Zm00001eb175970 Zea mays HOM05D003979 ORTHO05D005530 6.3e-274 947.2 558 82.3
Oeu022336.1 Olea europaea HOM05D003979 ORTHO05D005530 8.2e-274 946.8 577 81.5
Zm00001eb039310 Zea mays HOM05D003979 ORTHO05D005530 1.4e-273 946.0 558 82.1
A07p08130 Brassica napus HOM05D003979 ORTHO05D005530 3.1e-273 944.9 558 83.0
BraA07t28596Z Brassica rapa HOM05D003979 ORTHO05D005530 3.1e-273 944.9 558 83.0
Nitab4.5_0001769g0010 Nicotiana tabacum HOM05D003979 ORTHO05D005530 3.1e-273 944.9 568 82.4
Aa31LG8G10930 Aethionema arabicum HOM05D003979 ORTHO05D005530 4.1e-273 944.5 557 82.9
Sp3g22010 Schrenkiella parvula HOM05D003979 ORTHO05D005530 4.1e-273 944.5 577 81.1
BraA01t03222Z Brassica rapa HOM05D003979 ORTHO05D005530 6.9e-273 943.7 595 78.7
BcaB06g26604 Brassica carinata HOM05D003979 ORTHO05D005530 9.1e-273 943.3 603 78.1
THA.LOC104804817 Tarenaya hassleriana HOM05D003979 ORTHO05D005530 1.5e-272 942.6 558 82.6
BcaC06g35668 Brassica carinata HOM05D003979 ORTHO05D005530 2.6e-272 941.8 558 82.8
C07p12270 Brassica napus HOM05D003979 ORTHO05D005530 2.6e-272 941.8 558 82.8
THA.LOC104808724 Tarenaya hassleriana HOM05D003979 ORTHO05D005530 2.6e-272 941.8 558 82.3
MBI07_g21060_MAGBIO Magnolia biondii HOM05D003979 ORTHO05D005530 3.4e-272 941.4 663 73.6
A01p30940 Brassica napus HOM05D003979 ORTHO05D005530 1.0e-271 939.9 600 78.3
Cpa.g.sc59.101 Carica papaya HOM05D003979 ORTHO05D005530 1.0e-271 939.9 573 81.2
AUR62017196 Chenopodium quinoa HOM05D003979 ORTHO05D005530 1.9e-270 935.6 575 79.8
RhsimUnG0180900 Rhododendron simsii HOM05D003979 ORTHO05D005530 2.5e-270 935.3 635 75.3
BolC7t41694H Brassica oleracea HOM05D003979 ORTHO05D005530 6.1e-269 930.6 572 80.6
arahy.Tifrunner.gnm1.ann1.NX1XST Arachis hypogaea HOM05D003979 ORTHO05D005530 2.3e-268 928.7 610 76.2
GSVIVG01029073001 Vitis vinifera HOM05D003979 ORTHO05D005530 1.3e-266 922.9 527 84.8
Pp3c11_18700 Physcomitrium patens HOM05D003979 ORTHO05D005530 1.1e-265 919.8 558 79.0
Hund11465 Selenicereus undatus HOM05D003979 ORTHO05D005530 1.5e-264 916.0 555 80.4
Peaxi162Scf00536g00915 Petunia axillaris HOM05D003979 ORTHO05D005530 2.3e-260 902.1 558 80.8
SMO361G0245 Selaginella moellendorffii HOM05D003979 ORTHO05D005530 8.8e-260 900.2 593 74.5
Mapoly0044s0128 Marchantia polymorpha HOM05D003979 ORTHO05D005530 1.8e-257 892.5 557 75.4
AUR62010687 Chenopodium quinoa HOM05D003979 ORTHO05D005530 2.4e-257 892.1 558 78.7
Gohir.D10G144500 Gossypium hirsutum HOM05D003979 ORTHO05D005530 5.0e-255 884.4 548 81.4
Nitab4.5_0001066g0080 Nicotiana tabacum HOM05D003979 ORTHO05D005530 2.7e-253 878.6 575 77.6
CBR_g16971 Chara braunii HOM05D003979 ORTHO05D005530 1.4e-252 876.3 559 75.7
HPP92_025762 Vanilla planifolia HOM05D003979 ORTHO05D005530 3.3e-251 871.7 527 80.3
SGA_v2.0_scaffold31G12595 Striga asiatica HOM05D003979 ORTHO05D005530 3.7e-250 868.2 539 79.4
Lj6C614G9 Lonicera japonica HOM05D003979 ORTHO05D005530 2.8e-242 842.0 568 75.5
MCO11G076 Micromonas commoda HOM05D003979 ORTHO05D005530 9.5e-238 827.0 557 70.9
Cre03.g206600 Chlamydomonas reinhardtii HOM05D003979 ORTHO05D005530 4.4e-235 818.1 565 70.3
TWI09G0393 Tripterygium wilfordii HOM05D003979 ORTHO05D005530 7.5e-235 817.4 624 67.1
Gorai.011G161400 Gossypium raimondii HOM05D003979 ORTHO05D005530 2.7e-232 808.9 604 70.7
SMO361G0819 Selaginella moellendorffii HOM05D003979 ORTHO05D005530 1.2e-221 773.5 490 77.8
AagrBONN_evm.TU.Sc2ySwM_228.3337 Anthoceros agrestis HOM05D003979 ORTHO05D005530 2.0e-216 756.1 479 77.0
PRCOL_00005867 Prasinoderma coloniale HOM05D003979 ORTHO05D005530 8.6e-215 750.7 544 66.4
unitig_899.g15534 Utricularia gibba HOM05D003979 ORTHO05D005530 1.1e-214 750.4 490 77.1
CDE04G1626 Ceratophyllum demersum HOM05D003979 ORTHO05D005530 1.7e-210 736.5 433 84.1
QL06p023475 Quercus lobata HOM05D003979 ORTHO05D005530 6.4e-210 734.6 459 80.2
HPP92_025735 Vanilla planifolia HOM05D003979 ORTHO05D005530 2.3e-207 726.1 490 75.7
Gohir.A10G121600 Gossypium hirsutum HOM05D003979 ORTHO05D005530 2.1e-205 719.5 426 83.3
Cfa024863 Carpinus fangiana HOM05D003979 ORTHO05D005530 8.9e-204 714.1 562 62.3
SEGI_04002 Sequoiadendron giganteum HOM05D003979 ORTHO05D005530 2.9e-202 709.1 433 79.9
HPP92_025731 Vanilla planifolia HOM05D003979 ORTHO05D005530 2.4e-201 706.1 422 81.5
vmacro00507 Vaccinium macrocarpon HOM05D003979 ORTHO05D005530 5.8e-187 658.3 403 81.1
Atru.chr4.1774 Acer truncatum HOM05D003979 ORTHO05D005530 1.3e-170 604.0 433 71.8
Cfa023757 Carpinus fangiana HOM05D003979 ORTHO05D005530 1.7e-162 577.0 572 51.4
Eucgr.H02826 Eucalyptus grandis HOM05D003979 ORTHO05D005530 5.0e-154 548.9 312 86.2
QL07p030448 Quercus lobata HOM05D003979 ORTHO05D000106 1.3e-138 497.7 384 68.8
Eucgr.C02488 Eucalyptus grandis HOM05D003979 ORTHO05D005530 2.0e-123 447.2 339 71.7
HanXRQChr14g0435341 Helianthus annuus HOM05D003979 ORTHO05D005530 2.4e-116 423.7 289 73.0
Manes.03G150102 Manihot esculenta HOM05D003979 ORTHO05D005530 2.9e-101 373.6 277 66.8
TPR.G30672 Trifolium pratense HOM05D003979 ORTHO05D005530 7.8e-91 339.0 216 76.9
CAN.G12.22 Capsicum annuum HOM05D003979 ORTHO05D005530 4.6e-75 286.6 184 78.3
vmacro00506 Vaccinium macrocarpon HOM05D003979 ORTHO05D005530 6.6e-74 282.7 209 71.3
Cfa023448 Carpinus fangiana HOM05D003979 ORTHO05D123299 2.0e-70 271.2 560 32.1
Eucgr.H02825 Eucalyptus grandis HOM05D003979 ORTHO05D015566 5.1e-66 256.5 150 82.0
Cfa020039 Carpinus fangiana HOM05D003979 ORTHO05D015566 1.3e-56 225.3 131 81.7
Duzib268G0265 Durio zibethinus HOM05D003979 ORTHO05D015566 4.8e-56 223.4 133 77.4
QL07p012436 Quercus lobata HOM05D003979 ORTHO05D005530 3.4e-54 217.2 126 81.0
Oeu022341.1 Olea europaea HOM05D003979 ORTHO05D049433 9.7e-49 199.1 186 59.7
Lsat_1_v5_gn_4_162440 Lactuca sativa HOM05D003979 ORTHO05D015566 2.8e-48 197.6 109 88.1
PGSC0003DMG400028636 Solanum tuberosum HOM05D003979 ORTHO05D015566 8.2e-48 196.1 115 80.0
QL06p023466 Quercus lobata HOM05D003979 ORTHO05D015566 2.4e-47 194.5 114 79.8
THA.LOC104809102 Tarenaya hassleriana HOM05D003979 ORTHO05D049433 1.2e-46 192.2 116 82.8
Gorai.005G140500 Gossypium raimondii HOM05D003979 ORTHO05D005530 8.5e-45 186.0 139 67.6
Gohir.D02G124900 Gossypium hirsutum HOM05D003979 ORTHO05D005530 3.2e-44 184.1 105 81.9
Eucgr.C02482 Eucalyptus grandis HOM05D003979 ORTHO05D015566 2.7e-43 181.0 115 73.9
CDE04G0146 Ceratophyllum demersum HOM05D003979 ORTHO05D005530 6.3e-40 169.9 140 64.3
Oeu006718.2 Olea europaea HOM05D003979 ORTHO05D005530 6.9e-39 166.4 252 44.8
TPR.G30661 Trifolium pratense HOM05D003979 ORTHO05D005530 1.1e-36 159.1 205 48.3
TWI36G0080 Tripterygium wilfordii HOM05D003979 ORTHO05D005530 2.0e-33 148.3 108 70.4
Lsat_1_v5_gn_5_133441 Lactuca sativa HOM05D003979 ORTHO05D015566 2.5e-28 131.3 117 59.8
CAN.G12.21 Capsicum annuum HOM05D003979 ORTHO05D015566 5.2e-26 123.6 61 93.4
CAN.G12.20 Capsicum annuum HOM05D003979 ORTHO05D015566 3.1e-23 114.4 70 74.3
TPR.G35859 Trifolium pratense HOM05D003979 ORTHO05D015566 5.5e-20 103.6 56 91.1
SMO361G0618 Selaginella moellendorffii HOM05D003979 ORTHO05D015566 6.1e-19 100.1 212 34.4
HPP92_025734 Vanilla planifolia HOM05D003979 ORTHO05D005530 4.1e-15 87.4 75 62.7
Aqoxy226s001 Aquilegia oxysepala HOM05D004107 ORTHO05D004738 7.0e-15 86.7 180 30.0
TAR362G1054 Trochodendron aralioides HOM05D000447 ORTHO05D000315 3.8e-13 80.9 67 59.7
unitig_899.g15535 Utricularia gibba HOM05D003979 ORTHO05D005530 3.6e-11 74.3 53 69.8


User provided reference genes

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