Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 0.0e+00 1255.7 626 100.0
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 2.5e-286 988.4 627 77.7
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 5.6e-286 987.3 629 77.3
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 1.7e-279 965.7 628 73.7
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 5.6e-278 960.7 627 76.2
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 7.3e-278 960.3 629 75.0
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 1.4e-276 956.1 633 72.7
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 4.9e-274 947.6 592 77.4
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 1.9e-273 945.7 674 69.9
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 2.8e-269 931.8 625 72.5
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 6.2e-269 930.6 630 71.1
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 8.9e-268 926.8 627 71.0
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 2.0e-267 925.6 630 72.1
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 4.4e-267 924.5 630 71.1
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 5.8e-267 924.1 630 71.1
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 9.9e-267 923.3 630 72.5
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 1.4e-265 919.5 630 70.8
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 2.4e-265 918.7 625 71.5
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 3.2e-265 918.3 631 70.5
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 1.6e-264 916.0 627 70.8
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 3.5e-264 914.8 630 71.1
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 3.5e-264 914.8 629 70.4
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 1.0e-263 913.3 601 75.4
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 1.0e-263 913.3 629 70.6
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 1.3e-263 912.9 627 71.6
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 3.0e-263 911.8 633 70.3
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 1.1e-262 909.8 622 69.0
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 5.6e-262 907.5 622 70.7
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 2.8e-261 905.2 630 69.8
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 8.1e-261 903.7 631 70.2
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 1.8e-260 902.5 625 70.9
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 5.2e-260 901.0 628 70.7
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 5.2e-260 901.0 620 69.0
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 1.7e-258 896.0 630 69.8
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 4.9e-258 894.4 616 69.5
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 1.4e-257 892.9 620 68.5
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 1.9e-257 892.5 616 68.7
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 2.4e-257 892.1 630 69.8
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 4.2e-257 891.3 628 68.2
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 7.1e-257 890.6 627 69.7
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 1.2e-256 889.8 624 68.4
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 2.1e-256 889.0 622 69.5
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 2.7e-256 888.6 618 68.0
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 3.5e-256 888.3 610 71.0
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 3.5e-256 888.3 617 68.9
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 3.5e-256 888.3 656 68.6
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 7.8e-256 887.1 622 69.1
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 1.3e-255 886.3 629 68.0
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 1.7e-255 885.9 623 69.3
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 6.6e-255 884.0 628 70.2
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.9e-254 882.5 630 68.6
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 1.9e-254 882.5 607 70.7
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 1.9e-254 882.5 633 68.9
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 5.6e-254 880.9 630 68.7
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 2.1e-253 879.0 644 67.1
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 4.8e-253 877.9 621 67.6
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 2.6e-251 872.1 574 73.5
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 1.7e-250 869.4 633 68.2
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 2.9e-250 868.6 606 71.8
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 2.1e-248 862.4 631 67.2
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 2.7e-248 862.1 634 66.7
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 6.0e-248 860.9 629 67.4
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 5.1e-247 857.8 625 69.1
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 1.6e-245 852.8 624 66.0
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 1.8e-244 849.4 597 70.7
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 7.6e-243 844.0 665 65.0
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 9.9e-243 843.6 627 66.5
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 1.7e-242 842.8 611 66.8
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 1.4e-241 839.7 628 67.7
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 3.5e-240 835.1 624 66.0
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 6.0e-240 834.3 623 66.1
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 5.1e-239 831.2 626 66.5
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 1.3e-237 826.6 623 66.0
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 2.1e-237 825.9 572 70.3
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 1.5e-235 819.7 628 65.8
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 5.8e-235 817.8 622 65.6
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 7.6e-235 817.4 587 68.3
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 2.1e-232 809.3 627 63.3
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 1.1e-230 803.5 632 63.1
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 4.3e-230 801.6 624 63.5
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 5.7e-230 801.2 590 66.6
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 2.5e-225 785.8 624 61.9
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 7.2e-225 784.3 624 62.0
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 6.1e-224 781.2 626 62.5
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 6.1e-224 781.2 626 62.5
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 3.9e-223 778.5 628 63.4
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 3.1e-220 768.8 630 60.5
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 5.7e-214 748.0 565 64.6
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 1.4e-212 743.4 595 61.8
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 1.3e-210 736.9 631 58.2
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 1.0e-194 684.1 440 76.1
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.0e-191 674.1 487 67.8
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 1.3e-189 667.2 452 73.2
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 3.1e-188 662.5 619 53.5
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 7.2e-185 651.4 416 76.0
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 8.8e-183 644.4 451 69.6
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 1.6e-176 623.6 640 50.2
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 1.8e-167 593.6 398 72.4
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 5.8e-158 562.0 597 49.6
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.9e-148 530.4 399 65.4
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 5.4e-148 528.9 625 45.4
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 7.3e-145 518.5 420 62.4
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 7.9e-123 445.3 442 56.8
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 1.0e-122 444.9 608 43.3
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 3.6e-107 393.3 770 32.9
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 9.1e-103 378.6 269 69.9
Os12g0528300 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D008831 2.8e-51 207.6 167 58.7
BcaB01g05249 Brassica carinata HOM05D002762 ORTHO05D008831 1.1e-50 205.7 174 56.3
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 1.1e-42 179.1 214 43.9
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 2.6e-41 174.5 149 56.4
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 3.5e-38 164.1 164 54.3
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 1.1e-28 132.5 80 76.2
VMungo1215G0498 Vigna mungo HOM05D002762 ORTHO05D008831 1.0e-21 109.4 87 65.5
FAN17G1900 Fragaria x ananassa HOM05D002762 ORTHO05D030920 1.3e-16 92.4 82 54.9
COL.COLO4_28661 Corchorus olitorius HOM05D002762 ORTHO05D008831 7.9e-14 83.2 88 52.3
Glyma.07G254400 Glycine max HOM05D002762 ORTHO05D004643 4.9e-08 63.9 47 66.0
TWI09G1537 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 4.2e-07 60.8 42 66.7
MD13G1179000 Malus domestica HOM05D002762 ORTHO05D030920 5.5e-07 60.5 38 65.8


User provided reference genes

Program Settings