Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 9.4e-191 670.2 392 100.0
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 8.4e-115 417.9 331 72.2
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 6.5e-107 391.7 331 64.7
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 1.9e-106 390.2 301 66.8
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 2.5e-106 389.8 303 66.7
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 1.6e-105 387.1 296 68.9
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 2.1e-105 386.7 331 66.8
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 2.1e-105 386.7 286 69.9
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 2.7e-105 386.3 302 65.2
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 3.6e-105 386.0 331 67.4
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 3.6e-105 386.0 286 72.0
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 7.9e-105 384.8 301 65.1
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 1.1e-103 380.9 299 68.6
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 1.5e-103 380.6 301 64.5
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 1.9e-103 380.2 331 65.3
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 4.3e-103 379.0 338 66.0
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 1.3e-102 377.5 314 73.6
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 2.8e-102 376.3 374 65.2
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 3.7e-102 375.9 299 67.2
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 4.8e-102 375.6 330 67.3
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 8.2e-102 374.8 290 66.9
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 1.1e-101 374.4 337 65.6
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 5.3e-101 372.1 324 65.4
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 1.2e-100 370.9 327 67.0
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 1.2e-100 370.9 357 64.7
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 2.0e-100 370.2 303 65.0
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 4.5e-100 369.0 297 67.0
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 1.0e-99 367.9 336 64.6
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 1.7e-99 367.1 323 65.3
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 2.2e-99 366.7 298 64.8
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 2.9e-99 366.3 304 65.5
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 2.9e-99 366.3 326 64.4
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 3.8e-99 365.9 322 65.2
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 3.8e-99 365.9 322 65.2
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 3.8e-99 365.9 333 63.1
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 6.5e-99 365.2 304 66.1
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 8.5e-99 364.8 359 63.2
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 3.2e-98 362.8 329 64.7
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 1.6e-97 360.5 285 69.1
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 3.6e-97 359.4 302 65.2
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 3.6e-97 359.4 260 65.8
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 4.6e-97 359.0 325 61.2
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 7.9e-97 358.2 273 75.1
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 3.9e-96 355.9 340 57.9
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 5.1e-96 355.5 277 75.5
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 1.1e-95 354.4 334 60.8
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 4.4e-95 352.4 292 61.6
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 4.4e-95 352.4 316 63.0
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 5.7e-95 352.1 347 64.0
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 7.4e-95 351.7 301 63.1
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 2.2e-94 350.1 317 64.4
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 2.8e-94 349.7 291 64.9
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 2.8e-94 349.7 291 63.9
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 3.7e-94 349.4 290 64.1
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 4.8e-94 349.0 332 61.7
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 1.1e-93 347.8 235 75.7
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 1.1e-93 347.8 280 78.9
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 1.4e-93 347.4 291 63.6
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 2.4e-93 346.7 266 70.3
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 3.1e-93 346.3 302 61.6
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 6.9e-93 345.1 324 62.7
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 1.5e-92 344.0 266 68.4
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 1.5e-92 344.0 273 72.2
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 3.4e-92 342.8 289 68.9
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 1.0e-91 341.3 307 58.0
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 3.8e-91 339.3 290 69.0
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 1.4e-90 337.4 288 62.5
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 7.2e-90 335.1 305 61.3
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 9.4e-90 334.7 257 75.1
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 7.9e-89 331.6 253 72.7
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 2.8e-86 323.2 272 66.2
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 1.4e-85 320.9 343 57.1
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 4.1e-85 319.3 266 66.5
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 4.7e-81 305.8 273 67.4
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 5.7e-79 298.9 246 66.3
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 1.0e-75 288.1 234 64.1
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 6.5e-75 285.4 275 58.2
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 4.7e-73 279.3 208 69.2
Dinv24961 Davidia involucrata HOM05D007647 ORTHO05D009644 9.5e-66 255.0 203 67.5
QL03p065502 Quercus lobata HOM05D007647 ORTHO05D009644 6.1e-65 252.3 193 73.6
CDE06G0855 Ceratophyllum demersum HOM05D007647 ORTHO05D009644 1.2e-60 238.0 161 73.9
SGA_v2.0_scaffold46G17448 Striga asiatica HOM05D007647 ORTHO05D009644 5.9e-60 235.7 165 67.9
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 6.6e-59 232.3 244 55.3
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 4.3e-58 229.6 241 55.6
Psat0s2221g0040 Pisum sativum HOM05D007647 ORTHO05D009644 3.7e-54 216.5 193 64.2
Sopen05g003060 Solanum pennellii HOM05D007647 ORTHO05D009644 9.2e-53 211.8 193 60.6
Phvul.003G068801 Phaseolus vulgaris HOM05D007647 ORTHO05D009644 3.5e-52 209.9 162 70.4
Nitab4.5_0000879g0070 Nicotiana tabacum HOM05D007647 ORTHO05D009644 6.8e-48 195.7 139 70.5
Pp3c16_24380 Physcomitrium patens HOM05D007647 ORTHO05D009644 1.5e-42 177.9 245 40.0
AagrBONN_evm.TU.Sc2ySwM_344.2050 Anthoceros agrestis HOM05D007647 ORTHO05D009644 7.5e-39 165.6 233 46.8
Cpa.g.sc1007.5 Carica papaya HOM05D007647 ORTHO05D009644 3.7e-38 163.3 109 76.1
SMO275G0007 Selaginella moellendorffii HOM05D007647 ORTHO05D009644 4.9e-30 136.3 154 46.8
CSS0017739 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 1.9e-29 134.4 151 68.9
CSS0049134 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 2.4e-24 117.5 76 81.6


User provided reference genes

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